SecReT4
T4SS ID100
StrainEscherichia coli plasmid pO86A1 (NC_008460)
Repliconplasmid pO86A1 [Browse all T4SS(s) in this replicon]
AccessionNC_008460
Location64343..97327
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_008460
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pO86A1_p083 (psiB)59926..60360 [+], 435116006866plasmid SOS inhibition protein B 
2pO86A1_p084 (psiA)60357..61076 [+], 720116006867plasmid SOS inhibition protein A 
3pO86A1_p085 (orf85)61073..61213 [+], 141116006868hypothetical protein 
4pO86A1_p086 (hok)61351..61512 [+], 162116006869post-segregation killing protein 
5pO86A1_p087 (orf87)61750..62019 [-], 270116006870hypothetical protein 
6pO86A1_p088 (orf88)62063..62299 [-], 237116006871hypothetical protein 
7pO86A1_p089 (orf89)62362..62664 [+], 303116006872hypothetical protein 
8pO86A1_p090 (orf90)62820..63107 [+], 288116006873hypothetical protein 
9pO86A1_p091 (orf91)63226..64047 [+], 822116006874hypothetical protein 
10pO86A1_p092 (orf92)64343..64852 [-], 510116006875lytic transglycosylase  Orf169_F
11pO86A1_p093 (traM)65268..65651 [+], 384116006876conjugal transfer protein TraM  TraM_F
12pO86A1_p094 (traJ)65845..66516 [+], 672116006877conjugal transfer transcriptional regulator TraJ 
13pO86A1_p095 (traY)66653..66880 [+], 228116006878conjugal transfer protein TraY  TraY_F
14pO86A1_p096 (traA)66913..67272 [+], 360116006879conjugal transfer pilin subunit TraA  TraA_F
15pO86A1_p097 (traL)67287..67598 [+], 312116006880conjugal transfer pilus assembly protein TraL  TraL_F
16pO86A1_p098 (traE)67620..68186 [+], 567116006881conjugal transfer pilus assembly protein TraE  TraE_F
17pO86A1_p099 (traK)68173..68901 [+], 729116006882conjugal transfer protein TraK  TraK_F
18pO86A1_p100 (traB)68901..70352 [+], 1452116006883conjugal transfer pilus assembly protein TraB  TraB_F
19pO86A1_p101 (traP)70342..70908 [+], 567116006884conjugal transfer protein TraP 
20pO86A1_p102 (trbD)70895..71212 [+], 318116006885conjugal transfer protein TrbD 
21pO86A1_p103 (traV)71212..71727 [+], 516116006886conjugal transfer protein TraV  TraV_F
22pO86A1_p104 (traR)71862..72083 [+], 222116006887conjugal transfer protein TraR 
23pO86A1_p105 (traC)72243..74870 [+], 2628116006888conjugal transfer ATP-binding protein TraC  TraC_F
24pO86A1_p106 (trbI)74867..75253 [+], 387116006889conjugal transfer protein TrbI 
25pO86A1_p107 (traW)75250..75882 [+], 633116006890conjugal transfer pilus assembly protein TraW  TraW_F
26pO86A1_p108 (traU)75879..76871 [+], 993116006891conjugal transfer pilus assembly protein TraU  TraU_F
27pO86A1_p109 (orf109)76895..77206 [+], 312116006892hypothetical protein 
28pO86A1_p110 (trbC)77215..77853 [+], 639116006893conjugal transfer pilus assembly protein TrbC  TrbC_F
29pO86A1_p111 (traN)77850..79700 [+], 1851116006894conjugal transfer mating pair stabilization protein TraN  TraN_F
30pO86A1_p112 (trbE)79724..79984 [+], 261116006895conjugal transfer protein TrbE 
31pO86A1_p113 (traF)79977..80720 [+], 744116006896conjugal pilus assembly protein TraF  TraF_F
32pO86A1_p114 (trbA)80736..81083 [+], 348116006897conjugal transfer protein TrbA 
33pO86A1_p115 (traQ)81202..81486 [+], 285116006898conjugal transfer pilin chaperone TraQ  TraQ_F
34pO86A1_p116 (trbB)81473..82018 [+], 546116006899conjugal transfer protein TrbB 
35pO86A1_p117 (trbJ)81948..82295 [+], 348116006900conjugal transfer protein TrbJ 
36pO86A1_p118 (trbF)82243..82668 [+], 426116006901conjugal transfer protein TrbF 
37pO86A1_p119 (traH)82652..84028 [+], 1377116006902conjugal transfer pilus assembly protein TraH  TraH_F
38pO86A1_p120 (traG)84025..86847 [+], 2823116006903conjugal transfer mating pair stabilization protein TraG  TraG_F
39pO86A1_p121 (traS)86869..87348 [+], 480116006904TraS protein 
40pO86A1_p122 (traT)87397..88128 [+], 732116006905conjugal transfer surface exclusion protein TraT 
41pO86A1_p123 (orf123)88200..88811 [+], 612116006906hypothetical protein 
42pO86A1_p124 (traD)89093..91291 [+], 2199116006907conjugal transfer protein TraD  TraD_F
43pO86A1_p125 (traI)91291..96561 [+], 5271116006908conjugal transfer nickase/helicase TraI  TraI_F
44pO86A1_p126 (traX)96581..97327 [+], 747116006909conjugal transfer pilus acetylation protein TraX  TraX_F
45pO86A1_p127 (finO)97382..97942 [+], 561116006910conjugal transfer fertility inhibition protein FinO 
46pO86A1_p128 (orf128)98074..98286 [+], 213116006911hypothetical protein 
47pO86A1_p129 (orf129)98593..100206 [-], 1614116006912putative transposase 
48pO86A1_p130 (orf130)100237..100587 [-], 351116006913putative transposase 
49pO86A1_p131 (orf131)100584..101018 [-], 435116006914putative transposase 
50pO86A1_p132 (orf132)101073..101543 [+], 471116006915hypothetical protein 
51pO86A1_p133 (orf133)101589..101798 [+], 210116006916putative regulator 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_008460

Genomics & Bioinformatics Group in MML, SJTU