SecReT4

T4SS
References

T4SS ID	585
Strain	Yersinia pestis biovar Orientalis str. IP275 plasmid pIP1202 (NC_009141)
Replicon	plasmid pIP1202 [Browse all T4SS(s) in this replicon]
Accession	NC_009141
Location	64226..92392; 171785..179796
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
Experimental investigation has been performed on this T4SS.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_009141
Region 1: 64226..92392

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	YpIP275_pIP1202_0088	59311..59928 [+], 618	134044776	hypothetical protein
2	YpIP275_pIP1202_0089	60140..60439 [+], 300	134044827	hypothetical protein
3	YpIP275_pIP1202_0090	60531..61019 [-], 489	134044803	hypothetical protein
4	YpIP275_pIP1202_0091 (topB)	61034..63226 [-], 2193	134044830	DNA topoisomerase III
5	YpIP275_pIP1202_0092	63441..64058 [-], 618	134044902	putative lipoprotein
6	YpIP275_pIP1202_0093 (traI)	64226..67204 [+], 2979	134044797	type IV conjugative transfer system protein TraI	TraI_F
7	YpIP275_pIP1202_0094 (traD)	67201..69066 [+], 1866	134044897	type IV conjugative transfer system protein TraD	TraD_F
8	YpIP275_pIP1202_0095	69077..69661 [+], 585	134044911	hypothetical protein
9	YpIP275_pIP1202_0096	69618..70247 [+], 630	134044808	putative type IV conjugative transfer system coupling factor
10	YpIP275_pIP1202_0097	70257..70703 [+], 447	134044947	hypothetical protein
11	YpIP275_pIP1202_0098	70713..71090 [+], 378	134044846	hypothetical protein
12	YpIP275_pIP1202_0099	71090..71752 [+], 663	134044931	hypothetical protein
13	YpIP275_pIP1202_0100	72088..72453 [+], 366	134044838	hypothetical protein
14	YpIP275_pIP1202_0101 (traL)	72598..72879 [+], 282	134044883	type IV conjugative transfer system protein TraL	TraL_F
15	YpIP275_pIP1202_0102 (traE)	72876..73502 [+], 627	134044802	type IV conjugative transfer system protein TraE	TraE_F
16	YpIP275_pIP1202_0103	73486..74403 [+], 918	134044828	hypothetical protein	TraK_F
17	YpIP275_pIP1202_0104 (traB)	74400..75716 [+], 1317	134044917	type IV conjugative transfer system protein TraB	TraB_F
18	YpIP275_pIP1202_0105 (traV)	75713..76291 [+], 579	134044796	type IV conjugative transfer system protein TraV	TraV_F
19	YpIP275_pIP1202_0106 (traA)	76304..76687 [+], 384	134044863	type IV conjugative transfer system protein TraA	TraA_F
20	YpIP275_pIP1202_0107	76888..82419 [+], 5532	134044789	hypothetical protein
21	YpIP275_pIP1202_0108	82568..83275 [+], 708	134044873	hypothetical protein
22	YpIP275_pIP1202_0109 (traC)	83272..85719 [+], 2448	134044850	type IV conjugative transfer system protein TraC	TraC_F
23	YpIP275_pIP1202_0110	85734..86051 [+], 318	134044762	hypothetical protein
24	YpIP275_pIP1202_0111	86048..86578 [+], 531	134044950	type IV conjugative transfer system signal peptidase
25	YpIP275_pIP1202_0112 (traW)	86541..87806 [+], 1266	134044768	type IV conjugative transfer system protein TraW	TraW_F
26	YpIP275_pIP1202_0113	87803..88474 [+], 672	134044898	cyclic diguanylate phosphodiesterase domain-containing protein
27	YpIP275_pIP1202_0114 (traU)	88471..89478 [+], 1008	134044901	type IV conjugative transfer system protein TraU	TraU_F
28	YpIP275_pIP1202_0115 (traN)	89594..92392 [+], 2799	134044766	conjugal transfer mating pair stabilization protein TraN	TraN_F
29	YpIP275_pIP1202_0116	92431..93291 [-], 861	134044847	putative lipoprotein
30	YpIP275_pIP1202_0117	93414..94055 [-], 642	134044771	hypothetical protein
31	YpIP275_pIP1202_0118	94349..94669 [+], 321	134044868	hypothetical protein
32	YpIP275_pIP1202_0119	94973..95158 [+], 186	134044761	hypothetical protein
33	YpIP275_pIP1202_0120	95378..96346 [+], 969	134044874	AAA family ATPase
34	YpIP275_pIP1202_0121	96357..97265 [+], 909	134044930	hypothetical protein

Region 2: 171785..179796

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	YpIP275_pIP1202_0206	166969..167460 [+], 492	134044752	hypothetical protein
2	YpIP275_pIP1202_0207	167787..168662 [+], 876	134044932	DNA replication terminus site-binding protein
3	YpIP275_pIP1202_0208	168824..169864 [+], 1041	134044867	hypothetical protein
4	YpIP275_pIP1202_0209	169864..170142 [+], 279	134044933	hypothetical protein
5	YpIP275_pIP1202_0210	170151..171662 [+], 1512	134044744	hypothetical protein
6	YpIP275_pIP1202_0211 (traF)	171785..172813 [+], 1029	134044800	type IV conjugative transfer system protein TraF	TraF_F
7	YpIP275_pIP1202_0212 (traH)	172815..174248 [+], 1434	134044926	type IV conjugative transfer system protein TraH	TraH_F
8	YpIP275_pIP1202_0213 (traG)	174261..177875 [+], 3615	134044751	type IV conjugative transfer system protein TraG	TraG_F
9	YpIP275_pIP1202_0214	177913..178275 [-], 363	134044820	hypothetical protein
10	YpIP275_pIP1202_0215	178991..179263 [+], 273	134044753	Ner-like DNA-binding protein
11	YpIP275_pIP1202_0216	179263..179796 [+], 534	134044806	transglycosylase SLT domain-containing protein	Orf169_F
12	YpIP275_pIP1202_0217	179807..180415 [+], 609	134044791	hypothetical protein
13	YpIP275_pIP1202_0218	180463..180963 [+], 501	134044833	hypothetical protein
14	YpIP275_pIP1202_0219	181023..181442 [-], 420	134044770	hypothetical protein
15	YpIP275_pIP1202_0220	181444..181737 [-], 294	134044903	hypothetical protein
16	YpIP275_pIP1202_0221	181754..182737 [-], 984	134044826	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Welch TJ; Fricke WF; McDermott PF; White DG; Rosso ML; Rasko DA; Mammel MK; Eppinger M; Rosovitz MJ; Wagner D; Rahalison L; Leclerc JE; Hinshaw JM; Lindler LE; Cebula TA; Carniel E; Ravel J (2007). Multiple antimicrobial resistance in plague: an emerging public health risk. PLoS One. 2(3):e309. [PudMed:17375195]