SecReT4

T4SS
References

T4SS ID	515
Strain	Vibrio vulnificus plasmid pC4602-1 (NC_009702)
Replicon	plasmid pC4602-1 [Browse all T4SS(s) in this replicon]
Accession	NC_009702
Location	20379..49553
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
Experimental investigation has been performed on this T4SS.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	0	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	1

The information of T4SS components from NC_009702

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pC46021_44 (vpa30)	16052..16897 [+], 846	153971611	putative transposase
2	pC46021_45 (vpa31)	17691..18521 [-], 831	153971612	hypothetical protein
3	pC46021_46 (vpa32)	19214..19402 [+], 189	153971613	hypothetical protein
4	pC46021_47 (vpa33)	19257..19526 [-], 270	153971614	hypothetical protein
5	pC46021_48 (vpa34)	19723..20031 [-], 309	153971615	hypothetical protein
6	pC46021_05 (traA)	20379..20666 [+], 288	153971616	putative conjugative transfer protein TraA	TraA_F
7	pC46021_14 (traL)	20676..20978 [+], 303	153971617	putative conjugative transfer protein TraL	TraL_F
8	pC46021_08 (traE)	20993..21568 [+], 576	153971618	putative conjugative transfer protein TraE	TraE_F
9	pC46021_13 (traK)	21555..22340 [+], 786	153971619	putative conjugative transfer protein TraK	TraK_F
10	pC46021_06 (traB)	22330..23862 [+], 1533	153971620	putative conjugative transfer protein TraB	TraB_F
11	pC46021_49 (vpa40)	23868..24260 [+], 393	153971621	hypothetical protein
12	pC46021_50 (vpa41)	24273..26822 [+], 2550	153971622	putative conjugative transfer protein TraC	TraC_F
13	pC46021_17 (traW)	26785..27504 [+], 720	153971623	putative conjugative transfer protein TraW	TraW_F
14	pC46021_16 (traU)	27501..28511 [+], 1011	153971624	putative conjugative transfer protein TraU	TraU_F
15	pC46021_51 (vpa44)	28521..28754 [+], 234	153971625	hypothetical protein
16	pC46021_52 (vpa45)	28768..29481 [+], 714	153971626	putative conjugative transfer protein TrbC	TrbC_F
17	pC46021_15 (traN)	29518..31242 [+], 1725	153971627	putative conjugative transfer protein TraN	TraN_F
18	pC46021_09 (traF)	31290..32069 [+], 780	153971628	putative conjugative transfer protein TraF	TraF_F
19	pC46021_53 (vpa48)	32087..32500 [+], 414	153971629	putative conjugative transfer protein TrbB
20	pC46021_11 (traH)	32497..33903 [+], 1407	153971630	putative conjugative transfer protein TraH	TraH_F
21	pC46021_10 (traG)	33907..36720 [+], 2814	153971631	putative conjugative transfer protein TraG	TraG_F
22	pC46021_54 (vpa51)	36803..37339 [+], 537	153971632	hypothetical protein
23	pC46021_55 (vpa52)	37471..38499 [-], 1029	153971633	transposase and inactivated derivatives
24	pC46021_56 (vpa53)	38582..39139 [+], 558	153971634	hypothetical protein
25	pC46021_57 (vpa54)	39154..39399 [+], 246	153971635	hypothetical protein
26	pC46021_07 (traD)	40171..42270 [+], 2100	153971636	putative conjugative transfer protein TraD	TraD_F
27	pC46021_12 (traI)	42389..48163 [+], 5775	153971637	putative conjugative transfer protein TraI	TraI_F
28	pC46021_58 (vpa57)	48182..48541 [-], 360	153971638	cysteinyl-tRNA synthetase
29	pC46021_04 (pilT)	49107..49553 [-], 447	153971639	putative PilT protein	Orf169_F
30	pC46021_59 (vpa59)	49636..51018 [-], 1383	153971640	LtrC-like protein
31	pC46021_60 (vpa60)	51216..51482 [+], 267	153971641	hypothetical protein
32	pC46021_61 (vpa61)	51587..51883 [-], 297	153971642	transcriptional regulator, Cro/CI family
33	pC46021_62 (vpa62)	51959..52258 [-], 300	153971643	hypothetical protein
34	pC46021_63 (vpa63)	52296..52514 [-], 219	153971644	hypothetical protein
35	pC46021_64 (vpa64)	52559..52717 [-], 159	153971645	hypothetical protein
36	pC46021_65 (vpa65)	52749..53072 [-], 324	153971646	type I restriction-modification system
37	pC46021_66 (vpa66)	53139..53447 [-], 309	153971647	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Lee CT; Amaro C; Wu KM; Valiente E; Chang YF; Tsai SF; Chang CH; Hor LI (2008). A common virulence plasmid in biotype 2 Vibrio vulnificus and its dissemination aided by a conjugal plasmid. J Bacteriol. 190(5):1638-48. [PudMed:18156267]

This literature contains experimental investigation