SecReT4

T4SS
References

T4SS ID	601
Strain	Geobacter lovleyi SZ
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_010814
Location	227290..233660; 283987..297466
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	0	1	0
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	0	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_010814
Region 1: 227290..233660

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Glov_0245	224203..224463 [+], 261	189423317	hypothetical protein
2	Glov_0246	224561..226081 [-], 1521	189423318	ABC transporter
3	Glov_0247	226478..227179 [-], 702	189423319	LexA DNA-binding domain-containing protein
4	Glov_0248	227290..227796 [+], 507	189423320	lytic transglycosylase	Orf169_F
5	Glov_0249	227783..228493 [+], 711	189423321	hypothetical protein
6	Glov_0250	228468..229841 [+], 1374	189423322	TraG family protein	TraD_F
7	Glov_0251	229838..231304 [+], 1467	189423323	metal-dependent phosphohydrolase HD sub domain-containing protein
8	Glov_0252	231301..232137 [+], 837	189423324	glutaredoxin	TraF_F
9	Glov_0253	232134..233660 [+], 1527	189423325	hypothetical protein	TraH_F
10	Glov_0254	233682..234083 [+], 402	189423326	hypothetical protein
11	Glov_0255	234602..235021 [+], 420	189423327	single-strand binding protein
12	Glov_0256	235131..236087 [+], 957	189423328	hypothetical protein
13	Glov_0257	236212..236376 [+], 165	189423329	hypothetical protein
14	Glov_0258	236389..237363 [+], 975	189423330	hypothetical protein
15	Glov_0259	237448..237648 [+], 201	189423331	hypothetical protein
16	Glov_0260	237645..237914 [+], 270	189423332	hypothetical protein
17	Glov_0261	238014..238427 [+], 414	189423333	hypothetical protein

Region 2: 283987..297466

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Glov_0306	281126..281866 [-], 741	189423377	hypothetical protein
2	Glov_0307	281875..282126 [-], 252	189423378	hypothetical protein
3	Glov_0308	282137..282631 [-], 495	189423379	type IV secretory protease
4	Glov_0309	282609..283001 [-], 393	189423380	hypothetical protein
5	Glov_0310	283025..283987 [-], 963	189423381	type-F conjugative transfer system pilin assembly protein TrbC
6	Glov_0311	283987..285009 [-], 1023	189423382	TraU family protein	TraU_F
7	Glov_0312	284993..285463 [-], 471	189423383	hypothetical protein
8	Glov_0313	285460..286116 [-], 657	189423384	hypothetical protein	TraW_F
9	Glov_0314	286113..289487 [-], 3375	189423385	hypothetical protein	TraN_F
10	Glov_0315	289493..291496 [-], 2004	189423386	hypothetical protein
11	Glov_0316	291453..293900 [-], 2448	189423387	sex pilus assembly protein	TraC_F
12	Glov_0317	293903..294397 [-], 495	189423388	hypothetical protein	TraV_F
13	Glov_0318	294394..295662 [-], 1269	189423389	TraB pilus assembly family protein	TraB_F
14	Glov_0319	295652..296599 [-], 948	189423390	hypothetical protein
15	Glov_0320	296599..297177 [-], 579	189423391	pilus assembly protein	TraE_F
16	Glov_0321	297200..297466 [-], 267	189423392	hypothetical protein	TraL_F
17	Glov_0322	297526..297825 [-], 300	189423393	hypothetical protein
18	Glov_0323	297880..298632 [-], 753	189423394	protein-disulfide isomerase
19	Glov_0324	298629..299234 [-], 606	189423395	OmpA/MotB domain-containing protein
20	Glov_0325	299514..300806 [-], 1293	189423396	HipA domain-containing protein
21	Glov_0326	300796..301134 [-], 339	189423397	XRE family transcriptional regulator
22	Glov_0327	301277..301594 [-], 318	189423398	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Wagner DD; Hug LA; Hatt JK; Spitzmiller MR; Padilla-Crespo E; Ritalahti KM; Edwards EA; Konstantinidis KT; Loffler FE (2012). Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae. BMC Genomics. 13(1):200. [PudMed:22616984]