The information of T4SS components from NC_014107 |
| Region 1: 3511..4281 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | ECL_A001 (repA) | 1..1014 [+], 1014 | 295697840 | replication initiation protein | | |
| 2 | ECL_A002 | 1736..1897 [+], 162 | 295697841 | hypothetical protein | | |
| 3 | ECL_A003 | 1965..2771 [+], 807 | 295697842 | hypothetical protein | | |
| 4 | ECL_A004 | 2746..3075 [-], 330 | 295697843 | hypothetical protein | | |
| 5 | ECL_A005 | 3158..3496 [-], 339 | 295697844 | hypothetical protein | | |
| 6 | ECL_A006 | 3511..4281 [-], 771 | 295697845 | TraX family protein | TraX_F | |
| 7 | ECL_A007 | 4472..4594 [+], 123 | 295697846 | hypothetical protein | | |
| 8 | ECL_A008 | 4648..5172 [-], 525 | 295697847 | hypothetical protein | | |
| 9 | ECL_A009 | 5314..5574 [+], 261 | 295697848 | CopG/Arc/MetJ family transcriptional regulator | | |
| 10 | ECL_A010 | 5561..5857 [+], 297 | 295697849 | Plasmid stabilization system | | |
| 11 | ECL_A011 (pcoE) | 6077..6511 [-], 435 | 295697850 | copper-binding protein pcoE | | |
| 12 | ECL_A012 (pcoS) | 6729..7766 [-], 1038 | 295697851 | copper resistant sensor kinase PcoS | | |
| 13 | ECL_A013 | 7891..8859 [-], 969 | 295697852 | putative transposase | | |
| 14 | ECL_A014 | 8881..9195 [-], 315 | 295697853 | hypothetical protein | | |
| |
| Region 2: 95497..130881 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | ECL_A132 | 90508..90939 [-], 432 | 295697970 | hypothetical protein | | |
| 2 | ECL_A133 | 91189..91629 [+], 441 | 295697971 | hypothetical protein | | |
| 3 | ECL_A134 | 91690..92151 [+], 462 | 295697972 | hypothetical protein | | |
| 4 | ECL_A135 | 92239..92439 [+], 201 | 295697973 | hypothetical protein | | |
| 5 | ECL_A136 | 92480..93271 [+], 792 | 295697974 | hypothetical protein | | |
| 6 | ECL_A137 | 93313..93648 [+], 336 | 295697975 | hypothetical protein | | |
| 7 | ECL_A138 | 93645..93998 [+], 354 | 295697976 | hypothetical protein | | |
| 8 | ECL_A139 | 94193..94630 [+], 438 | 295697977 | hypothetical protein | | |
| 9 | ECL_A140 | 94647..95468 [+], 822 | 295697978 | hypothetical protein | | |
| 10 | ECL_A141 | 95497..95994 [-], 498 | 295697979 | lytic transglycosylase | Orf169_F | |
| 11 | ECL_A142 | 95993..96175 [+], 183 | 295697980 | hypothetical protein | | |
| 12 | ECL_A143 | 96225..96341 [-], 117 | 295697981 | hypothetical protein | | |
| 13 | ECL_A144 | 96610..97005 [+], 396 | 295697982 | hypothetical protein | TraM_F | |
| 14 | ECL_A145 | 97038..97679 [-], 642 | 295697983 | hypothetical protein | | |
| 15 | ECL_A146 | 97735..97884 [-], 150 | 295697984 | hypothetical protein | | |
| 16 | ECL_A147 | 97874..98227 [+], 354 | 295697985 | hypothetical protein | TraA_F | |
| 17 | ECL_A148 | 98231..98533 [+], 303 | 295697986 | type IV conjugative transfer system protein TraL | TraL_F | |
| 18 | ECL_A149 | 98539..99120 [+], 582 | 295697987 | type IV conjugative transfer system protein TraE | TraE_F | |
| 19 | ECL_A150 | 99132..99872 [+], 741 | 295697988 | type IV conjugative transfer system protein TraK | TraK_F | |
| 20 | ECL_A151 | 99869..101272 [+], 1404 | 295697989 | type IV conjugative transfer system protein TraB | TraB_F | |
| 21 | ECL_A152 | 101285..101524 [+], 240 | 295697990 | hypothetical protein | | |
| 22 | ECL_A153 | 101521..101805 [+], 285 | 295697991 | hypothetical protein | | |
| 23 | ECL_A154 | 101802..102242 [+], 441 | 295697992 | hypothetical protein | | |
| 24 | ECL_A155 | 102256..102744 [+], 489 | 295697993 | hypothetical protein | | |
| 25 | ECL_A156 | 102799..103029 [+], 231 | 295697994 | hypothetical protein | | |
| 26 | ECL_A157 | 103095..103637 [+], 543 | 295697995 | type IV conjugative transfer system protein TraV | TraV_F | |
| 27 | ECL_A158 | 103634..103888 [+], 255 | 295697996 | hypothetical protein | | |
| 28 | ECL_A159 | 103885..106494 [+], 2610 | 295697997 | type IV conjugative transfer system protein TraC | TraC_F | |
| 29 | ECL_A160 | 106476..106904 [+], 429 | 295697998 | type-F conjugative transfer system protein TrbI | | |
| 30 | ECL_A161 | 106901..107536 [+], 636 | 295697999 | type IV conjugative transfer system protein TraW | TraW_F | |
| 31 | ECL_A162 | 107533..107925 [+], 393 | 295698000 | hypothetical protein | | |
| 32 | ECL_A163 | 107916..108152 [+], 237 | 295698001 | hypothetical protein | | |
| 33 | ECL_A164 | 108143..109156 [+], 1014 | 295698002 | hypothetical protein | | |
| 34 | ECL_A165 | 109261..109476 [+], 216 | 295698003 | hypothetical protein | | |
| 35 | ECL_A166 | 109532..109855 [+], 324 | 295698004 | hypothetical protein | | |
| 36 | ECL_A167 | 109828..110850 [+], 1023 | 295698005 | type IV conjugative transfer system protein TraU | TraU_F | |
| 37 | ECL_A168 | 110861..111487 [+], 627 | 295698006 | conjugal transfer pilus assembly protein TrbC | TrbC_F | |
| 38 | ECL_A169 | 111484..113319 [+], 1836 | 295698007 | conjugal transfer mating pair stabilization protein TraN | TraN_F | |
| 39 | ECL_A170 | 113316..114098 [+], 783 | 295698008 | type IV conjugative transfer system protein TraF | TraF_F | |
| 40 | ECL_A171 | 114108..114599 [+], 492 | 295698009 | hypothetical protein | | |
| 41 | ECL_A172 | 114596..114814 [+], 219 | 295698010 | hypothetical protein | | |
| 42 | ECL_A173 | 114804..115412 [+], 609 | 295698011 | conjugal transfer protein TrbB | | |
| 43 | ECL_A174 | 115430..115693 [+], 264 | 295698012 | hypothetical protein | | |
| 44 | ECL_A175 | 115690..116094 [+], 405 | 295698013 | hypothetical protein | | |
| 45 | ECL_A176 | 116087..117451 [+], 1365 | 295698014 | conjugal transfer pilus assembly protein TraH | TraH_F | |
| 46 | ECL_A177 | 117451..120849 [+], 3399 | 295698015 | conjugal transfer mating pair stabilization protein TraG | TraG_F | |
| 47 | ECL_A178 | 120851..121540 [+], 690 | 295698016 | hypothetical protein | | |
| 48 | ECL_A179 | 121687..122118 [+], 432 | 295698017 | conjugal transfer surface exclusion protein TraT | | |
| 49 | ECL_A180 | 122477..122791 [+], 315 | 295698018 | hypothetical protein | | |
| 50 | ECL_A181 | 122906..125461 [+], 2556 | 295698019 | type IV conjugative transfer system coupling protein TraD | TraD_F | |
| 51 | ECL_A182 | 125458..130881 [+], 5424 | 295698020 | conjugative transfer relaxase protein TraI | TraI_F | |
| 52 | ECL_A183 | 130909..131694 [+], 786 | 295698021 | DSBA oxidoreductase | | |
| 53 | ECL_A184 | 131795..132346 [+], 552 | 295698022 | hypothetical protein | | |
| 54 | ECL_A185 | 132451..132579 [-], 129 | 295698023 | hypothetical protein | | |
| 55 | ECL_A186 | 132628..132753 [+], 126 | 295698024 | hypothetical protein | | |
| 56 | ECL_A187 | 132966..133943 [-], 978 | 295698025 | putative Integrase/recombinase | | |
| 57 | ECL_A188 | 134176..135327 [+], 1152 | 295698026 | hypothetical protein | | |
| 58 | ECL_A189 | 135388..135516 [-], 129 | 295698027 | hypothetical protein | | |
| 59 | ECL_A190 | 135562..135702 [+], 141 | 295698028 | hypothetical protein | | |
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T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.