SecReT4

T4SS
References

T4SS ID	598
Strain	Dechloromonas aromatica RCB
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_007298
Location	2486033..2513898
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	2	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_007298

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Daro_2299	2481474..2482232 [-], 759	71907918	hypothetical protein
2	Daro_2300	2482252..2482704 [-], 453	71907919	signal peptide protein
3	Daro_2301	2482733..2483515 [-], 783	71907920	hypothetical protein
4	Daro_2302	2483591..2484187 [-], 597	71907921	UDP-diphosphatase
5	Daro_2303	2484243..2484578 [-], 336	71907922	hypothetical protein
6	Daro_2304	2484997..2485341 [+], 345	71907923	hypothetical protein
7	Daro_2305	2485354..2485992 [+], 639	71907924	hypothetical protein
8	Daro_2306	2486033..2487748 [+], 1716	71907925	relaxase	TraI_F
9	Daro_2307	2487750..2489657 [+], 1908	71907926	hypothetical protein	TraD_F
10	Daro_2308	2489654..2490277 [+], 624	71907927	hypothetical protein
11	Daro_2309	2490479..2492479 [-], 2001	71907928	hypothetical protein
12	Daro_2310	2493062..2493559 [+], 498	71907929	hypothetical protein
13	Daro_2311	2493743..2494294 [+], 552	71907930	lytic transglycosylase, catalytic	Orf169_F
14	Daro_2312	2494291..2494968 [+], 678	71907931	OmpA/MotB
15	Daro_2313	2495100..2495450 [+], 351	71907932	hypothetical protein
16	Daro_2314	2495481..2495780 [+], 300	71907933	hypothetical protein	TraL_F
17	Daro_2315	2495798..2496364 [+], 567	71907934	plasmid-like conjugative transfer protein TraE	TraE_F
18	Daro_2316	2496351..2497226 [+], 876	71907935	hypothetical protein	TraK_F
19	Daro_2317	2497223..2498593 [+], 1371	71907936	TraB pilus assembly	TraB_F
20	Daro_2318	2498580..2499398 [+], 819	71907937	periplasmic thiol:disulfide interchange protein
21	Daro_2319	2499395..2499976 [+], 582	71907938	hypothetical protein	TraV_F
22	Daro_2320	2499984..2502551 [+], 2568	71907939	hypothetical protein	TraC_F
23	Daro_2321	2502548..2502916 [+], 369	71907940	hypothetical protein
24	Daro_2322	2502913..2503509 [+], 597	71907941	hypothetical protein
25	Daro_2323	2503520..2503888 [+], 369	71907942	hypothetical protein
26	Daro_2324	2503885..2504520 [+], 636	71907943	hypothetical protein	TraW_F
27	Daro_2325	2504517..2505545 [+], 1029	71907944	hypothetical protein	TraU_F
28	Daro_2326	2505532..2506290 [+], 759	71907945	hypothetical protein	TraW_F
29	Daro_2327	2506291..2508405 [+], 2115	71907946	conjugal transfer mating pair stabilization protein TraN	TraN_F
30	Daro_2328	2508402..2508776 [+], 375	71907947	hypothetical protein
31	Daro_2329	2508785..2509648 [+], 864	71907948	hypothetical protein	TraF_F
32	Daro_2330	2509645..2511093 [+], 1449	71907949	hypothetical protein	TraH_F
33	Daro_2331	2511127..2513898 [+], 2772	71907950	hypothetical protein	TraG_F
34	Daro_2332	2513899..2514222 [-], 324	71907951	hypothetical protein
35	Daro_2333	2514300..2515244 [-], 945	71907952	hypothetical protein
36	Daro_2334	2515241..2516320 [-], 1080	71907953	hypothetical protein
37	Daro_2335	2516317..2517126 [-], 810	71907954	hypothetical protein
38	Daro_2336	2517136..2518416 [-], 1281	71907955	Phage integrase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_007298