SecReT4

T4SS
References

T4SS ID	540
Strain	Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_002942
Location	2319208..2343410
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	2	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	0

The information of T4SS components from NC_002942

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	lpg2073	2314344..2315951 [-], 1608	52842287	hypothetical protein
2	lpg2074	2315954..2316583 [-], 630	52842288	4-diphosphocytidyl-2C-methyl-D-erythritol synthase
3	lpg2075 (dam)	2316456..2317292 [-], 837	52842289	DNA adenine methylase
4	lpg2076	2317885..2318976 [-], 1092	52842290	hypothetical protein
5	lpg2077	2319208..2325153 [-], 5946	52842291	hypothetical protein	TraI_F
6	lpg2078	2325174..2327066 [-], 1893	52842292	hypothetical protein	TraD_F
7	lpg2079 (traG)	2327599..2330328 [-], 2730	52842293	hypothetical protein	TraG_F
8	lpg2080 (traH)	2330325..2331710 [-], 1386	52842294	hypothetical protein	TraH_F
9	lpg2081 (traF)	2331707..2332129 [-], 423	52842295	sex pilus assembly TraF, thiol-disulfide isomerase and thioredoxins	TraF_F
10	lpg2082 (traF)	2332119..2332901 [-], 783	52842296	pilus assembly protein TraF	TraF_F
11	lpg2083 (traN)	2332894..2334705 [-], 1812	52842297	conjugal transfer protein TraN	TraN_F
12	lpg2084	2334705..2335376 [-], 672	52842298	conjugative transfer protein TrbC	TrbC_F
13	lpg2085 (traU)	2335389..2336384 [-], 996	52842299	hypothetical protein	TraU_F
14	lpg2086	2336381..2336989 [-], 609	52842300	hypothetical protein	TraW_F
15	lpg2087 (traC)	2337314..2339911 [-], 2598	52842301	hypothetical protein	TraC_F
16	lpg2088 (traV)	2339878..2340228 [-], 351	52842302	conjugative transfer: assembly	TraV_F
17	lpg2089	2340242..2341561 [-], 1320	52842303	conjugative transfer protein TraB	TraB_F
18	lpg2090	2341530..2342243 [-], 714	52842304	conjugative transfer protein TraK	TraK_F
19	lpg2091	2342246..2342809 [-], 564	52842305	conjugative transfer protein TraE	TraE_F
20	lpg2092	2342813..2343106 [-], 294	52842306	sex pilus assembly protein-like	TraL_F
21	lpg2093	2343108..2343410 [-], 303	52842307	fimbrial protein -like	TraA_F
22	lpg2094 (csrA)	2343425..2343661 [-], 237	52842308	carbon storage regulator RsmA
23	lpg2095 (lvrA)	2344000..2344884 [-], 885	52842309	protein LvrA
24	lpg2096	2345033..2345737 [+], 705	52842310	prophage repressor CI-like
25	lpg2097	2345877..2346560 [+], 684	52842311	hypothetical protein
26	lpg2098	2347009..2347581 [+], 573	52842312	MsrA3 - peptide methionine sulfoxide reductase
27	lpg2099	2347541..2348062 [+], 522	52842313	methionine sulfoxide reductase B

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Brassinga AK; Hiltz MF; Sisson GR; Morash MG; Hill N; Garduno E; Edelstein PH; Garduno RA; Hoffman PS (2003). A 65-kilobase pathogenicity island is unique to Philadelphia-1 strains of Legionella pneumophila. J Bacteriol. 185(15):4630-7. [PudMed:12867476]

This literature contains bioinformatics investigation