SecReT4
T4SS ID103
StrainEscherichia coli plasmid pC15-1a (NC_005327)
Repliconplasmid pC15-1a [Browse all T4SS(s) in this replicon]
AccessionNC_005327
Location49913..84029
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_005327
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pC15-1a_045 (ECs1337)45290..45715 [+], 42641056970hypothetical protein 
2pC15-1a_046 (ECs1338)45712..46062 [+], 35141056971hypothetical protein 
3pC15-1a_047 (ECs1339)46093..47706 [+], 161441056972hypothetical protein 
4pC15-1a_048 (yehA)47710..48087 [-], 37841056973YehA 
5pC15-1a_049 (yeiA)48388..48684 [+], 29741056974YeiA 
6pC15-1a_050 (32)48795..49616 [+], 82241056975hypothetical protein 
7pC15-1a_05149913..50422 [-], 51041056976lytic transglycosylase  Orf169_F
8pC15-1a_052 (traM)50838..51221 [+], 38441056977conjugal transfer protein TraM  TraM_F
9pC15-1a_053 (traJ)51415..52086 [+], 67241056978conjugal transfer transcriptional regulator TraJ 
10pC15-1a_054 (traY)52223..52450 [+], 22841056979conjugal transfer protein TraY  TraY_F
11pC15-1a_055 (traA)52483..52842 [+], 36041056980conjugal transfer pilin subunit TraA  TraA_F
12pC15-1a_056 (traL)52857..53168 [+], 31241056981conjugal transfer pilus assembly protein TraL  TraL_F
13pC15-1a_057 (traE)53190..53756 [+], 56741056982conjugal transfer pilus assembly protein TraE  TraE_F
14pC15-1a_058 (traK)53743..54471 [+], 72941056983conjugal transfer protein TraK  TraK_F
15pC15-1a_059 (traB)54471..55922 [+], 145241056984conjugal transfer pilus assembly protein TraB  TraB_F
16pC15-1a_060 (traP)55891..56478 [+], 58841056985conjugal transfer protein TraP 
17pC15-1a_061 (trbD)56417..56785 [+], 36941056986conjugal transfer protein TrbD 
18pC15-1a_062 (traV)56782..57297 [+], 51641056987conjugal transfer protein TraV  TraV_F
19pC15-1a_063 (traR)57432..57653 [+], 22241056988conjugal transfer protein TraR 
20pC15-1a_064 (yfhA)57646..58122 [+], 47741056989YfhA 
21pC15-1a_065 (yfiB)58202..58420 [+], 21941056990YfiB 
22pC15-1a_066 (yfiC)58448..58795 [+], 34841056991YfiC 
23pC15-1a_067 (traC)58921..61551 [+], 263141056992conjugal transfer ATP-binding protein TraC  TraC_F
24pC15-1a_068 (trbI)61548..61934 [+], 38741056993conjugal transfer protein TrbI 
25pC15-1a_069 (traW)61931..62563 [+], 63341056994conjugal transfer pilus assembly protein TraW  TraW_F
26pC15-1a_070 (traU)62560..63552 [+], 99341056995conjugal transfer pilus assembly protein TraU  TraU_F
27pC15-1a_071 (ygeA)63576..63887 [+], 31241056996YgeA 
28pC15-1a_072 (trbC)63896..64534 [+], 63941056997conjugal transfer pilus assembly protein TrbC  TrbC_F
29pC15-1a_073 (traN)64531..66381 [+], 185141056998conjugal transfer mating pair stabilization protein TraN  TraN_F
30pC15-1a_074 (trbE)66405..66665 [+], 26141056999conjugal transfer protein TrbE 
31pC15-1a_075 (traF)66640..67401 [+], 76241057000conjugal pilus assembly protein TraF  TraF_F
32pC15-1a_076 (trbA)67415..67759 [+], 34541057001conjugal transfer protein TrbA 
33pC15-1a_077 (traQ)67878..68162 [+], 28541057002conjugal transfer pilin chaperone TraQ  TraQ_F
34pC15-1a_078 (trbB)68149..68694 [+], 54641057003conjugal transfer protein TrbB 
35pC15-1a_079 (trbJ)68624..68971 [+], 34841057004conjugal transfer protein TrbJ 
36pC15-1a_080 (trbF)68919..69344 [+], 42641057005conjugal transfer protein TrbF 
37pC15-1a_081 (traH)69322..70704 [+], 138341057006conjugal transfer pilus assembly protein TraH  TraH_F
38pC15-1a_082 (traG)70701..73523 [+], 282341057007conjugal transfer mating pair stabilization protein TraG  TraG_F
39pC15-1a_083 (traS)73545..74024 [+], 48041057008hypothetical protein 
40pC15-1a_084 (traT)74073..74804 [+], 73241057009conjugal transfer surface exclusion protein TraT 
41pC15-1a_085 (yhfA)74962..75744 [+], 78341057010YhfA 
42pC15-1a_086 (traD)75795..77993 [+], 219941057011conjugal transfer protein TraD  TraD_F
43pC15-1a_087 (traI)77993..83263 [+], 527141057012conjugal transfer nickase/helicase TraI  TraI_F
44pC15-1a_088 (traX)83283..84029 [+], 74741057013conjugal transfer pilus acetylation protein TraX  TraX_F
45pC15-1a_089 (yieA)84088..84948 [+], 86141057014YieA 
46pC15-1a_090 (finO)85051..85611 [+], 56141057015conjugal transfer fertility inhibition protein FinO 
47pC15-1a_091 (yigA)85740..85952 [+], 21341057016hypothetical protein 
48pC15-1a_092 (insA)86232..86507 [+], 27641057017hypothetical protein 
49pC15-1a_093 (insB)86426..86929 [+], 50441057018hypothetical protein 
50pC15-1a_094 (yigB)86974..87435 [+], 46241057019YigB 
51pC15-1a_095 (yihA)87728..88318 [+], 59141057020YihA 
52pC15-1a_096 (repA2)88558..88812 [+], 25541057021replication protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_005327

Genomics & Bioinformatics Group in MML, SJTU