MGE detailed information
MGE type: Prophage MGE length: 30655 bp
Accession: NC_016856 Location: 1954607..1985261 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Replicon:
Accession: NC_016856 Location: 1954607..1985261 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Replicon:
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STM14_RS10110 (STM14_2230) | 1950043..1951416 | + | 1374 | WP_000416128.1 | MFS transporter | - |
| STM14_RS10115 (STM14_2231) | 1951464..1952345 | - | 882 | WP_000984498.1 | protease HtpX | - |
| STM14_RS10120 (STM14_2232) | 1952539..1954587 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| STM14_RS10125 (STM14_2233) | 1954607..1955293 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| STM14_RS10130 (STM14_2234) | 1955391..1955888 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| STM14_RS10135 (STM14_2235) | 1956017..1957300 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| STM14_RS10140 (STM14_2236) | 1957269..1959902 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| STM14_RS10145 (STM14_2237) | 1959980..1961419 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| STM14_RS10150 (STM14_2239) | 1961537..1961773 | + | 237 | WP_024131108.1 | YebV family protein | - |
| STM14_RS10155 (STM14_2240) | 1961884..1962075 | + | 192 | WP_000457836.1 | YebW family protein | - |
| STM14_RS10160 (STM14_2241) | 1962094..1962744 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| STM14_RS10165 (STM14_2242) | 1962968..1963132 | - | 165 | WP_001134856.1 | membrane protein | - |
| STM14_RS10170 (STM14_2244) | 1963417..1964139 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| STM14_RS10175 (STM14_2247) | 1964823..1965218 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| STM14_RS10180 (STM14_2248) | 1965548..1966024 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| STM14_RS10185 (STM14_2249) | 1966412..1966831 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| STM14_RS26035 (STM14_2251) | 1967201..1967470 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| STM14_RS10195 (STM14_2252) | 1967636..1967776 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| STM14_RS10200 (STM14_2253) | 1967922..1969116 | - | 1195 | Protein_1890 | IS256 family transposase IS285 | Transposase |
| STM14_RS10205 (STM14_2254) | 1969186..1969608 | + | 423 | Protein_1891 | hypothetical protein ; Integrase | Integrase |
| STM14_RS10210 (STM14_2256) | 1970912..1971826 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| STM14_RS10215 (STM14_2257) | 1971959..1972117 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| STM14_RS10220 (STM14_2258) | 1972127..1972741 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| STM14_RS26765 (STM14_2259) | 1973068..1973235 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| STM14_RS26930 (STM14_2261) | 1973229..1973375 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| STM14_RS24910 | 1973889..1974014 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| STM14_RS26770 | 1974014..1974194 | + | 181 | Protein_1898 | IS3 family transposase | - |
| STM14_RS10225 (STM14_2265) | 1974584..1974784 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| STM14_RS26775 | 1974881..1975351 | - | 471 | Protein_1900 | tail fiber assembly protein | - |
| STM14_RS26780 | 1975361..1975705 | - | 345 | Protein_1901 | macro domain-containing protein | - |
| STM14_RS10235 (STM14_2267) | 1975920..1976180 | - | 261 | Protein_1902 | DUF1441 family protein | - |
| STM14_RS10240 (STM14_2268) | 1976235..1976423 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| STM14_RS10245 (STM14_2269) | 1976488..1976655 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| STM14_RS10250 (STM14_2272) | 1976912..1977445 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| STM14_RS10255 (STM14_2273) | 1977499..1977690 | - | 192 | Protein_1906 | glycoside hydrolase family 19 protein | - |
| STM14_RS26785 | 1977679..1978140 | + | 462 | Protein_1907 | DNA breaking-rejoining protein | - |
| STM14_RS26045 (STM14_2275) | 1978404..1979327 | + | 924 | Protein_1908 | hypothetical protein ; Integrase | Integrase |
| - | 1979456..1979601 | + | 146 | - | - | Antitoxin Detail |
| - | 1979458..1979561 | - | 104 | - | - | Toxin Detail |
| STM14_RS10275 (STM14_2278) | 1979701..1980054 | - | 354 | WP_000722368.1 | YebY family protein | - |
| STM14_RS10280 (STM14_2279) | 1980071..1980946 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| STM14_RS10285 (STM14_2280) | 1980947..1981321 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| STM14_RS10290 (STM14_2281) | 1981459..1981689 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| STM14_RS10295 (STM14_2282) | 1981797..1982453 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| STM14_RS10300 (STM14_2283) | 1982477..1983175 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| STM14_RS10305 (STM14_2284) | 1983210..1985261 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| STM14_RS10310 (STM14_2285) | 1985474..1986133 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| STM14_RS10315 (STM14_2286) | 1986227..1986580 | - | 354 | WP_001042119.1 | protein YebF | - |
| STM14_RS10320 (STM14_2287) | 1986648..1986938 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| STM14_RS10325 (STM14_2288) | 1987069..1988247 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| STM14_RS10330 (STM14_2289) | 1988347..1988988 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 | Prophage | TA26076 | NC_016863 | 1895143..1935129 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Heidelberg str. | Prophage | TA29796 | NC_021812 | 2424901..2455569 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Thompson str. RM6836 | Prophage | TA30141 | NC_022525 | 1910508..1938889 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 | Prophage | TA30165 | NC_022544 | 1885289..1923607 | 0.005 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835 | Prophage | TA37175 | NZ_AP023288 | 2135223..2173540 | 0.005 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837 | Prophage | TA37199 | NZ_AP023289 | 2201777..2241771 | 0.007 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3844 | Prophage | TA37223 | NZ_AP023290 | 2096593..2136587 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain L-4126 | Prophage | TA37247 | NZ_AP023291 | 2108556..2136556 | 0.003 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233 | Prophage | TA37271 | NZ_AP023292 | 2082074..2120390 | 0.005 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261 | Prophage | TA37295 | NZ_AP023294 | 2081358..2119674 | 0.005 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334 | Prophage | TA37320 | NZ_AP023299 | 2080618..2104665 | 0.008 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 | Prophage | TA37454 | NZ_AP023309 | 2054059..2092375 | 0.005 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4596 | Prophage | TA37479 | NZ_AP023311 | 2084392..2105691 | 0.009 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605 | Prophage | TA37503 | NZ_AP023313 | 2073537..2111853 | 0.005 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4614 | Prophage | TA37532 | NZ_AP023315 | 2081441..2119757 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 | Prophage | TA146337 | NZ_CP047522 | 2819709..2859703 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 | Prophage | TA146438 | NZ_CP047531 | 2126538..2166532 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 | Prophage | TA146593 | NZ_CP047546 | 2132270..2153569 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10057 | Prophage | TA146643 | NZ_CP047550 | 2140221..2168797 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10112 | Prophage | TA146703 | NZ_CP047555 | 3988931..4028925 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 | Prophage | TA185716 | NZ_CP067091 | 1935468..1971691 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 | Prophage | TA186245 | NZ_CP067397 | 1936204..1974513 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 | Prophage | TA187605 | NZ_CP068696 | 2576270..2616256 | 0.007 | |
| Salmonella enterica strain GSJ/2016-Sal-016 | Prophage | TA190273 | NZ_CP069381 | 1995955..2034279 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain SO_8752_Stm | Prophage | TA201368 | NZ_CP074092 | 1935544..1973853 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Stanleyville strain CFSAN059881 | Prophage | TA202976 | NZ_CP075116 | 1986011..2024534 | 0.009 | |
| Salmonella enterica strain sg1722-2 | Prophage | TA212675 | NZ_CP081189 | 2057993..2085993 | 0.003 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain S29 | Prophage | TA221092 | NZ_CP085699 | 2124284..2149136 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise | Prophage | TA221971 | NZ_CP085819 | 4011205..4049513 | 0.005 | |
| Salmonella enterica strain SZL 30 | Prophage | TA222357 | NZ_CP085981 | 1234487..1265143 | 0.009 | |
| Salmonella enterica strain SZL 38 | Prophage | TA222405 | NZ_CP085987 | 416871..455188 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain S34 | Prophage | TA222552 | NZ_CP086118 | 2107109..2145426 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 | Prophage | TA226794 | NZ_CP088138 | 2112541..2150850 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY | Prophage | TA230377 | NZ_CP090304 | 1935544..1973853 | 0.005 | |
| Salmonella enterica strain 2017005-SE | Prophage | TA231050 | NZ_CP090533 | 2609961..2637961 | 0.003 | |
| Salmonella enterica strain 2016062-SE | Prophage | TA231099 | NZ_CP090539 | 2185771..2225765 | 0.007 | |
| Salmonella enterica strain 2010112-SE | Prophage | TA231124 | NZ_CP090541 | 2104240..2142557 | 0.005 | |
| Salmonella enterica strain 2017028-SE | Prophage | TA231149 | NZ_CP090545 | 2183982..2222299 | 0.005 | |
| Salmonella enterica strain 1559 | Prophage | TA233656 | NZ_CP091547 | 2610379..2638379 | 0.003 | |
| Salmonella enterica strain P048595 | Prophage | TA238354 | NZ_CP093386 | 2111834..2137217 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1 | Prophage | TA248152 | NZ_CP098834 | 2101036..2126427 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ | Prophage | TA249294 | NZ_CP099705 | 2097713..2136022 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R17.3867 | Prophage | TA251039 | NZ_CP100691 | 2195289..2234936 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 | Prophage | TA251134 | NZ_CP100707 | 2086618..2124935 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 | Prophage | TA251179 | NZ_CP100715 | 2076742..2108723 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 | Prophage | TA251179 | NZ_CP100715 | 2078061..2103452 | 0.005 | |
| Salmonella enterica strain SC2016025 | Prophage | TA251953 | NZ_CP101372 | 2446527..2484844 | 0.006 | |
| Salmonella enterica strain SC2016042 | Prophage | TA251972 | NZ_CP101373 | 2155588..2193904 | 0.006 | |
| Salmonella enterica strain SC2016091 | Prophage | TA252013 | NZ_CP101376 | 2122697..2161014 | 0.006 | |
| Salmonella enterica strain SC2016290 | Prophage | TA252036 | NZ_CP101379 | 2115963..2156321 | 0.009 | |
| Salmonella enterica strain SC2016290 | Prophage | TA252036 | NZ_CP101379 | 2117640..2143395 | 0.007 | |
| Salmonella enterica strain SC2017030 | Prophage | TA252059 | NZ_CP101382 | 2161557..2186948 | 0.005 | |
| Salmonella enterica strain SC2017100 | Prophage | TA252079 | NZ_CP101386 | 2173863..2212180 | 0.006 | |
| Salmonella enterica strain SC2017167 | Prophage | TA252099 | NZ_CP101388 | 2124791..2163108 | 0.006 | |
| Salmonella enterica subsp. enterica strain QA-1986 973 | Prophage | TA252861 | NZ_CP101907 | 284727..323027 | 0.005 | |
| Salmonella enterica subsp. enterica strain QA-1986 974 | Prophage | TA253038 | NZ_CP101940 | 284727..323027 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 | Prophage | TA253913 | NZ_CP102669 | 2164367..2202676 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 | Prophage | TA257780 | NZ_CP104366 | 2078173..2103556 | 0.005 | |
| Salmonella enterica strain SalSpp_sample_07_No.3 | Prophage | TA258079 | NZ_CP104484 | 2095004..2133321 | 0.006 | |
| Salmonella enterica strain ZLQ | Prophage | TA265903 | NZ_CP113535 | 2138118..2163509 | 0.005 | |
| Salmonella enterica strain XSK | Prophage | TA265956 | NZ_CP113538 | 2038043..2063425 | 0.005 | |
| Salmonella enterica strain CHC | Prophage | TA266012 | NZ_CP113541 | 2038169..2063551 | 0.005 | |
| Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain BL708 | Prophage | TA267682 | NZ_CP116042 | 2122355..2160673 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 | Prophage | TA270173 | NZ_CP117244 | 2073445..2111754 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 | Prophage | TA270527 | NZ_CP117327 | 1983271..2021595 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 | Prophage | TA270699 | NZ_CP117348 | 2053842..2092165 | 0.009 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 | Prophage | TA270873 | NZ_CP117370 | 2121062..2161056 | 0.007 | |
| Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 | Prophage | TA270873 | NZ_CP117370 | 2122739..2161056 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM015 | Prophage | TA271143 | NZ_CP117398 | 2128394..2153777 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 | Prophage | TA271163 | NZ_CP117400 | 2127075..2159048 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM014 | Prophage | TA271163 | NZ_CP117400 | 2128394..2153777 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 | Prophage | TA271196 | NZ_CP117404 | 2075140..2113447 | 0.005 | |
| Salmonella enterica strain SC2020597 | Prophage | TA275342 | NZ_CP120671 | 4479751..4506915 | 0.01 | |
| Salmonella enterica subsp. enterica serovar Infantis strain R21.1575 | Prophage | TA275561 | NZ_CP121068 | 2624875..2655531 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain 013 | Prophage | TA276144 | NZ_CP121262 | 2067806..2106115 | 0.005 | |
| Salmonella enterica subsp. enterica strain KKP 3080 | Prophage | TA276257 | NZ_CP121298 | 2348558..2373940 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Kottbus strain DSK01 | Prophage | TA282658 | NZ_CP126138 | 2101875..2127257 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B | Prophage | TA284496 | NZ_CP128261 | 2003650..2041973 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00007171 isolate AUSMDU00007171 | Prophage | TA294660 | NZ_OU015342 | 2121672..2147063 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.006 |