SecReT4

T4SS
References

T4SS ID	555
Strain	Novosphingobium aromaticivorans DSM 12444
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_007794
Location	2295560..2328365
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	0	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	0

The information of T4SS components from NC_007794

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Saro_2149	2291907..2292542 [+], 636	87200165	hypothetical protein
2	Saro_2150	2292560..2292910 [-], 351	87200166	hypothetical protein
3	Saro_2151	2292907..2293533 [-], 627	87200167	cation efflux protein
4	Saro_2152	2293603..2294016 [+], 414	87200168	MerR family transcriptional regulator
5	Saro_2153	2294101..2294346 [-], 246	87200169	phage transcriptional regulator AlpA
6	Saro_2154	2294394..2294855 [-], 462	87200170	hypothetical protein
7	Saro_2155	2295204..2295533 [+], 330	87200171	hypothetical protein
8	Saro_2156	2295560..2295847 [+], 288	87200172	hypothetical protein	TraL_F
9	Saro_2157	2295859..2296431 [+], 573	87200173	hypothetical protein	TraE_F
10	Saro_2158	2296431..2297189 [+], 759	87200174	hypothetical protein	TraK_F
11	Saro_2159	2297182..2298522 [+], 1341	87200175	TraB pilus assembly	TraB_F
12	Saro_2160	2298519..2299433 [+], 915	87200176	hypothetical protein
13	Saro_2161	2299438..2300247 [+], 810	87200177	hypothetical protein	TraV_F
14	Saro_2162	2300247..2302790 [+], 2544	87200178	ATPase	TraC_F
15	Saro_2163	2302820..2303212 [+], 393	87200179	hypothetical protein
16	Saro_2164	2303209..2303616 [+], 408	87200180	hypothetical protein
17	Saro_2165	2303603..2304127 [+], 525	87200181	Type IV secretory pathway protease TraF-like	TraF_F
18	Saro_2166	2304124..2304771 [+], 648	87200182	hypothetical protein	TraW_F
19	Saro_2167	2304768..2305883 [+], 1116	87200183	hypothetical protein	TraU_F
20	Saro_2168	2305885..2307321 [+], 1437	87200184	hypothetical protein	TraH_F
21	Saro_2169	2307355..2310057 [+], 2703	87200185	TraG-like	TraG_F
22	Saro_2170	2310068..2310298 [-], 231	87200186	hypothetical protein
23	Saro_2171	2310400..2310762 [-], 363	87200187	hypothetical protein
24	Saro_2172	2310734..2313502 [-], 2769	87200188	helicase-like protein
25	Saro_2173	2313519..2316458 [-], 2940	87200189	DNA methylase containing a Zn-ribbon
26	Saro_2174	2316468..2317040 [-], 573	87200190	hypothetical protein
27	Saro_2175	2317040..2320144 [-], 3105	87200191	hypothetical protein
28	Saro_2176	2320276..2321145 [-], 870	87200192	hypothetical protein
29	Saro_2177	2321259..2321453 [-], 195	87200193	hypothetical protein
30	Saro_2178	2321554..2322195 [+], 642	87200194	phage repressor
31	Saro_2179	2322489..2322932 [+], 444	87200195	hypothetical protein
32	Saro_2180	2322932..2323129 [+], 198	87200196	hypothetical protein
33	Saro_2181	2323154..2323393 [-], 240	87200197	hypothetical protein
34	Saro_2182	2323464..2324249 [-], 786	87200198	hypothetical protein
35	Saro_2183	2324303..2325931 [-], 1629	87200199	TrwC protein	TraI_F
36	Saro_2184	2325969..2328365 [-], 2397	87200200	Type IV secretory pathway VirD4 components-like protein	TraD_F
37	Saro_2185	2328355..2328687 [-], 333	87200201	hypothetical protein
38	Saro_2186	2328903..2329247 [+], 345	87200202	hypothetical protein
39	Saro_2187	2329126..2329320 [+], 195	87200203	hypothetical protein
40	Saro_2188	2329423..2329659 [-], 237	87200204	hypothetical protein
41	Saro_2189	2329845..2330213 [+], 369	87200205	hypothetical protein
42	Saro_2190	2330329..2330718 [-], 390	87200206	single-strand binding protein
43	Saro_2191	2331079..2331507 [-], 429	87200207	hypothetical protein
44	Saro_2192	2331518..2331979 [-], 462	87200208	hypothetical protein
45	Saro_2193	2332102..2333055 [-], 954	87200209	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_007794