NZ_HG7388673996347..4028227

MGE detailed information

MGE type: Genomic_island        MGE length: 31881 bp
Accession: NZ_HG738867        Location: 3996347..4028227         Organism: Escherichia coli str. K-12 substr. MC4100 strain K-12       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BN896_RS19750 (BN896_2403) 3992531..3993799 - 1269 WP_000271909.1 L-2-hydroxyglutarate oxidase -
BN896_RS19755 (BN896_2402) 3993819..3994796 - 978 WP_000993126.1 carbon starvation induced protein CsiD -
BN896_RS25285 3995132..3997384 - 2253 Protein_3744 hypothetical protein -
BN896_RS25290 3998770..4000143 + 1374 Protein_3745 DUF5507 domain-containing protein -
BN896_RS24095 4000507..4000716 + 210 WP_072097107.1 recombinase family protein -
BN896_RS24105 4000871..4000990 + 120 WP_001120794.1 hypothetical protein -
BN896_RS24840 (BN896_2401) 4001055..4005635 + 4581 WP_010723187.1 putative autotransporter VF
BN896_RS19805 (BN896_2400) 4005999..4006328 - 330 WP_001094400.1 type IV toxin-antitoxin system toxin YpjF Toxin Detail
BN896_RS19810 (BN896_2399) 4006349..4006666 - 318 WP_000072690.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
BN896_RS24155 (BN896_2398) 4006704..4006904 - 201 WP_001395452.1 DUF987 domain-containing protein -
BN896_RS19815 (BN896_2397) 4006913..4007395 - 483 WP_001407480.1 RadC family protein -
BN896_RS19820 (BN896_2396) 4007404..4007862 - 459 WP_000211841.1 antirestriction protein -
BN896_RS24160 4007965..4008188 - 224 Protein_3754 DUF905 family protein -
BN896_RS19825 (BN896_2395) 4008760..4010463 - 1704 WP_000896263.1 hypothetical protein -
BN896_RS19830 4010605..4011614 + 1010 Protein_3756 arsenic transporter -
BN896_RS19835 4011627..4011941 + 315 WP_000065803.1 arsenate reductase -
BN896_RS19840 (BN896_2394) 4012166..4012633 - 468 WP_000702495.1 hypothetical protein -
BN896_RS19845 (BN896_2393) 4012657..4013100 - 444 WP_000824222.1 hypothetical protein -
BN896_RS19850 (BN896_2392) 4013100..4013336 - 237 WP_001144029.1 hypothetical protein -
BN896_RS19855 (BN896_2391) 4013377..4014078 - 702 WP_000189409.1 WYL domain-containing protein -
BN896_RS19860 (BN896_2390) 4014295..4015116 - 822 WP_000197391.1 DUF945 domain-containing protein -
BN896_RS19865 (BN896_2389) 4015208..4016071 - 864 WP_000787597.1 GTPase family protein -
BN896_RS19870 (BN896_2388) 4016426..4016797 - 372 WP_000461704.1 type II toxin-antitoxin system antitoxin RnlB Antitoxin Detail
BN896_RS19875 (BN896_2387) 4016790..4017863 - 1074 WP_000155570.1 type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA Toxin Detail
BN896_RS19880 (BN896_2386) 4018005..4018268 + 264 WP_000502050.1 DUF1524 domain-containing protein -
BN896_RS19885 (BN896_2385) 4018628..4020244 + 1617 WP_000445380.1 anti-bacteriophage protein AbpA -
BN896_RS19890 (BN896_2384) 4020241..4022430 + 2190 WP_000136402.1 DEAD/DEAH box helicase -
BN896_RS19895 (BN896_2383) 4022608..4023234 - 627 WP_000220524.1 inovirus Gp2 family protein -
BN896_RS19900 (BN896_2382) 4023387..4024796 - 1410 WP_000481742.1 DUF3987 domain-containing protein -
BN896_RS19905 (BN896_2381) 4024925..4025137 - 213 WP_001065343.1 DNA-binding transcriptional activator AlpA -
BN896_RS19910 (BN896_2380) 4025181..4026137 + 957 WP_000510827.1 hypothetical protein -
BN896_RS19915 (BN896_2379) 4026381..4027622 - 1242 WP_000101723.1 Prophage integrase IntA ; Integrase Integrase
BN896_RS19920 (BN896_2378) 4028403..4028885 - 483 WP_000162574.1 SsrA-binding protein SmpB -
BN896_RS19925 (BN896_2377) 4029056..4029493 + 438 WP_001300750.1 type II toxin-antitoxin system toxin RatA -
BN896_RS19930 (BN896_2376) 4029483..4029773 + 291 WP_001117838.1 RnfH family protein -
BN896_RS19935 (BN896_2375) 4029835..4030176 - 342 WP_001203437.1 outer membrane protein assembly factor BamE -
BN896_RS19940 (BN896_2374) 4030325..4031986 - 1662 WP_000880910.1 DNA repair protein RecN -
BN896_RS19945 (BN896_2373) 4032072..4032950 - 879 WP_001059169.1 NAD(+) kinase -

Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20085, TA20086 HG738867 3996347..4028227 0
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20085, TA20086 HG738867 3996347..4028227 0
Escherichia coli DH1 Genomic island TA27158, TA27159 NC_017625 1096328..1128208 0
Escherichia coli KLY Genomic island TA47514, TA47515 NZ_CP008801 2732681..2774566 0.007
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA49432, TA49433 NZ_CP009685 912721..944599 0
Escherichia coli K-12 strain K-12 MG1655 Genomic island TA52559, TA52560 NZ_CP010441 3492901..3534786 0.007
Escherichia coli strain RR1 Genomic island TA53416, TA53417 NZ_CP011113 2713006..2754891 0.008
Escherichia coli strain USML2 Genomic island TA53491, TA53492 NZ_CP011124 2091893..2123773 0
Escherichia coli strain SQ37 Genomic island TA53855, TA53856 NZ_CP011320 2753399..2795284 0.007
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA57296, TA57297 NZ_CP012868 1854222..1886102 0
Escherichia coli strain K-12 substr. MG1655_TMP32XR1 Genomic island TA57327, TA57328 NZ_CP012869 1854222..1886102 0
Escherichia coli strain K-12 substr. MG1655_TMP32XR2 Genomic island TA57358, TA57359 NZ_CP012870 1854222..1886102 0
Escherichia coli strain HST04 Genomic island TA59659, TA59660 NZ_CP013952 3102807..3134687 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA60382, TA60383 NZ_CP014225 953359..995244 0.007
Escherichia coli str. K-12 substr. MG1655 strain JW5437-1 Genomic island TA60767, TA60768 NZ_CP014348 2546240..2578120 0
Escherichia coli strain ER1821R Genomic island TA64127, TA64128 NZ_CP016018 1096329..1128209 0
Escherichia coli strain tolC- Genomic island TA70541, TA70542 NZ_CP018801 1098834..1130714 0
Escherichia coli strain LIM Genomic island TA92814, TA92815 NZ_CP026027 2750373..2792258 0.007
Escherichia coli strain 9A Genomic island TA93915, TA93916 NZ_CP026343 2758643..2788237 0.003
Escherichia coli strain 7FA Genomic island TA94044, TA94045 NZ_CP026346 2756159..2788238 0.001
Escherichia coli strain C600 Genomic island TA108571, TA108572 NZ_CP031214 1140616..1172496 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA112063, TA112064 NZ_CP032667 1095941..1127820 0
Escherichia coli strain WCHEC035053S1G0 Genomic island TA116263, TA116264 NZ_CP034595 953306..986524 0.001
Escherichia coli strain MT102 Genomic island TA117025, TA117026 NZ_CP034953 1097362..1129242 0
Escherichia coli strain S17-1 Genomic island TA126442, TA126443 NZ_CP040667 631404..664088 0.001
Escherichia coli strain ATCC BAA-196 Genomic island TA136295, TA136296 NZ_CP042865 1097784..1129664 0
Escherichia coli strain ATCC BAA-196 Genomic island TA136326, TA136327 NZ_CP042867 1097693..1129572 0
Escherichia coli O16:H48 strain PG20180172 Genomic island TA137398, TA137399 NZ_CP043183 1100228..1132108 0
Escherichia coli O16:H48 strain PG20180171 Genomic island TA137439, TA137440 NZ_CP043185 1482765..1524650 0.007
Escherichia coli O16:H48 strain PG20180170 Genomic island TA137466, TA137467 NZ_CP043187 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180175 Genomic island TA137497, TA137498 NZ_CP043189 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180173 Genomic island TA137529, TA137530 NZ_CP043191 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180063 Genomic island TA137559, TA137560 NZ_CP043193 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180062 Genomic island TA137590, TA137591 NZ_CP043195 1388293..1420173 0
Escherichia coli O16:H48 strain PG20180061 Genomic island TA137630, TA137631 NZ_CP043197 3079977..3111857 0
Escherichia coli O16:H48 strain PG20180059 Genomic island TA137699, TA137700 NZ_CP043201 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180058 Genomic island TA137732, TA137733 NZ_CP043203 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180054 Genomic island TA137765, TA137766 NZ_CP043205 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180053 Genomic island TA137798, TA137799 NZ_CP043207 1100934..1130019 0.002
Escherichia coli O16:H48 strain PG20180052 Genomic island TA137831, TA137832 NZ_CP043209 1100229..1132109 0
Escherichia coli O16:H48 strain PG20180050 Genomic island TA137864, TA137865 NZ_CP043211 1385204..1417084 0
Escherichia coli strain DH5alpha Genomic island TA142444, TA142445 NZ_CP045741 2145946..2178101 0.001
Escherichia coli strain C439 Genomic island TA143402, TA143403 NZ_CP046025 1101565..1133445 0
Escherichia coli K-12 Genomic island TA145455, TA145456 NZ_CP047127 2965953..2997820 0
Escherichia coli strain WF5-5-T2 Genomic island TA150556, TA150557 NZ_CP049112 1099311..1131192 0
Escherichia coli strain NEB10-beta Genomic island TA157113, TA157114 NZ_CP053604 2832052..2873937 0.007
Escherichia coli strain AML001_ev02 Genomic island TA173700, TA173701 NZ_CP062240 2749518..2781597 0.001
Escherichia coli strain CV601 Genomic island TA186389, TA186390 NZ_CP067994 1101523..1133403 0
Escherichia coli strain CY598 Genomic island TA187107, TA187108 NZ_CP068283 2804676..2838091 0.002
Escherichia coli strain BTH101 Genomic island TA194161, TA194162 NZ_CP070482 4575478..4607358 0
Escherichia coli strain K-12 J53 Genomic island TA194804, TA194805 NZ_CP070962 772259..804137 0
Escherichia coli strain K1508 Genomic island TA197277, TA197278 NZ_CP072054 3996347..4028227 0
Escherichia coli strain T159A Genomic island TA199401, TA199402 NZ_CP072986 1101565..1133445 0
Escherichia coli strain K-12 substr. AB1157 Genomic island TA205641, TA205640 NZ_CP076404 2702850..2744735 0.007
Escherichia coli strain DH5a Genomic island TA205734, TA205735 NZ_CP076470 2963670..2995550 0
Escherichia coli strain GB2005 Genomic island TA209815, TA209816 NZ_CP079735 1108899..1140779 0
Escherichia coli strain GB2005-delet-a-f Genomic island TA209842, TA209843 NZ_CP079736 1108906..1139845 0.001
Escherichia coli strain EC2648-Vir1 Genomic island TA216837, TA216838 NZ_CP083610 2579796..2611676 0
Escherichia coli strain EC2648-Vir2 Genomic island TA217882, TA217883 NZ_CP083990 1098334..1130249 0.001
Escherichia coli strain EC2648-R1 Genomic island TA218202, TA218203 NZ_CP084205 1098334..1128124 0.002
Escherichia coli strain EC2648-R1-1 Genomic island TA218243, TA218244 NZ_CP084207 1907475..1939355 0
Escherichia coli strain EC2648-R2 Genomic island TA218274, TA218275 NZ_CP084209 1098334..1130214 0
Escherichia coli strain PJ-T13 Genomic island TA224728, TA224729 NZ_CP087110 953305..986523 0.001
Escherichia coli strain DOC14 Genomic island TA232615, TA232616 NZ_CP091065 914319..946199 0
Escherichia coli strain ER2683 Genomic island TA237829, TA237830 NZ_CP093221 2218271..2250151 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA246413, TA246414 NZ_CP097881 1096295..1128175 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA246439, TA246440 NZ_CP097882 1097496..1129376 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA246465, TA246466 NZ_CP097883 1097496..1129376 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA246492, TA246493 NZ_CP097884 1722629..1754509 0
Escherichia coli strain EMG2 Genomic island TA249137, TA249138 NZ_CP099588 1098191..1130071 0
Escherichia coli strain WG1 Genomic island TA249168, TA249169 NZ_CP099590 1103772..1135652 0
Escherichia coli strain THB42-F1 Genomic island TA257591, TA257592 NZ_CP104326 1097656..1129536 0
Escherichia coli strain THB42-F2 Genomic island TA257622, TA257623 NZ_CP104328 1098637..1130517 0
Escherichia coli strain THB42-F3 Genomic island TA257652, TA257653 NZ_CP104330 1098334..1130214 0
Escherichia coli strain SY22A6 Genomic island TA260121, TA260122 NZ_CP106994 1101759..1133639 0
Escherichia coli strain SY22B3 Genomic island TA260144, TA260145 NZ_CP106995 1101759..1133639 0
Escherichia coli strain SY22D8 Genomic island TA260167, TA260168 NZ_CP106996 1101759..1133639 0
Escherichia coli strain SY22B6 Genomic island TA260190, TA260191 NZ_CP106997 1101759..1133639 0
Escherichia coli strain SY221 Genomic island TA260213, TA260214 NZ_CP106998 1101759..1133639 0
Escherichia coli strain SY22A4 Genomic island TA260236, TA260237 NZ_CP106999 1101759..1133639 0
Escherichia coli strain SY22B2 Genomic island TA260259, TA260260 NZ_CP107000 1101759..1133639 0
Escherichia coli strain SY22B5 Genomic island TA260282, TA260283 NZ_CP107001 1101759..1133639 0
Escherichia coli strain SY22C3 Genomic island TA260305, TA260306 NZ_CP107002 1101759..1133639 0
Escherichia coli strain SY22B1 Genomic island TA260328, TA260329 NZ_CP107003 1101759..1133639 0
Escherichia coli strain SY22A3 Genomic island TA260351, TA260352 NZ_CP107004 1101759..1133639 0
Escherichia coli strain SY22A1 Genomic island TA260374, TA260375 NZ_CP107005 1101759..1133639 0
Escherichia coli strain THB42-F4 Genomic island TA264299, TA264298 NZ_CP110814 1098445..1130325 0
Escherichia coli strain THB42-F5 Genomic island TA264330, TA264331 NZ_CP110816 1098334..1130214 0
Escherichia coli strain TSW4881-W1 Genomic island TA264391, TA264392 NZ_CP110859 1101896..1133776 0
Escherichia coli strain J53-p133 Genomic island TA264719, TA264720 NZ_CP110999 953306..986524 0.001
Escherichia coli strain J53-p131 Genomic island TA264748, TA264749 NZ_CP111004 953306..986524 0.001
Escherichia coli strain J53-p130 Genomic island TA264776, TA264777 NZ_CP111008 953306..986524 0.001
Escherichia coli strain CM13 Genomic island TA266953, TA266954 NZ_CP114893 2323387..2360392 0.003
Escherichia coli strain CM93 Genomic island TA267028, TA267029 NZ_CP114896 2212574..2254459 0.007
Escherichia coli strain MLI110 Genomic island TA269792, TA269793 NZ_CP117010 1095150..1130681 0.004
Escherichia coli strain JM109 Genomic island TA272556, TA272557 NZ_CP117962 3374655..3406535 0
Escherichia coli strain HT-946 Genomic island TA276659, TA276660 NZ_CP122316 94764..126644 0
Escherichia coli strain HT873X1 Genomic island TA276721, TA276722 NZ_CP122318 128178..160058 0
Escherichia coli strain K-12 substr. HMS174 Genomic island TA285406, TA285407 NZ_LM993812 2708540..2740619 0.001