SecReT4

T4SS
References

T4SS ID	118
Strain	Yersinia pestis Pestoides F
Replicon	plasmid MT [Browse all T4SS(s) in this replicon]
Accession	NC_009378
Location	83962..112172
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	1	1	1	1	1
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	0

The information of T4SS components from NC_009378

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	YPDSF_4102	80272..80748 [-], 477	145597266	hypothetical protein
2	YPDSF_4103	80830..81624 [-], 795	145597267	hypothetical protein
3	YPDSF_4156	81877..82599 [+], 723	145597320	hypothetical protein
4	YPDSF_4104	82633..83841 [+], 1209	145597268	transposase
5	YPDSF_4105	83962..86781 [-], 2820	145597269	conjugal transfer mating pair stabilization protein TraG	TraG_F
6	YPDSF_4106	86781..88154 [-], 1374	145597270	conjugal transfer pilus assembly protein TraH	TraH_F
7	YPDSF_4107	88151..88696 [-], 546	145597271	conjugal transfer protein TrbB
8	YPDSF_4108	88686..88934 [-], 249	145597272	conjugal transfer pilin chaperone TraQ	TraQ_F
9	YPDSF_4109	88951..89700 [-], 750	145597273	conjugal pilus assembly protein TraF	TraF_F
10	YPDSF_4110	89951..91801 [-], 1851	145597274	conjugal transfer mating pair stabilization protein TraN	TraN_F
11	YPDSF_4111	91798..92568 [-], 771	145597275	conjugative transfer protein	TrbC_F
12	YPDSF_4112	92444..93382 [-], 939	145597276	conjugal transfer pilus assembly protein TraU	TraU_F
13	YPDSF_4113	93433..94080 [-], 648	145597277	conjugal transfer pilus assembly protein TraW	TraW_F
14	YPDSF_4114	94080..94427 [-], 348	145597278	conjugative transfer protein
15	YPDSF_4115	94424..97054 [-], 2631	145597279	conjugal transfer ATP-binding protein TraC	TraC_F
16	YPDSF_4116	97047..97613 [-], 567	145597280	conjugal transfer protein TraP
17	YPDSF_4117	98524..99063 [-], 540	145597281	conjugal transfer protein TraV	TraV_F
18	YPDSF_4118	99085..100479 [-], 1395	145597282	conjugal transfer pilus assembly protein TraB	TraB_F
19	YPDSF_4119	100466..101209 [-], 744	145597283	conjugal transfer protein TraK	TraK_F
20	YPDSF_4120	101196..101762 [-], 567	145597284	conjugal transfer pilus assembly protein TraE	TraE_F
21	YPDSF_4121	101777..102082 [-], 306	145597285	conjugal transfer pilus assembly protein TraL	TraL_F
22	YPDSF_4122	102233..102583 [-], 351	145597286	conjugal transfer pilin subunit TraA	TraA_F
23	YPDSF_4123	102793..104001 [-], 1209	145597287	transposase
24	YPDSF_4124	104025..106193 [+], 2169	145597288	conjugal transfer protein TraD	TraD_F
25	YPDSF_4125	106193..111433 [+], 5241	145597289	conjugal transfer nickase/helicase TraI	TraI_F
26	YPDSF_4126	111435..112172 [+], 738	145597290	conjugative transfer fimbrial acetylation protein	TraX_F
27	YPDSF_4127	112239..112958 [+], 720	145597291	conjugal transfer fertility inhibition protein FinO
28	YPDSF_4128	112951..113742 [+], 792	145597292	hypothetical protein
29	YPDSF_4129	113890..114444 [+], 555	145597293	endonuclease
30	YPDSF_4130	114854..115717 [+], 864	145597294	replication protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009378