MGE detailed information

MGE type: Genomic_island        MGE length: 11293 bp
Accession: NC_003197        Location: 3186004..3197296         Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2       Replicon: chromosome

Gene structure

Location: 3181905..3182387 (483 bp)
Type: Others
Protein ID: NP_461938.1

Location: 3182529..3183758 (1230 bp)
Type: Others
Protein ID: NP_461939.1

Location: 3184183..3185049 (867 bp)
Type: Others
Protein ID: NP_461941.1

Location: 3195964..3196215 (252 bp)
Type: Others
Protein ID: NP_449411.1

Location: 3196490..3197296 (807 bp)
Type: Others
Protein ID: NP_461953.1

Location: 3198604..3199149 (546 bp)
Type: Others
Protein ID: NP_461955.1

Location: 3183789..3184061 (273 bp)
Type: Others
Protein ID: NP_461940.1

Location: 3185259..3186017 (759 bp)
Type: Others
Protein ID: NP_461942.1

Location: 3186660..3187736 (1077 bp)
Type: Others
Protein ID: NP_461943.1

Location: 3187733..3188476 (744 bp)
Type: VF
Protein ID: NP_461944.1

Location: 3188517..3191006 (2490 bp)
Type: VF
Protein ID: NP_461945.1

Location: 3191126..3191836 (711 bp)
Type: VF
Protein ID: NP_461946.3

Location: 3192429..3193061 (633 bp)
Type: Others
Protein ID: NP_461947.1

Location: 3193108..3193644 (537 bp)
Type: VF
Protein ID: NP_461948.1

Location: 3194324..3194782 (459 bp)
Type: Transposase
Protein ID: NP_461949.1

Location: 3195162..3195560 (399 bp)
Type: Toxin
Protein ID: NP_461950.1

Location: 3195560..3195787 (228 bp)
Type: Antitoxin
Protein ID: NP_461951.1

Location: 3197581..3198339 (759 bp)
Type: Others
Protein ID: NP_461954.1

Location: 3199225..3200742 (1518 bp)
Type: Others
Protein ID: NP_461956.1

Location: 3200752..3201633 (882 bp)
Type: Others
Protein ID: NP_461957.3

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Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
STM3021	3181905..3182387	+	483	NP_461938.1	putative inner membrane protein	-
STM3022	3182529..3183758	+	1230	NP_461939.1	putative transport protein	-
STM3023	3183789..3184061	-	273	NP_461940.1	putative cytoplasmic protein	-
STM3024	3184183..3185049	+	867	NP_461941.1	putative inner membrane protein	-
STM3025	3185259..3186017	-	759	NP_461942.1	putative cytoplasmic protein	-
STM3026	3186660..3187736	-	1077	NP_461943.1	putative outer membrane protein	-
STM3027	3187733..3188476	-	744	NP_461944.1	Chaperone protein PapD	VF
STM3028	3188517..3191006	-	2490	NP_461945.1	Outer membrane usher protein PapC	VF
STM3029	3191126..3191836	-	711	NP_461946.3	putative fimbrial-like protein YbgD	VF
STM3030	3192429..3193061	-	633	NP_461947.1	putative periplasmic protein	-
STM3031	3193108..3193644	-	537	NP_461948.1	Attachment invasion locus protein	VF
STM3032	3194324..3194782	-	459	NP_461949.1	IS200-IS605 family transposase IS200F	Transposase
STM3033	3195162..3195560	-	399	NP_461950.1	putative nucleic acid-binding protein	Toxin Detail
STM3034	3195560..3195787	-	228	NP_461951.1	putative cytoplasmic protein	Antitoxin Detail
STM3035	3195964..3196215	+	252	NP_449411.1	putative periplasmic protein	-
STM3036	3196490..3197296	+	807	NP_461953.1	putative inner membrane protein	-
STM3038	3197581..3198339	-	759	NP_461954.1	putative metalloendopeptidase	-
STM3039	3198604..3199149	+	546	NP_461955.1	isopentenyldiphosphate isomerase	-
STM3040	3199225..3200742	-	1518	NP_461956.1	constitutive lysine tRNA synthetase	-
STM3041	3200752..3201633	-	882	NP_461957.3	peptide chain release factor RF-2	-

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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail	Organism	MGE type	Related TA	Genome accession	Coordinates	Mash distance
	Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023	Genomic island	TA297244	UFRD01000002	4451871..4463194	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S	Genomic island	TA26056	NC_016856	3205849..3216429	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344	Genomic island	TA25956	NC_016810	3207430..3218010	0.002
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835	Genomic island	TA37173	NZ_AP023288	897307..908632	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837	Genomic island	TA37197	NZ_AP023289	960525..971850	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3844	Genomic island	TA37221	NZ_AP023290	879784..891109	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain L-4126	Genomic island	TA37245	NZ_AP023291	847804..859129	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233	Genomic island	TA37269	NZ_AP023292	847808..859133	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261	Genomic island	TA37293	NZ_AP023294	847806..859131	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334	Genomic island	TA37318	NZ_AP023299	847808..859133	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4445	Genomic island	TA37342	NZ_AP023300	847808..859133	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4526	Genomic island	TA37371	NZ_AP023303	879784..891109	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4551	Genomic island	TA37394	NZ_AP023304	881121..892446	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4567	Genomic island	TA37419	NZ_AP023306	847808..859133	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578	Genomic island	TA37452	NZ_AP023309	847774..859099	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4596	Genomic island	TA37477	NZ_AP023311	847808..857732	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605	Genomic island	TA37501	NZ_AP023313	847804..859129	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4614	Genomic island	TA37530	NZ_AP023315	847782..859107	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4681	Genomic island	TA37555	NZ_AP023317	880558..891883	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4741	Genomic island	TA37580	NZ_AP023319	847808..859133	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216	Genomic island	TA146346	NZ_CP047522	4050921..4061501	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11077	Genomic island	TA146361	NZ_CP047525	879809..891134	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10648	Genomic island	TA146401	NZ_CP047527	4108832..4119412	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10640	Genomic island	TA146426	NZ_CP047529	4088003..4098583	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484	Genomic island	TA146436	NZ_CP047531	879484..890809	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10452	Genomic island	TA146461	NZ_CP047535	679513..690838	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10405	Genomic island	TA146501	NZ_CP047537	4026907..4037487	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10330	Genomic island	TA146556	NZ_CP047542	4108745..4119325	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250	Genomic island	TA146566	NZ_CP047544	879650..890975	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236	Genomic island	TA146591	NZ_CP047546	879605..890930	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10169	Genomic island	TA146631	NZ_CP047548	4099471..4110051	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10112	Genomic island	TA146688	NZ_CP047555	277854..288434	0.002
	Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376	Genomic island	TA181072	NZ_CP064385	1931625..1942917	0
	Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625	Genomic island	TA185725	NZ_CP067091	3124048..3135340	0
	Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000	Genomic island	TA186254	NZ_CP067397	3124780..3136072	0
	Salmonella enterica strain 1722	Genomic island	TA186450	NZ_CP068018	3853717..3864297	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345	Genomic island	TA187603	NZ_CP068696	1319973..1331298	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain SO_8752_Stm	Genomic island	TA201377	NZ_CP074092	3186004..3197296	0
	Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081	Genomic island	TA202568	NZ_CP074663	848777..860102	0.004
	Salmonella enterica strain CFSAN033950	Genomic island	TA203274	NZ_CP075141	841426..852751	0.004
	Salmonella enterica strain no75	Genomic island	TA203513	NZ_CP075372	929744..941069	0.004
	Salmonella enterica strain SP	Genomic island	TA207381	NZ_CP077668	880832..892157	0.004
	Salmonella enterica strain sg1722-1	Genomic island	TA212649	NZ_CP081187	879487..890812	0.004
	Salmonella enterica strain sg1722-2	Genomic island	TA212673	NZ_CP081189	879687..891012	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise	Genomic island	TA221969	NZ_CP085819	2743062..2754391	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain Wartortle	Genomic island	TA221981	NZ_CP085820	843865..854445	0.002
	Salmonella enterica strain SZL 38	Genomic island	TA222427	NZ_CP085987	4325888..4336468	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain S34	Genomic island	TA222550	NZ_CP086118	879684..891009	0.004
	Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549	Genomic island	TA226792	NZ_CP088138	879535..890860	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY	Genomic island	TA230386	NZ_CP090304	3186004..3197296	0
	Salmonella enterica strain 2008079-SE	Genomic island	TA231017	NZ_CP090529	879493..890818	0.004
	Salmonella enterica strain 2017005-SE	Genomic island	TA231059	NZ_CP090533	3851334..3861914	0.002
	Salmonella enterica strain 2016089-SE	Genomic island	TA231071	NZ_CP090535	1038411..1048991	0.002
	Salmonella enterica strain 2016062-SE	Genomic island	TA231097	NZ_CP090539	960309..971634	0.004
	Salmonella enterica strain 2010112-SE	Genomic island	TA231122	NZ_CP090541	847708..859033	0.004
	Salmonella enterica strain 2017028-SE	Genomic island	TA231147	NZ_CP090545	960225..971550	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain S46L1	Genomic island	TA233573	NZ_CP091540	847454..858779	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain S58L2	Genomic island	TA233600	NZ_CP091542	847699..859024	0.004
	Salmonella enterica strain 1618	Genomic island	TA233627	NZ_CP091544	962756..974081	0.004
	Salmonella enterica strain 1559	Genomic island	TA233665	NZ_CP091547	3852931..3863511	0.002
	Salmonella enterica strain 751	Genomic island	TA233690	NZ_CP091554	3774110..3784690	0.002
	Salmonella enterica strain 632	Genomic island	TA233702	NZ_CP091556	882784..894109	0.004
	Salmonella enterica strain 418	Genomic island	TA233740	NZ_CP091558	3720355..3731680	0.004
	Salmonella enterica strain 179	Genomic island	TA233752	NZ_CP091560	877974..889299	0.004
	Salmonella enterica strain 143	Genomic island	TA233790	NZ_CP091563	3854735..3865315	0.002
	Salmonella enterica strain 137	Genomic island	TA233805	NZ_CP091566	269097..280422	0.004
	Salmonella enterica strain 131	Genomic island	TA233834	NZ_CP091569	880756..892081	0.004
	Salmonella enterica strain	Genomic island	TA233859	NZ_CP091571	879684..890628	0.003
	Salmonella enterica strain P048595	Genomic island	TA238352	NZ_CP093386	848654..859979	0.004
	Salmonella enterica subsp. enterica strain 3018683606	Genomic island	TA239672	NZ_CP094332	847706..859031	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6	Genomic island	TA247620	NZ_CP098438	889478..901515	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222	Genomic island	TA247950	NZ_CP098741	1399689..1410981	0
	Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1	Genomic island	TA248150	NZ_CP098834	880107..891432	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain 013+	Genomic island	TA249292	NZ_CP099705	878077..889402	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867	Genomic island	TA251037	NZ_CP100691	927343..938668	0.003
	Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409	Genomic island	TA251132	NZ_CP100707	879723..891048	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474	Genomic island	TA251177	NZ_CP100715	847708..859033	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932	Genomic island	TA251261	NZ_CP100732	847680..859005	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292	Genomic island	TA251305	NZ_CP100739	847680..859005	0.004
	Salmonella enterica strain SC2016042	Genomic island	TA251970	NZ_CP101373	928446..939771	0.004
	Salmonella enterica strain SC2016090	Genomic island	TA251994	NZ_CP101375	1532769..1544094	0.004
	Salmonella enterica strain SC2016091	Genomic island	TA252011	NZ_CP101376	879681..891006	0.004
	Salmonella enterica strain SC2016290	Genomic island	TA252034	NZ_CP101379	879681..891006	0.004
	Salmonella enterica strain SC2017030	Genomic island	TA252057	NZ_CP101382	928446..939771	0.004
	Salmonella enterica strain SC2017100	Genomic island	TA252077	NZ_CP101386	960422..971747	0.004
	Salmonella enterica strain SC2017167	Genomic island	TA252097	NZ_CP101388	880392..891717	0.004
	Salmonella enterica strain SC2017297	Genomic island	TA252117	NZ_CP101390	960414..971739	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028	Genomic island	TA253911	NZ_CP102669	842290..853615	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809	Genomic island	TA257778	NZ_CP104366	847361..858686	0.004
	Salmonella enterica strain SalSpp_sample_07_No.3	Genomic island	TA258077	NZ_CP104484	879568..890893	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-75	Genomic island	TA263393	NZ_CP110198	879352..890677	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65	Genomic island	TA263414	NZ_CP110201	879552..890877	0.004
	Salmonella enterica subsp. enterica strain S2122	Genomic island	TA264086	NZ_CP110657	1225282..1235862	0.002
	Salmonella enterica strain ZLQ	Genomic island	TA265901	NZ_CP113535	960425..971750	0.004
	Salmonella enterica strain ZCX	Genomic island	TA265920	NZ_CP113536	881343..892668	0.004
	Salmonella enterica strain XSK	Genomic island	TA265954	NZ_CP113538	877461..888786	0.004
	Salmonella enterica strain CHC	Genomic island	TA266010	NZ_CP113541	877577..888902	0.004
	Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708	Genomic island	TA267680	NZ_CP116042	879453..890778	0.004
	Salmonella enterica strain PIW95_S14_0299	Genomic island	TA269883	NZ_CP117033	879368..890693	0.004
	Salmonella enterica subsp. enterica strain 123	Genomic island	TA270051	NZ_CP117184	3853418..3863998	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028	Genomic island	TA270171	NZ_CP117244	842290..853615	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain RM095	Genomic island	TA270610	NZ_CP117338	847688..859013	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain RM096	Genomic island	TA270766	NZ_CP117357	877581..888906	0.004
	Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054	Genomic island	TA270871	NZ_CP117370	879676..891001	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain RM015	Genomic island	TA271141	NZ_CP117398	848949..860986	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain RM014	Genomic island	TA271161	NZ_CP117400	848949..860986	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain RM085	Genomic island	TA271194	NZ_CP117404	849165..861202	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain 013	Genomic island	TA276142	NZ_CP121262	848171..859496	0.004
	Salmonella enterica subsp. enterica strain KKP 3080	Genomic island	TA276255	NZ_CP121298	1194451..1204695	0.006
	Salmonella enterica subsp. enterica serovar Kottbus strain DSK01	Genomic island	TA282656	NZ_CP126138	848170..859495	0.004
	Salmonella enterica subsp. enterica strain HL21	Genomic island	TA282768	NZ_CP126325	879262..892507	0.009
	Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00004549 isolate AUSMDU00004549	Genomic island	TA294627	NZ_OU015323	4133482..4144807	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944	Genomic island	TA294648	NZ_OU015340	4131305..4142630	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00007171 isolate AUSMDU00007171	Genomic island	TA294658	NZ_OU015342	879552..890877	0.004
	Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344	Genomic island	TA25956	NC_016810	3207430..3218010	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S	Genomic island	TA26056	NC_016856	3205849..3216429	0.002
	Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023	Genomic island	TA297244	UFRD01000002	4451871..4463194	0.004