SecReT4

T4SS
References

T4SS ID	133
Strain	Escherichia coli plasmid pEC_B24 (NC_014382)
Replicon	plasmid pEC_B24 [Browse all T4SS(s) in this replicon]
Accession	NC_014382
Location	6567..22947
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	0	0	1	0	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	0	0	1	1	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	0

The information of T4SS components from NC_014382

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pecB24_p02 (traT)	2494..3249 [-], 756	302595285	conjugal transfer surface exclusion protein
2	pecB24_p03 (traS)	3239..3763 [-], 525	302595286	surface exclusion protein
3	pecB24_p05 (traH)	6567..7943 [-], 1377	302595287	conjugal transfer protein	TraH_F
4	pecB24_p06 (trbJ)	7940..8383 [-], 444	302595288	conjugal transfer protein
5	pecB24_p07 (trbB)	8232..8777 [-], 546	302595289	conjugal transfer protein
6	pecB24_p08 (traQ)	8764..9048 [-], 285	302595290	conjugal transfer protein	TraQ_F
7	pecB24_p09 (trbA)	9167..9514 [-], 348	302595291	type IV secretion-like conjugative transfer system
8	pecB24_p10 (traF)	9530..10321 [-], 792	302595292	F pilus assembly	TraF_F
9	pecB24_p11 (trbE)	10266..10526 [-], 261	302595293	conjugal transfer protein
10	pecB24_p12 (traN)	10550..12358 [-], 1809	302595294	type IV secretion-like conjugative transfer system mating pair stabilization protein	TraN_F
11	pecB24_p13 (trbC)	12355..13020 [-], 666	302595295	conjugal transfer protein	TrbC_F
12	pecB24_p15 (traU)	13990..15084 [-], 1095	302595296	F pilus assembly	TraU_F
13	pecB24_p16 (traW)	14979..15725 [-], 747	302595297	F pilus assembly	TraW_F
14	pecB24_p17 (trbI)	15608..16009 [-], 402	302595298	conjugal transfer protein
15	pecB24_p18 (traC)	15991..18624 [-], 2634	302595299	F pilus assembly	TraC_F
16	pecB24_p19 (traR)	18778..18999 [-], 222	302595300	F pilus assembly
17	pecB24_p20 (traV)	19134..19649 [-], 516	302595301	F pilus assembly	TraV_F
18	pecB24_p21 (trbG)	19646..19912 [-], 267	302595302	conjugal transfer protein
19	pecB24_p22 (trbD)	19890..20300 [-], 411	302595303	conjugal transfer protein
20	pecB24_p23 (traP)	20197..20823 [-], 627	302595304	conjugal transfer protein
21	pecB24_p24 (traB)	20771..22201 [-], 1431	302595305	F pilus assembly	TraB_F
22	pecB24_p25 (traK)	22198..22947 [-], 750	302595306	F pilus assembly	TraK_F
23	pecB24_p27 (yubO)	23103..23486 [+], 384	302595307	hypothetical protein
24	pecB24_p28 (o2r_53)	23466..23711 [-], 246	302595308	hypothetical protein
25	pecB24_p29	23785..24009 [+], 225	302595309	hypothetical protein
26	pecB24_p30 (hok)	24363..24608 [-], 246	302595311	post-segregational killing protein
27	pecB24_p31 (mok)	24367..24585 [-], 219	302595310	modulator of Hok protein
28	pecB24_p32 (psiA)	24801..25520 [-], 720	302595312	plasmid SOS inhibition protein A
29	pecB24_p33 (psiB)	25517..26023 [-], 507	302595313	plasmid SOS inhibition protein B

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Smet A; Van Nieuwerburgh F; Vandekerckhove TT; Martel A; Deforce D; Butaye P; Haesebrouck F (2010). Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences. PLoS One. 5(6):e11202. [PudMed:20585456]