SecReT4
T4SS ID90
StrainEscherichia coli O127:H6 str. E2348/69
Repliconplasmid pMAR2 [Browse all T4SS(s) in this replicon]
AccessionNC_011603
Location36134..69183
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_011603
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1E2348_P1_036 (copB)32279..32527 [-], 249215276216replication protein 
2E2348_P1_037 (srnB)32811..32960 [-], 150215276217post-segregational killing toxin 
3E2348_P1_03833149..34522 [+], 1374215276218transposase of ISEc13 
4E2348_P1_039 (finO)34555..35112 [-], 558215276219conjugal transfer fertility inhibition protein FinO 
5E2348_P1_04035215..36075 [-], 861215276220hypothetical protein 
6E2348_P1_041 (traX)36134..36880 [-], 747215276221conjugal transfer pilus acetylation protein TraX  TraX_F
7E2348_P1_042 (traI)36900..42170 [-], 5271215276222conjugal transfer nickase/helicase TraI  TraI_F
8E2348_P1_043 (mvpT)42252..42479 [+], 228215276223post-segregational killing toxin 
9E2348_P1_044 (mvpA)42479..42877 [+], 399215276224plasmid maintenance protein 
10E2348_P1_045 (traD)42886..45039 [-], 2154215276225conjugal transfer protein TraD  TraD_F
11E2348_P1_046 (traT)45292..46023 [-], 732215276226conjugal transfer surface exclusion protein TraT 
12E2348_P1_047 (traS)46037..46546 [-], 510215276227conjugal transfer entry exclusion protein TraS 
13E2348_P1_048 (traG)46543..49368 [-], 2826215276228conjugal transfer mating pair stabilization protein TraG  TraG_F
14E2348_P1_049 (traH)49365..50738 [-], 1374215276229conjugal transfer pilus assembly protein TraH  TraH_F
15E2348_P1_050 (trbF)50738..51118 [-], 381215276230conjugal transfer protein TrbF 
16E2348_P1_051 (trbJ)51105..51446 [-], 342215276231conjugal transfer protein TrbJ 
17E2348_P1_052 (trbB)51376..51921 [-], 546215276232conjugal transfer protein TrbB 
18E2348_P1_053 (traQ)51908..52192 [-], 285215276233conjugal transfer pilin chaperone TraQ  TraQ_F
19E2348_P1_054 (artA)52273..52587 [+], 315215276234hypothetical protein 
20E2348_P1_055 (trbA)52589..52921 [-], 333215276235conjugal transfer protein TrbA 
21E2348_P1_056 (traF)52952..53713 [-], 762215276236conjugal pilus assembly protein TraF  TraF_F
22E2348_P1_057 (trbE)53688..53948 [-], 261215276237conjugal transfer protein TrbE 
23E2348_P1_058 (traN)53973..55781 [-], 1809215276238conjugal transfer mating pair stabilization protein TraN  TraN_F
24E2348_P1_059 (trbC)55778..56416 [-], 639215276239conjugal transfer pilus assembly protein TrbC  TrbC_F
25E2348_P1_060 (traU)56425..57417 [-], 993215276240conjugal transfer pilus assembly protein TraU  TraU_F
26E2348_P1_061 (traW)57414..58046 [-], 633215276241conjugal transfer pilus assembly protein TraW  TraW_F
27E2348_P1_062 (trbI)58043..58429 [-], 387215276242conjugal transfer protein TrbI 
28E2348_P1_063 (traC)58426..61053 [-], 2628215276243conjugal transfer ATP-binding protein TraC  TraC_F
29E2348_P1_064 (traR)61213..61434 [-], 222215276244conjugal transfer protein TraR 
30E2348_P1_065 (traV)61569..62084 [-], 516215276245conjugal transfer protein TraV  TraV_F
31E2348_P1_066 (trbG)62081..62332 [-], 252215276246conjugal transfer protein TrbG 
32E2348_P1_067 (trbD)62325..62645 [-], 321215276247conjugal transfer protein TrbD 
33E2348_P1_068 (traP)62632..63222 [-], 591215276248conjugal transfer protein TraP 
34E2348_P1_069 (traB)63212..64639 [-], 1428215276249conjugal transfer pilus assembly protein TraB  TraB_F
35E2348_P1_070 (traK)64639..65367 [-], 729215276250conjugal transfer protein TraK  TraK_F
36E2348_P1_071 (traE)65354..65920 [-], 567215276251conjugal transfer pilus assembly protein TraE  TraE_F
37E2348_P1_072 (traL)65942..66253 [-], 312215276252conjugal transfer pilus assembly protein TraL  TraL_F
38E2348_P1_073 (traA)66268..66633 [-], 366215276253conjugal transfer pilin subunit TraA  TraA_F
39E2348_P1_074 (traY)66667..66894 [-], 228215276254conjugal transfer protein TraY  TraY_F
40E2348_P1_075 (traJ)66989..67675 [-], 687215276255transcriptional activator 
41E2348_P1_076 (traM)67865..68248 [-], 384215276256conjugal transfer protein TraM  TraM_F
42E2348_P1_07768674..69183 [+], 510215276257lytic transglycosylase  Orf169_F
43E2348_P1_07869479..70300 [-], 822215276258hypothetical protein 
44E2348_P1_08171571..72944 [-], 1374215276259transposase of ISEc13 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_011603

Genomics & Bioinformatics Group in MML, SJTU