SecReT4

T4SS
References

T4SS ID	808
Strain	Sphingobium japonicum UT26S
Replicon	plasmid pCHQ1 [Browse all T4SS(s) in this replicon]
Accession	NC_014007
Location	79698..100474
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	0	1	1	1	1	0
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	0

The information of T4SS components from NC_014007

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SJA_P1-00950	75012..75665 [-], 654	294023751	hypothetical protein
2	SJA_P1-00960	75728..75868 [-], 141	294023752	hypothetical protein
3	SJA_P1-00970	76044..76661 [-], 618	294023753	GntR family transcriptional regulator
4	SJA_P1-00980	76671..77087 [-], 417	294023754	XRE family transcriptional regulator
5	SJA_P1-00990	77248..77670 [-], 423	294023755	hypothetical protein
6	SJA_P1-01000	78012..78287 [+], 276	294023756	hypothetical protein
7	SJA_P1-01010	78284..79072 [+], 789	294023757	putative protein-disulfide isomerase
8	SJA_P1-01020	79267..79581 [+], 315	294023758	hypothetical protein
9	SJA_P1-01030	79698..79964 [+], 267	294023759	hypothetical protein	TraL_F
10	SJA_P1-01040	79973..80608 [+], 636	294023760	putative sex pilus assembly and synthesis protein	TraE_F
11	SJA_P1-01050	80595..81383 [+], 789	294023761	hypothetical protein	TraK_F
12	SJA_P1-01060 (traB)	81380..82708 [+], 1329	294023762	conjugal transfer protein TraB	TraB_F
13	SJA_P1-01070	82708..83343 [+], 636	294023763	hypothetical protein	TraV_F
14	SJA_P1-01080 (traC)	83340..85859 [+], 2520	294023764	type IV secretory pathway VirB4 component	TraC_F
15	SJA_P1-01090	85865..86191 [+], 327	294023765	hypothetical protein
16	SJA_P1-01100	86188..86430 [+], 243	294023766	hypothetical protein
17	SJA_P1-01110 (traW)	86420..87079 [+], 660	294023767	plasmid transfer protein TraW	TraW_F
18	SJA_P1-01120 (traU)	87076..88089 [+], 1014	294023768	conjugal DNA transfer protein TraU	TraU_F
19	SJA_P1-01130	88188..88430 [+], 243	294023769	hypothetical protein
20	SJA_P1-01140	88427..90349 [+], 1923	294023770	hypothetical protein
21	SJA_P1-01150 (traN)	90346..91443 [+], 1098	294023771	mating pair stabilization protein TraN	TraN_F
22	SJA_P1-01160	91499..92299 [+], 801	294023772	hypothetical protein
23	SJA_P1-01170	92271..92867 [+], 597	294023773	type IV secretory pathway protease TraF-like protein
24	SJA_P1-01180	92864..93763 [+], 900	294023774	thioredoxin-related protein	TraF_F
25	SJA_P1-01190	93802..94200 [-], 399	294023775	PilT-like protein
26	SJA_P1-01200	94197..94445 [-], 249	294023776	putative transcriptional regulator AbrB
27	SJA_P1-01210	94668..95267 [+], 600	294023777	hypothetical protein
28	SJA_P1-01220 (traH)	95362..96741 [+], 1380	294023778	sex pilus assembly protein TraH	TraH_F
29	SJA_P1-01230 (traG)	96746..100474 [+], 3729	294023779	DNA transfer and F pilus assembly protein TraG	TraG_F
30	SJA_P1-01240	100471..100938 [-], 468	294023780	hypothetical protein
31	SJA_P1-01250	101219..101524 [+], 306	294023781	hypothetical protein
32	SJA_P1-01260	101527..102138 [+], 612	294023782	MobA-related protein
33	SJA_P1-01270	102180..102389 [-], 210	294023783	hypothetical protein
34	SJA_P1-01280	102413..102685 [-], 273	294023784	hypothetical protein
35	SJA_P1-01290	102729..103079 [+], 351	294023785	GST-like protein
36	SJA_P1-01300	103133..103531 [-], 399	294023786	HPP-family protein
37	SJA_P1-01310	103686..105029 [-], 1344	294023787	putative glutathione reductase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_014007