SecReT4

T4SS
References

T4SS ID	594
Strain	Methylibium petroleiphilum PM1
Replicon	plasmid RPME01 [Browse all T4SS(s) in this replicon]
Accession	NC_008826
Location	300274..335666
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	0
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_008826

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Mpe_B0344	297668..297952 [+], 285	124262884	hypothetical protein
2	Mpe_B0345	298247..299167 [-], 921	124262885	zinc metalloproteinase Mpr protein
3	Mpe_B0346	299221..300066 [+], 846	124262886	disulfide isomerase
4	Mpe_B0347	300045..300302 [+], 258	124262887	hypothetical protein
5	Mpe_B0348 (traW)	300274..300966 [+], 693	124262888	sex pilus assembly protein	TraW_F
6	Mpe_B0349 (traU)	300963..302024 [+], 1062	124262889	conjugal DNA transfer protein	TraU_F
7	Mpe_B0350 (trbC)	302077..302763 [+], 687	124262890	sex pilus assembly and mating pair formation protein
8	Mpe_B0351 (ssb)	302967..303476 [-], 510	124262891	single-stranded DNA-binding protein
9	Mpe_B0352	303701..304126 [+], 426	124262892	hypothetical protein
10	Mpe_B0353	304366..304725 [+], 360	124262893	hypothetical protein
11	Mpe_B0354	304728..304961 [-], 234	124262894	hypothetical protein
12	Mpe_B0355	305033..305611 [-], 579	124262895	hypothetical protein
13	Mpe_B0356	305604..306383 [-], 780	124262896	hypothetical protein
14	Mpe_B0357 (dnaB)	306380..307777 [-], 1398	124262897	replicative DNA helicase
15	Mpe_B0358 (dnaG)	308885..310153 [+], 1269	124262898	DNA primase
16	Mpe_B0359	310447..310896 [-], 450	124262899	hypothetical protein
17	Mpe_B0360	310896..311447 [-], 552	124262900	hypothetical protein
18	Mpe_B0361 (traG)	311837..313606 [-], 1770	124262901	sex pilus assembly and mating pair formation	TraD_F
19	Mpe_B0362	313677..314489 [-], 813	124262902	hypothetical protein
20	Mpe_B0363 (omp)	314674..315327 [+], 654	124262903	outer membrane protein
21	Mpe_B0364	315324..315608 [+], 285	124262904	pilus assembly protein	TraL_F
22	Mpe_B0365 (traE)	315663..316304 [+], 642	124262905	sex pilus assembly protein	TraE_F
23	Mpe_B0366 (traK)	316301..317218 [+], 918	124262906	sex pilus assembly protein	TraK_F
24	Mpe_B0367 (traB)	317220..318428 [+], 1209	124262907	sex pilus assembly protein	TraB_F
25	Mpe_B0368	318442..318927 [+], 486	124262908	hypothetical protein
26	Mpe_B0369 (traV)	318917..319609 [+], 693	124262909	sex pilus assembly protein	TraV_F
27	Mpe_B0370	319626..319937 [+], 312	124262910	hypothetical protein	TraA_F
28	Mpe_B0371 (traC)	320102..322531 [+], 2430	124262911	F-pilin subunit assembly into extended F pili	TraC_F
29	Mpe_B0372	322685..323083 [+], 399	124262912	hypothetical protein
30	Mpe_B0373	323080..323640 [+], 561	124262913	putative pilus assembly protein, TrhF
31	Mpe_B0374 (traF)	323651..324604 [+], 954	124262914	sex pilus assembly protein	TraF_F
32	Mpe_B0375 (traH)	324628..326073 [+], 1446	124262915	sex pilus assembly protein	TraH_F
33	Mpe_B0376	326090..329608 [+], 3519	124262916	hypothetical protein	TraG_F
34	Mpe_B0377 (dsbA)	329959..330495 [-], 537	124262917	Thiol:disulfide interchange protein
35	Mpe_B0378 (gspE)	330461..332212 [-], 1752	124262918	pili biogenesis ATPase
36	Mpe_B0379 (iagB)	332481..332921 [-], 441	124262919	invasion protein	Orf169_F
37	Mpe_B0380	332946..333905 [+], 960	124262920	hypothetical protein
38	Mpe_B0381 (traN)	333972..335666 [-], 1695	124262921	conjugal transfer mating pair stabilization protein TraN	TraN_F
39	Mpe_B0382	335672..337102 [-], 1431	124262922	hypothetical protein
40	Mpe_B0383	337099..337509 [-], 411	124262923	hypothetical protein
41	Mpe_B0384	337718..338038 [+], 321	124262924	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Kane SR; Chakicherla AY; Chain PS; Schmidt R; Shin MW; Legler TC; Scow KM; Larimer FW; Lucas SM; Richardson PM; Hristova KR (2007). Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1. J Bacteriol. 189(5):1931-45. [PudMed:17158667]