SecReT4

T4SS
References

T4SS ID	512
Strain	Shewanella baltica OS185
Replicon	plasmid pS18501 [Browse all T4SS(s) in this replicon]
Accession	NC_009661
Location	41601..68320
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	0

The information of T4SS components from NC_009661

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Shew185_4422	36848..37249 [+], 402	152998519	hypothetical protein
2	Shew185_4423	37619..37912 [+], 294	152998520	hypothetical protein
3	Shew185_4424	37893..38402 [+], 510	152998521	hypothetical protein
4	Shew185_4425	38515..38742 [+], 228	152998522	HicB-related protein
5	Shew185_4426	39317..40315 [+], 999	152998523	hypothetical protein
6	Shew185_4427	40364..40663 [+], 300	152998524	hypothetical protein
7	Shew185_4428	41221..41580 [+], 360	152998525	hypothetical protein
8	Shew185_4429	41601..47561 [-], 5961	152998526	conjugative transfer relaxase protein TraI	TraI_F
9	Shew185_4430	47813..49939 [-], 2127	152998527	Type IV conjugative transfer system coupling protein TraD	TraD_F
10	Shew185_4431	49942..50475 [-], 534	152998528	hypothetical protein
11	Shew185_4432	50513..53323 [-], 2811	152998529	TraG domain-containing protein	TraG_F
12	Shew185_4433	53326..54714 [-], 1389	152998530	TraH family protein	TraH_F
13	Shew185_4434	54897..55340 [-], 444	152998531	Type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
14	Shew185_4435	55337..56074 [-], 738	152998532	hypothetical protein
15	Shew185_4436	56110..56985 [-], 876	152998533	Type-F conjugative transfer system pilin assembly protein TraF	TraF_F
16	Shew185_4437	56982..58796 [-], 1815	152998534	conjugal transfer mating pair stabilization protein TraN	TraN_F
17	Shew185_4438	58793..59530 [-], 738	152998535	Type-F conjugative transfer system pilin assembly protein TrbC	TrbC_F
18	Shew185_4439	59553..60566 [-], 1014	152998536	TraU family protein	TraU_F
19	Shew185_4440	60553..61257 [-], 705	152998537	Type-F conjugative transfer system protein TraW	TraW_F
20	Shew185_4441	61254..61625 [-], 372	152998538	pilus assembly protein
21	Shew185_4442	61627..64215 [-], 2589	152998539	Type-IV secretion system protein TraC	TraC_F
22	Shew185_4443	64219..64662 [-], 444	152998540	Type IV conjugative transfer system protein TraV	TraV_F
23	Shew185_4444	64695..66221 [-], 1527	152998541	TraB pilus assembly family protein	TraB_F
24	Shew185_4445	66218..67036 [-], 819	152998542	Type-F conjugative transfer system secretin TraK	TraK_F
25	Shew185_4446	67036..67602 [-], 567	152998543	TraE family protein	TraE_F
26	Shew185_4447	67643..67945 [-], 303	152998544	Type IV conjugative transfer system protein TraL	TraL_F
27	Shew185_4448	67949..68320 [-], 372	152998545	hypothetical protein	TraA_F
28	Shew185_4449	69924..70655 [+], 732	152998546	hypothetical protein
29	Shew185_4450	71317..71547 [-], 231	152998547	hypothetical protein
30	Shew185_4451	71713..72912 [+], 1200	152998548	cobyrinic acid ac-diamide synthase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009661