SecReT4

T4SS
References

T4SS ID	567
Strain	Orientia tsutsugamushi str. Ikeda
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_010793
Location	168769..219172
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	2	2	1	1	1	2	3	2
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	0	0	0	2	0	3	1	0	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	2	0

The information of T4SS components from NC_010793

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	OTT_0169	164258..164770 [-], 513	189183076	hypothetical protein
2	OTT_0170	166062..166856 [-], 795	189183077	ComL-like lipoprotein
3	OTT_0171 (lspA)	167151..167657 [+], 507	189183078	lipoprotein signal peptidase
4	OTT_0172	168769..170226 [+], 1458	189183079	conjugative transfer protein TraA	TraI_F
5	OTT_0173	170241..171038 [+], 798	189183080	conjugative transfer protein TraA
6	OTT_0174	171302..171772 [+], 471	189183081	conjugative transfer protein TraI
7	OTT_0175	171801..172121 [+], 321	189183082	conjugative transfer protein TraI
8	OTT_0176	172114..172485 [+], 372	189183083	conjugative transfer protein TraI
9	OTT_0177	172509..173597 [-], 1089	189183084	conjugative transfer protein TraA
10	OTT_0178	173876..174331 [+], 456	189183085	conjugative transfer protein TraD
11	OTT_0179	174373..175158 [-], 786	189183086	exodeoxyribonuclease III
12	OTT_0180	175772..177715 [-], 1944	189183087	hypothetical protein
13	OTT_0181	178715..179137 [+], 423	189183088	transposase
14	OTT_0182	179469..181364 [+], 1896	189183089	repeat-containing protein A_01
15	OTT_0183	181490..181771 [-], 282	189183090	replicative DNA helicase, DnaB
16	OTT_0184	181908..182132 [-], 225	189183091	transposase
17	OTT_0185	182339..183085 [+], 747	189183092	transposase
18	OTT_0186	183428..184003 [-], 576	189183093	hypothetical protein
19	OTT_0187	184092..184547 [-], 456	189183094	conjugative transfer protein TraD
20	OTT_0188	184843..184944 [+], 102	189183095	conjugative transfer protein TraA
21	OTT_0189	185050..187659 [+], 2610	189183096	conjugative transfer protein TraA	TraI_F
22	OTT_0190	187990..189060 [+], 1071	189183097	conjugative transfer protein TraI
23	OTT_0191	189112..189672 [+], 561	189183098	transposase
24	OTT_0192	189688..190656 [-], 969	189183099	transposase
25	OTT_0193	190923..191309 [+], 387	189183100	integrase
26	OTT_0194	191374..191667 [+], 294	189183101	hypothetical protein
27	OTT_0195	192106..192372 [+], 267	189183102	conjugative transfer protein TraU	TraU_F
28	OTT_0196	192419..192817 [+], 399	189183103	conjugative transfer protein TraN
29	OTT_0197	192854..193039 [+], 186	189183104	conjugative transfer protein TraN
30	OTT_0198	193050..193214 [+], 165	189183105	conjugative transfer protein TraF
31	OTT_0199	193211..194104 [+], 894	189183106	conjugative transfer protein TraH	TraH_F
32	OTT_0200	194269..194613 [+], 345	189183107	conjugative transfer protein TraD
33	OTT_0201	194602..195183 [-], 582	189183108	conjugative transfer protein TraD	TraD_F
34	OTT_0202	195143..195601 [-], 459	189183109	conjugative transfer protein TraD
35	OTT_0203	195607..196806 [-], 1200	189183110	conjugative transfer protein TraG	TraG_F
36	OTT_0204	196889..197857 [-], 969	189183111	transposase
37	OTT_0205	198028..198363 [-], 336	189183112	conjugative transfer protein TraG	TraG_F
38	OTT_0206	198363..198842 [-], 480	189183113	conjugative transfer protein TraH	TraH_F
39	OTT_0207	198772..199437 [-], 666	189183114	conjugative transfer protein TraH	TraH_F
40	OTT_0208	199519..199665 [-], 147	189183115	conjugative transfer protein TraH
41	OTT_0209	199662..200384 [-], 723	189183116	conjugative transfer protein TraF	TraF_F
42	OTT_0210	200588..201766 [-], 1179	189183117	ankyrin repeat-containing protein 04_01
43	OTT_0211	201923..203614 [-], 1692	189183118	conjugative transfer protein TraN	TraN_F
44	OTT_0212	203611..203931 [-], 321	189183119	conjugative transfer protein TrbC	TrbC_F
45	OTT_0213	204016..204699 [-], 684	189183120	conjugative transfer protein TraU	TraU_F
46	OTT_0214	205067..206104 [+], 1038	189183121	ankyrin repeat-containing protein 05_01
47	OTT_0215	206018..207874 [-], 1857	189183122	conjugative transfer protein TraC	TraC_F
48	OTT_0216	207786..208115 [-], 330	189183123	hypothetical protein	TraV_F
49	OTT_0217	208115..208384 [-], 270	189183124	conjugative transfer protein TraB	TraB_F
50	OTT_0218	208347..209165 [-], 819	189183125	conjugative transfer protein TraB	TraB_F
51	OTT_0219	209484..209813 [-], 330	189183126	hypothetical protein
52	OTT_0220	210178..210654 [-], 477	189183127	hypothetical protein
53	OTT_0221	210651..211202 [-], 552	189183128	conjugative transfer protein TraE	TraE_F
54	OTT_0222	211202..211537 [-], 336	189183129	hypothetical protein
55	OTT_0223	212022..212912 [-], 891	189183130	integrase
56	OTT_0224	213349..213648 [+], 300	189183131	hypothetical protein
57	OTT_0225	213629..215431 [+], 1803	189183132	conjugative transfer protein TraC	TraC_F
58	OTT_0226	215330..216340 [-], 1011	189183133	ankyrin repeat-containing protein 06_01
59	OTT_0227	216495..217082 [+], 588	189183134	conjugative transfer protein TraU	TraU_F
60	OTT_0228	217167..217487 [+], 321	189183135	conjugative transfer protein TrbC	TrbC_F
61	OTT_0229	217484..218251 [+], 768	189183136	conjugative transfer protein TraN
62	OTT_0230	218540..219172 [+], 633	189183137	conjugative transfer protein TraN	TraN_F
63	OTT_0231	219424..220932 [+], 1509	189183138	TPR repeat-containing protein 03
64	OTT_0232	221043..221489 [+], 447	189183139	hypothetical protein
65	OTT_0233	221766..222332 [+], 567	189183140	conjugative transfer protein TraF
66	OTT_0234	222612..222809 [-], 198	189183141	transposase
67	OTT_0235	223065..223721 [-], 657	189183142	hypothetical protein
68	OTT_0236	223718..224077 [-], 360	189183143	ankyrin repeat-containing protein 03_02

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Nakayama K; Yamashita A; Kurokawa K; Morimoto T; Ogawa M; Fukuhara M; Urakami H; Ohnishi M; Uchiyama I; Ogura Y; Ooka T; Oshima K; Tamura A; Hattori M; Hayashi T (2008). The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution. DNA Res. 15(4):185-99. [PudMed:18508905]