SecReT4

T4SS
References

T4SS ID	514
Strain	Asticcacaulis excentricus CB 48 plasmid pASTEX02 (NC_014819)
Replicon	plasmid pASTEX02 [Browse all T4SS(s) in this replicon]
Accession	NC_014819
Location	43117..53707; 77866..98235
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	1

The information of T4SS components from NC_014819
Region 1: 43117..53707

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Astex_3740	38602..39075 [-], 474	315500704	YD repeat-containing protein
2	Astex_3744	40837..42057 [+], 1221	315500705	transposase mutator type
3	Astex_3745	42258..42542 [-], 285	315500706	transposase IS3/IS911 family protein
4	Astex_3746	42922..43017 [+], 96	315500707	hypothetical protein
5	Astex_3747	43117..46260 [-], 3144	315500708	conjugative relaxase domain protein	TraI_F
6	Astex_3748	46260..48875 [-], 2616	315500709	hypothetical protein	TraD_F
7	Astex_3749	48895..49296 [-], 402	315500710	hypothetical protein
8	Astex_3750	50004..50387 [+], 384	315500711	hypothetical protein
9	Astex_3751	50731..50868 [-], 138	315500712	hypothetical protein
10	Astex_3752	50930..51217 [+], 288	315500713	hypothetical protein
11	Astex_3753	51888..52070 [-], 183	315500714	hypothetical protein
12	Astex_3754	52124..52531 [-], 408	315500715	single-strand binding protein
13	Astex_3755	52764..53294 [-], 531	315500716	hypothetical protein
14	Astex_3756	53447..53707 [+], 261	315500717	hypothetical protein	TraA_F
15	Astex_3757	54148..54573 [+], 426	315500718	hypothetical protein
16	Astex_3758	54788..55267 [-], 480	315500719	hypothetical protein
17	Astex_3759	55560..56039 [+], 480	315500720	GreA/GreB family elongation factor
18	Astex_3760	56118..56489 [-], 372	315500721	hypothetical protein
19	Astex_3761	56502..56924 [-], 423	315500722	Antirestriction protein
20	Astex_3762	57183..57428 [-], 246	315500723	hypothetical protein
21	Astex_3763	57443..58033 [-], 591	315500724	hypothetical protein
22	Astex_3764	58168..58551 [-], 384	315500725	transcriptional modulator of MazE/toxin, MazF

Region 2: 77866..98235

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Astex_3775	72990..73676 [+], 687	315500735	partition protein ParA
2	Astex_3776	73687..73998 [+], 312	315500736	hypothetical protein
3	Astex_3777	74792..75997 [+], 1206	315500737	Replication initiator protein A
4	Astex_3778	76229..77497 [-], 1269	315500738	replication protein C
5	Astex_3779	77866..78678 [-], 813	315500739	hypothetical protein	Orf169_F
6	Astex_3780	78719..79084 [-], 366	315500740	hypothetical protein
7	Astex_3781	79232..79762 [-], 531	315500741	hypothetical protein
8	Astex_3782	80149..80454 [+], 306	315500742	hypothetical protein
9	Astex_3783	80610..80891 [+], 282	315500743	type IV conjugative transfer system protein TraL	TraL_F
10	Astex_3784	80892..81491 [+], 600	315500744	hypothetical protein	TraE_F
11	Astex_3785	81497..82207 [+], 711	315500745	TraK family protein	TraK_F
12	Astex_3786	82207..83535 [+], 1329	315500746	conjugation TrbI family protein	TraB_F
13	Astex_3787	83544..84350 [+], 807	315500747	disulfide bond isomerase, DsbC/G-like protein
14	Astex_3788	84343..84789 [+], 447	315500748	Type IV conjugative transfer system protein TraV	TraV_F
15	Astex_3789	84786..87533 [+], 2748	315500749	type-IV secretion system protein TraC	TraC_F
16	Astex_3790	87514..87831 [+], 318	315500750	purine-cytosine permease-like transporter
17	Astex_3791	87815..88288 [+], 474	315500751	hypothetical protein
18	Astex_3792	88272..88778 [+], 507	315500752	Peptidase S26, conserved region
19	Astex_3793	88778..89410 [+], 633	315500753	type-F conjugative transfer system protein TraW	TraW_F
20	Astex_3794	89407..90417 [+], 1011	315500754	TraU family protein	TraU_F
21	Astex_3795	90407..91138 [+], 732	315500755	type-F conjugative transfer system pilin assembly protein TrbC	TrbC_F
22	Astex_3796	91135..92958 [+], 1824	315500756	hypothetical protein	TraN_F
23	Astex_3797	92963..93886 [+], 924	315500757	TraF-like protein	TraF_F
24	Astex_3798	93898..95283 [+], 1386	315500758	TraH family protein	TraH_F
25	Astex_3799	95293..98235 [+], 2943	315500759	hypothetical protein	TraG_F
26	Astex_3800	98239..98592 [-], 354	315500760	hypothetical protein
27	Astex_3801	98728..99141 [+], 414	315500761	hypothetical protein
28	Astex_3802	99270..99677 [+], 408	315500762	hypothetical protein
29	Astex_3803	99692..99898 [-], 207	315500763	helix-turn-helix domain protein
30	Astex_3804	100071..100373 [-], 303	315500764	hypothetical protein
31	Astex_3805	100498..100938 [+], 441	315500765	transcriptional regulator, MucR family
32	Astex_3806	101123..102097 [+], 975	315500766	Exonuclease RNase T and DNA polymerase III
33	Astex_3807	102142..102414 [-], 273	315500767	histone family protein DNA-binding protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_014819