SecReT4

T4SS
References

T4SS ID	600
Strain	Acidovorax sp. JS42
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_008782
Location	1578073..1604431
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	0	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_008782

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Ajs_1521	1574583..1574918 [+], 336	121593895	hypothetical protein
2	Ajs_1523	1575551..1577734 [-], 2184	121593896	TonB-dependent siderophore receptor
3	Ajs_1524	1578073..1580844 [-], 2772	121593897	TraG domain-containing protein	TraG_F
4	Ajs_1525	1580866..1582314 [-], 1449	121593898	TraH family protein	TraH_F
5	Ajs_1526	1582324..1583199 [-], 876	121593899	hypothetical protein	TraF_F
6	Ajs_1527	1583210..1583605 [-], 396	121593900	hypothetical protein
7	Ajs_1528	1583596..1586013 [-], 2418	121593901	conjugal transfer mating pair stabilization protein TraN	TraN_F
8	Ajs_1529	1586023..1586775 [-], 753	121593902	hypothetical protein
9	Ajs_1530	1586762..1587787 [-], 1026	121593903	TraU family protein	TraU_F
10	Ajs_1531	1587784..1588422 [-], 639	121593904	membrane lipoprotein lipid attachment site	TraW_F
11	Ajs_1532	1588419..1588802 [-], 384	121593905	hypothetical protein
12	Ajs_1533	1588814..1589398 [-], 585	121593906	hypothetical protein
13	Ajs_1534	1589395..1589751 [-], 357	121593907	hypothetical protein
14	Ajs_1535	1589748..1592330 [-], 2583	121593908	hypothetical protein	TraC_F
15	Ajs_1536	1592338..1592979 [-], 642	121593909	hypothetical protein	TraV_F
16	Ajs_1537	1592976..1593824 [-], 849	121593910	periplasmic thiol:disulfide interchange protein
17	Ajs_1538	1593808..1595226 [-], 1419	121593911	TraB pilus assembly family protein	TraB_F
18	Ajs_1539	1595223..1596230 [-], 1008	121593912	hypothetical protein
19	Ajs_1540	1596217..1596783 [-], 567	121593913	plasmid-like conjugative transfer protein TraE	TraE_F
20	Ajs_1541	1596798..1597097 [-], 300	121593914	TraL family protein	TraL_F
21	Ajs_1542	1597129..1597491 [-], 363	121593915	hypothetical protein
22	Ajs_1543	1597589..1598011 [-], 423	121593916	hypothetical protein
23	Ajs_1544	1598008..1598535 [-], 528	121593917	lytic transglycosylase catalytic subunit	Orf169_F
24	Ajs_1545	1598677..1599174 [-], 498	121593918	hypothetical protein
25	Ajs_1546	1599378..1599686 [-], 309	121593919	hypothetical protein
26	Ajs_1547	1599827..1600099 [+], 273	121593920	helix-turn-helix domain-containing protein
27	Ajs_1548	1600115..1600738 [-], 624	121593921	hypothetical protein
28	Ajs_1549	1600735..1602636 [-], 1902	121593922	hypothetical protein	TraD_F
29	Ajs_1550	1602638..1604431 [-], 1794	121593923	FHA domain-containing protein	TraI_F
30	Ajs_1551	1604485..1605147 [-], 663	121593924	hypothetical protein
31	Ajs_1552	1605148..1605462 [-], 315	121593925	hypothetical protein
32	Ajs_1553	1605739..1606461 [+], 723	121593926	putative phage repressor
33	Ajs_1554	1606545..1607609 [-], 1065	121593927	hypothetical protein
34	Ajs_1555	1607621..1607923 [+], 303	121593928	hypothetical protein
35	Ajs_1556	1607893..1608897 [-], 1005	121593929	phage P4 alpha zinc-binding domain-containing protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008782