SecReT4

T4SS
References

T4SS ID	529
Strain	Shewanella baltica OS223
Replicon	plasmid pS22302 [Browse all T4SS(s) in this replicon]
Accession	NC_011668
Location	3829..31586
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	1	1	0

The information of T4SS components from NC_011668

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Sbal223_4417	436..1416 [+], 981	217980265	domain of unknown function DUF1738
2	Sbal223_4419	1589..2536 [-], 948	217980266	Integrase catalytic region
3	Sbal223_4420	3410..3778 [+], 369	217980267	hypothetical protein
4	Sbal223_4421	3829..9789 [-], 5961	217980268	conjugative transfer relaxase protein TraI	TraI_F
5	Sbal223_4422	9901..10152 [+], 252	217980269	hypothetical protein
6	Sbal223_4423	10251..10430 [-], 180	217980270	hypothetical protein
7	Sbal223_4424	10427..10705 [-], 279	217980271	hypothetical protein
8	Sbal223_4425	10733..12856 [-], 2124	217980272	type IV conjugative transfer system coupling protein TraD	TraD_F
9	Sbal223_4426	12859..13392 [-], 534	217980273	hypothetical protein
10	Sbal223_4427	13430..16243 [-], 2814	217980274	TraG domain protein	TraG_F
11	Sbal223_4428	16246..17634 [-], 1389	217980275	TraH family protein	TraH_F
12	Sbal223_4429	17631..17819 [-], 189	217980276	hypothetical protein
13	Sbal223_4430	17830..18273 [-], 444	217980277	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
14	Sbal223_4431	18270..19004 [-], 735	217980278	hypothetical protein
15	Sbal223_4432	19040..19915 [-], 876	217980279	type-F conjugative transfer system pilin assembly protein TraF	TraF_F
16	Sbal223_4433	19912..21729 [-], 1818	217980280	conjugal transfer mating pair stabilization protein TraN	TraN_F
17	Sbal223_4434	21726..22466 [-], 741	217980281	type-F conjugative transfer system pilin assembly protein TrbC	TrbC_F
18	Sbal223_4435	22489..23502 [-], 1014	217980282	TraU family protein	TraU_F
19	Sbal223_4436	23489..24193 [-], 705	217980283	type-F conjugative transfer system protein TraW	TraW_F
20	Sbal223_4437	24190..24561 [-], 372	217980284	conjugal transfer protein TrbI	TrbC
21	Sbal223_4438	24563..27151 [-], 2589	217980285	type-IV secretion system protein TraC	TraC_F
22	Sbal223_4439	27155..27613 [-], 459	217980286	type IV conjugative transfer system protein TraV	TraV_F
23	Sbal223_4440	27631..29157 [-], 1527	217980287	TraB pilus assembly family protein	TraB_F
24	Sbal223_4441	29154..29969 [-], 816	217980288	type-F conjugative transfer system secretin TraK	TraK_F
25	Sbal223_4442	29969..30535 [-], 567	217980289	type IV conjugative transfer system protein TraE	TraE_F
26	Sbal223_4443	30576..30878 [-], 303	217980290	type IV conjugative transfer system protein TraL	TraL_F
27	Sbal223_4444	30882..31253 [-], 372	217980291	hypothetical protein	TraA_F
28	Sbal223_4445	31308..31586 [-], 279	217980292	hypothetical protein	TraY_F
29	Sbal223_4446	31623..32252 [+], 630	217980293	putative phage repressor
30	Sbal223_4447	32698..33432 [+], 735	217980294	hypothetical protein
31	Sbal223_4448	34178..34333 [+], 156	217980295	Hok/gef cell toxic protein
32	Sbal223_4449	35053..35706 [+], 654	217980296	Methyltransferase type 12

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_011668