SecReT4

T4SS
References

T4SS ID	534
Strain	Shewanella baltica OS223
Replicon	plasmid pS22303 [Browse all T4SS(s) in this replicon]
Accession	NC_011665
Location	18469..45433
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	1	1	0

The information of T4SS components from NC_011665

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Sbal223_4491	14890..15264 [-], 375	217975708	hypothetical protein
2	Sbal223_4492	15599..15805 [-], 207	217975709	Hok/gef cell toxic protein
3	Sbal223_4493	16500..17234 [-], 735	217975710	hypothetical protein
4	Sbal223_4494	17658..18353 [-], 696	217975711	putative phage repressor
5	Sbal223_4495	18469..18645 [+], 177	217975712	hypothetical protein	TraY_F
6	Sbal223_4496	18700..19086 [+], 387	217975713	hypothetical protein	TraA_F
7	Sbal223_4497	19090..19392 [+], 303	217975714	type IV conjugative transfer system protein TraL	TraL_F
8	Sbal223_4498	19433..19999 [+], 567	217975715	type IV conjugative transfer system protein TraE	TraE_F
9	Sbal223_4499	19999..20814 [+], 816	217975716	type-F conjugative transfer system secretin TraK	TraK_F
10	Sbal223_4500	20811..22340 [+], 1530	217975717	TraB pilus assembly family protein	TraB_F
11	Sbal223_4501	22361..22816 [+], 456	217975718	type IV conjugative transfer system protein TraV	TraV_F
12	Sbal223_4502	22820..25408 [+], 2589	217975719	type-IV secretion system protein TraC	TraC_F
13	Sbal223_4503	25410..25781 [+], 372	217975720	conjugal transfer protein TrbI
14	Sbal223_4504	25778..26479 [+], 702	217975721	type-F conjugative transfer system protein TraW	TraW_F
15	Sbal223_4505	26466..27473 [+], 1008	217975722	TraU family protein	TraU_F
16	Sbal223_4506	27496..28233 [+], 738	217975723	type-F conjugative transfer system pilin assembly protein TrbC	TrbC_F
17	Sbal223_4507	28230..30044 [+], 1815	217975724	conjugal transfer mating pair stabilization protein TraN	TraN_F
18	Sbal223_4508	30041..30916 [+], 876	217975725	type-F conjugative transfer system pilin assembly protein TraF	TraF_F
19	Sbal223_4509	30952..31689 [+], 738	217975726	hypothetical protein
20	Sbal223_4510	31686..32129 [+], 444	217975727	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
21	Sbal223_4511	32141..32305 [+], 165	217975728	hypothetical protein
22	Sbal223_4512	32302..33690 [+], 1389	217975729	TraH family protein	TraH_F
23	Sbal223_4513	33693..36521 [+], 2829	217975730	TraG domain protein	TraG_F
24	Sbal223_4514	36559..37092 [+], 534	217975731	hypothetical protein
25	Sbal223_4515	37095..39221 [+], 2127	217975732	type IV conjugative transfer system coupling protein TraD	TraD_F
26	Sbal223_4516	39235..39414 [+], 180	217975733	hypothetical protein
27	Sbal223_4517	39473..45433 [+], 5961	217975734	conjugative transfer relaxase protein TraI	TraI_F
28	Sbal223_4518	45496..45738 [-], 243	217975735	hypothetical protein
29	Sbal223_4519	45792..46145 [-], 354	217975736	hypothetical protein
30	Sbal223_4520	46728..47003 [-], 276	217975737	type I restriction-modification system methyltransferase subunit
31	Sbal223_4521	47069..48049 [-], 981	217975738	domain of unknown function DUF1738
32	Sbal223_4522	48012..48356 [-], 345	217975739	hypothetical protein
33	Sbal223_4523	48431..48601 [-], 171	217975740	hypothetical protein
34	Sbal223_4524	48613..48957 [-], 345	217975741	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_011665