SecReT4

T4SS
References

T4SS ID	572
Strain	Enterobacter cloacae plasmid pEC-IMP (NC_012555)
Replicon	plasmid pEC-IMP [Browse all T4SS(s) in this replicon]
Accession	NC_012555
Location	1998..11636; 30622..39405; 199961..218499
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_012555
Region 1: 1998..11636

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pEC-IMP_001	1..876 [+], 876	226807568	RepHIA
2	pEC-IMP_002	1998..2378 [+], 381	226807569	TrhA	TraA_F
3	pEC-IMP_003	2396..2746 [+], 351	226807570	TrhL	TraL_F
4	pEC-IMP_004	2758..3546 [+], 789	226807571	TrhE	TraE_F
5	pEC-IMP_005	3543..4817 [+], 1275	226807572	TrhK	TraK_F
6	pEC-IMP_006	4819..5280 [+], 462	226807573	HtdO
7	pEC-IMP_007	5258..6625 [+], 1368	226807574	TrhB	TraB_F
8	pEC-IMP_008	6633..7115 [+], 483	226807575	HtdV
9	pEC-IMP_009	7129..7986 [+], 858	226807576	HtdT
10	pEC-IMP_010	7996..8946 [+], 951	226807577	TrhV	TraV_F
11	pEC-IMP_011	8955..11636 [+], 2682	226807578	TrhC	TraC_F

Region 2: 30622..39405

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pEC-IMP_024	30123..30635 [+], 513	226807591	TrhF
2	pEC-IMP_025	30622..32133 [+], 1512	226807592	TrhW	TraW_F
3	pEC-IMP_026	32173..33333 [+], 1161	226807593	TrhU	TraU_F
4	pEC-IMP_027	33352..36540 [+], 3189	226807594	conjugal transfer mating pair stabilization protein TraN	TraN_F
5	pEC-IMP_028	36569..37441 [-], 873	226807595	hypothetical protein
6	pEC-IMP_029	37621..39405 [+], 1785	226807596	TrhI	TraI_F
7	pEC-IMP_030	39800..40672 [+], 873	226807597	hypothetical protein
8	pEC-IMP_031	40730..41107 [+], 378	226807598	hypothetical protein
9	pEC-IMP_032	41168..42145 [+], 978	226807599	hypothetical protein
10	pEC-IMP_033	42203..43261 [+], 1059	226807600	hypothetical protein
11	pEC-IMP_034	43393..43566 [+], 174	226807601	hypothetical protein

Region 3: 199961..218499

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pEC-IMP_184	195299..196558 [+], 1260	226807750	MucB
2	pEC-IMP_185	196604..197413 [-], 810	226807751	hypothetical protein
3	pEC-IMP_186	197520..198131 [+], 612	226807752	hypothetical protein
4	pEC-IMP_187	198191..198613 [-], 423	226807753	hypothetical protein
5	pEC-IMP_188	198647..199045 [-], 399	226807754	hypothetical protein
6	pEC-IMP_189	199064..199813 [-], 750	226807755	DsbC
7	pEC-IMP_190	199961..200500 [+], 540	226807756	hypothetical protein	Orf169_F
8	pEC-IMP_191	200718..201140 [+], 423	226807757	hypothetical protein
9	pEC-IMP_192	201264..202325 [+], 1062	226807758	hypothetical protein
10	pEC-IMP_193	202335..202841 [+], 507	226807759	hypothetical protein
11	pEC-IMP_194	202964..206914 [-], 3951	226807760	TrhG	TraG_F
12	pEC-IMP_195	206923..208401 [-], 1479	226807761	TrhH	TraH_F
13	pEC-IMP_196	208328..209374 [-], 1047	226807762	TrhF	TraF_F
14	pEC-IMP_197	209966..210478 [-], 513	226807763	TrhY
15	pEC-IMP_198	210480..211280 [-], 801	226807764	TrhR
16	pEC-IMP_199	212040..212525 [+], 486	226807765	TraH
17	pEC-IMP_200	212522..213259 [+], 738	226807766	hypothetical protein
18	pEC-IMP_201	213263..216415 [+], 3153	226807767	TraI
19	pEC-IMP_202	216415..218499 [+], 2085	226807768	TraG	TraD_F
20	pEC-IMP_310	218499..219608 [+], 1110	226807769	hypothetical protein
21	pEC-IMP_204	219595..220257 [+], 663	226807770	TraJ
22	pEC-IMP_205	220268..221449 [+], 1182	226807771	hypothetical protein
23	pEC-IMP_206	221451..222182 [+], 732	226807772	hypothetical protein
24	pEC-IMP_207	222469..222822 [-], 354	226807773	hypothetical protein
25	pEC-IMP_208	222888..223172 [-], 285	226807774	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_012555