SecReT4

T4SS
References

T4SS ID	99
Strain	Escherichia coli plasmid NR1 (NC_009133)
Replicon	plasmid NR1 [Browse all T4SS(s) in this replicon]
Accession	NC_009133
Location	49964..84510
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	1	1	1	1	1	1	1
Component	TraY_F	TrbC_F	Orf169_F
Number	1	1	1

The information of T4SS components from NC_009133

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	D616_p81058	45293..45868 [+], 576	133756498	hypothetical protein
2	D616_p81059 (psiB)	45937..46347 [+], 411	133756499	truncated plasmid SOS inhibition protein B
3	D616_p81060	46367..47086 [+], 720	133756500	plasmid SOS inhibition protein A
4	D616_p81061	47083..47223 [+], 141	133756501	hypothetical protein
5	D616_p81062	47308..47520 [+], 213	133756502	modulator of post-segregation killing protein
6	D616_p81064	47366..47524 [+], 159	133756503	post-segregation killing protein
7	D616_p81063	47762..48139 [-], 378	133756504	hypothetical protein
8	D616_p81065	48439..48735 [+], 297	133756505	hypothetical protein
9	D616_p81066	48846..49667 [+], 822	133756506	hypothetical protein
10	D616_p81067	49804..49938 [+], 135	133756507	putative ORF
11	D616_p81069	49964..50473 [-], 510	133756508	lytic transglycosylase	Orf169_F
12	D616_p81068	50889..51272 [+], 384	133756509	conjugal transfer protein M	TraM_F
13	D616_p81070	51466..52137 [+], 672	133756510	positive regulator of conjugal transfer operon
14	D616_p81071	52274..52501 [+], 228	133756511	conjugal transfer protein Y	TraY_F
15	D616_p81072	52534..52893 [+], 360	133756512	prepropilin	TraA_F
16	D616_p81073	52908..53219 [+], 312	133756513	conjugal transfer protein L	TraL_F
17	D616_p81075	53241..53807 [+], 567	133756514	conjugal transfer protein E	TraE_F
18	D616_p81074	53794..54522 [+], 729	133756515	conjugal transfer protein K	TraK_F
19	D616_p81076	54522..55973 [+], 1452	133756516	conjugal transfer protein B	TraB_F
20	D616_p81078	55942..56529 [+], 588	133756517	conjugal transfer protein P
21	D616_p81077	56468..56836 [+], 369	133756518	conjugal transfer protein
22	D616_p81079	56833..57348 [+], 516	133756519	conjugal transfer protein	TraV_F
23	D616_p81080	57483..57704 [+], 222	133756520	conjugal transfer protein
24	D616_p81081	57697..58110 [+], 414	133756521	hypothetical protein
25	D616_p81082	58103..58576 [+], 474	133756522	hypothetical protein
26	D616_p81083	58656..58874 [+], 219	133756523	hypothetical protein
27	D616_p81084	58902..59249 [+], 348	133756524	hypothetical protein
28	D616_p81085	59375..62005 [+], 2631	133756525	conjugal transfer protein C	TraC_F
29	D616_p81086	62002..62388 [+], 387	133756526	conjugal transfer protein
30	D616_p81087	62385..63017 [+], 633	133756527	conjugal transfer protein	TraW_F
31	D616_p81088	63014..64006 [+], 993	133756528	conjugal transfer protein	TraU_F
32	D616_p81089	64030..64341 [+], 312	133756529	hypothetical protein
33	D616_p81090	64350..64988 [+], 639	133756530	conjugal transfer protein	TrbC_F
34	D616_p81091	64985..66835 [+], 1851	133756531	conjugal transfer protein	TraN_F
35	D616_p81092	66859..67119 [+], 261	133756532	conjugal transfer protein
36	D616_p81093	67094..67855 [+], 762	133756533	conjugal transfer protein	TraF_F
37	D616_p81094	67869..68213 [+], 345	133756534	conjugal transfer protein
38	D616_p81095	68332..68616 [+], 285	133756535	pilin chaperone protein	TraQ_F
39	D616_p81096	68603..69148 [+], 546	133756536	conjugal transfer protein
40	D616_p81097	69078..69425 [+], 348	133756537	conjugal transfer protein
41	D616_p81098	69373..69798 [+], 426	133756538	conjugal transfer protein
42	D616_p81099	69776..71158 [+], 1383	133756539	conjugal transfer protein	TraH_F
43	D616_p81100	71155..73977 [+], 2823	133756540	mating pair stabilization protein	TraG_F
44	D616_p81101	73993..74478 [+], 486	133756541	entry exclusion protein
45	D616_p81102	74527..75258 [+], 732	133756542	surface exclusion lipoprotein
46	D616_p81104	75416..76198 [+], 783	133756543	hypothetical protein
47	D616_p81103	76249..78474 [+], 2226	133756544	coupling protein	TraD_F
48	D616_p81106	78474..83744 [+], 5271	133756545	conjugal transfer nickase/helicase	TraI_F
49	D616_p81105	83764..84510 [+], 747	133756546	pilin acetylase	TraX_F
50	D616_p81107	84569..85429 [+], 861	133756547	hypothetical protein
51	D616_p81108	85532..86092 [+], 561	133756548	RNA-binding protein
52	D616_p81109	86221..86433 [+], 213	133756549	hypothetical protein
53	D616_p81110	86677..87138 [+], 462	133756550	hypothetical protein
54	D616_p81111	87184..87393 [+], 210	133756551	modulating protein
55	D616_p81112	87431..88021 [+], 591	133756552	hypothetical protein
56	D616_p81113	88261..88515 [+], 255	133756553	negative regulator of repA1 expression
57	D616_p81115	88753..88827 [+], 75	133756554	leader peptide of repA1

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009133