SecReT4

T4SS
References

T4SS ID	573
Strain	Klebsiella pneumoniae plasmid pK29 (NC_010870)
Replicon	plasmid pK29 [Browse all T4SS(s) in this replicon]
Accession	NC_010870
Location	855..10466; 29452..38235; 156213..174751
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_010870
Region 1: 855..10466

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pK29_p001	84..332 [+], 249	190410171	hypothetical protein
2	pK29_p002	855..1208 [+], 354	190410170	trha	TraA_F
3	pK29_p003	1316..1576 [+], 261	190410172	trhL	TraL_F
4	pK29_p004	1588..2376 [+], 789	190410173	trhE	TraE_F
5	pK29_p005	2376..3647 [+], 1272	190410174	trhK	TraK_F
6	pK29_p006	3649..4110 [+], 462	190410175	htdO
7	pK29_p007	4100..5455 [+], 1356	190410176	trhB	TraB_F
8	pK29_p008	6826..7776 [+], 951	190410177	trhV	TraV_F
9	pK29_p009	7785..10466 [+], 2682	190410178	trhC	TraC_F
10	pK29_p010	11563..11718 [+], 156	190410179	hypothetical protein
11	pK29_p011	12541..12666 [+], 126	190410180	hypothetical protein
12	pK29_p012	13015..13176 [+], 162	190410181	hypothetical protein

Region 2: 29452..38235

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pK29_p027	28953..29465 [+], 513	190410196	trhF
2	pK29_p028	29452..30963 [+], 1512	190410197	trhW	TraW_F
3	pK29_p029	31102..32163 [+], 1062	190410198	trhU	TraU_F
4	pK29_p030	32182..35370 [+], 3189	190410199	conjugal transfer mating pair stabilization protein TraN	TraN_F
5	pK29_p031	35399..36271 [-], 873	190410200	lipoprotein
6	pK29_p032	36451..38235 [+], 1785	190410201	trhI	TraI_F
7	pK29_p033	38318..38473 [+], 156	190410202	hypothetical protein
8	pK29_p034	38630..39502 [+], 873	190410203	hypothetical protein
9	pK29_p035	39560..39937 [+], 378	190410204	hypothetical protein
10	pK29_p036	39998..40975 [+], 978	190410205	hypothetical protein
11	pK29_p037	41033..42091 [+], 1059	190410206	putative ATP-binding protein
12	pK29_p038	42223..42396 [+], 174	190410207	hypothetical protein

Region 3: 156213..174751

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pK29_p173	151557..152810 [+], 1254	190410340	mucB
2	pK29_p174	152856..153665 [-], 810	190410341	hypothetical protein
3	pK29_p175	153772..154383 [+], 612	190410342	putative lipoprotein
4	pK29_p176	154443..154865 [-], 423	190410343	hypothetical protein
5	pK29_p177	154899..155291 [-], 393	190410344	hypothetical protein
6	pK29_p178	155316..156065 [-], 750	190410345	dsbC
7	pK29_p179	156213..156752 [+], 540	190410346	putative pilin biogenesis protein	Orf169_F
8	pK29_p180	156835..157392 [+], 558	190410347	hypothetical protein
9	pK29_p181	157516..158577 [+], 1062	190410348	hypothetical protein
10	pK29_p182	158587..159093 [+], 507	190410349	hypothetical protein
11	pK29_p183	159216..163166 [-], 3951	190410350	trhG	TraG_F
12	pK29_p184	163175..164590 [-], 1416	190410351	trhH	TraH_F
13	pK29_p185	164580..165626 [-], 1047	190410352	trhF	TraF_F
14	pK29_p186	166218..166730 [-], 513	190410353	trhY
15	pK29_p187	166732..167532 [-], 801	190410354	trhR
16	pK29_p188	168080..168241 [+], 162	190410355	hypothetical protein
17	pK29_p189	168292..168777 [+], 486	190410356	traH
18	pK29_p190	168774..169511 [+], 738	190410357	hypothetical protein
19	pK29_p191	169515..172667 [+], 3153	190410358	traI
20	pK29_p192	172667..174751 [+], 2085	190410359	traG	TraD_F
21	pK29_p193	174748..175860 [+], 1113	190410360	hypothetical protein
22	pK29_p194	175847..176509 [+], 663	190410361	traJ
23	pK29_p195	176520..177701 [+], 1182	190410362	putative peptidase
24	pK29_p196	177703..178434 [+], 732	190410363	putative periplasmic protein
25	pK29_p197	178721..179074 [-], 354	190410364	hypothetical protein
26	pK29_p198	179140..179424 [-], 285	190410365	putative inner membrane protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Chen YT; Lauderdale TL; Liao TL; Shiau YR; Shu HY; Wu KM; Yan JJ; Su IJ; Tsai SF (2007). Sequencing and comparative genomic analysis of pK29, a 269-kilobase conjugative plasmid encoding CMY-8 and CTX-M-3 beta-lactamases in Klebsiella pneumoniae. Antimicrob Agents Chemother. 51(8):3004-7. [PudMed:17526756]