NZ_CP025520269442..291116

MGE detailed information

MGE type: Prophage        MGE length: 21675 bp
Accession: NZ_CP025520        Location: 269442..291116         Organism: Escherichia coli strain DH5alpha       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CDN75_RS24345 265431..265478 + 48 WP_211180494.1 protein YnaN -
CDN75_RS01550 265492..266475 + 984 WP_000387388.1 zinc transporter ZntB -
CDN75_RS01560 266953..268326 + 1374 WP_000123737.1 ATP-dependent RNA helicase DbpA -
CDN75_RS01565 268455..269390 - 936 WP_001157406.1 tRNA 2-thiocytidine(32) synthetase TtcA -
CDN75_RS01570 269442..270677 - 1236 WP_000040852.1 Putative defective protein IntQ ; Integrase Integrase
CDN75_RS01575 270679..270894 - 216 WP_000079604.1 excisionase XisR -
CDN75_RS01580 270973..271182 - 210 WP_000276809.1 double-strand break reduction protein RcbA -
- 270998..271176 + 179 - - Antitoxin Detail
CDN75_RS01585 271175..271369 - 195 WP_001317028.1 type I toxin-antitoxin system endodeoxyribonuclease toxin RalR Toxin Detail
CDN75_RS01590 271426..272235 - 810 WP_000166319.1 recombination protein RecT -
CDN75_RS01595 272228..274828 - 2601 WP_000105143.1 exodeoxyribonuclease VIII -
CDN75_RS01600 274930..275205 - 276 WP_000632297.1 protein RacC -
CDN75_RS01605 275280..275450 - 171 WP_001352098.1 conserved protein, Rac prophage -
CDN75_RS01610 275450..275671 - 222 WP_000560225.1 killing protein KilR -
CDN75_RS01620 276113..276601 + 489 WP_046613436.1 superinfection exclusion B family protein -
CDN75_RS01625 276598..276753 - 156 WP_001169151.1 YdaF family protein -
CDN75_RS01635 277207..277683 - 477 WP_000948459.1 DNA-binding transcriptional repressor RacR -
CDN75_RS01640 277807..278103 + 297 WP_000712069.1 toxin YdaS -
CDN75_RS01645 278126..278548 + 423 WP_000693797.1 phage protein -
CDN75_RS01650 278561..279418 + 858 WP_000899748.1 DUF1376 domain-containing protein -
CDN75_RS01655 279425..280171 + 747 WP_000788970.1 ATP-binding protein -
CDN75_RS01660 280194..280646 + 453 Protein_306 DUF1627 domain-containing protein -
CDN75_RS01665 280842..281027 + 186 WP_001228696.1 prophage lysis lipoprotein RzoD -
CDN75_RS01670 281224..282681 + 1458 WP_001097895.1 Trk system potassium transporter TrkG -
CDN75_RS01680 282819..283082 + 264 WP_001350510.1 ParB/Srx family N-terminal domain-containing protein -
CDN75_RS01685 283063..283422 + 360 WP_000091628.1 hypothetical protein -
CDN75_RS01695 283896..284828 + 933 Protein_311 phage tail length tape measure family protein -
CDN75_RS01700 284831..285046 + 216 Protein_312 Ail/Lom family outer membrane beta-barrel protein -
CDN75_RS01710 285188..286168 - 981 WP_046613426.1 IS5 family transposase ISKpn26 Transposase
CDN75_RS01715 286238..286426 + 189 Protein_314 Ail/Lom family outer membrane beta-barrel protein -
CDN75_RS01720 286491..289853 + 3363 WP_071885698.1 prophage tail fiber N-terminal domain-containing protein -
CDN75_RS01725 289853..290428 + 576 WP_001698950.1 tail fiber assembly protein -
CDN75_RS01730 290526..291116 - 591 WP_000086527.1 Tn3 family transposase TnpR_ISSba14 Transposase
CDN75_RS01735 291433..291666 - 234 WP_000836770.1 cold shock protein YdfK -
CDN75_RS24015 291735..291848 - 114 WP_120795384.1 hypothetical protein -
CDN75_RS01740 292627..293061 - 435 WP_001300461.1 universal stress protein UspF -
CDN75_RS01745 293202..294335 - 1134 WP_000837921.1 porin OmpN -

Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20020 CP009789 1385172..1414104 0.008
Escherichia coli str. K-12 substr. MC4100 Prophage TA20061 HG738867 1300529..1322203 0
Escherichia coli str. K-12 substr. MG1655 Prophage TA6362 NC_000913 1412000..1433674 0
Escherichia coli str. K-12 substr. W3110 Prophage TA21432 NC_007779 1413714..1435388 0
Escherichia coli str. K-12 substr. DH10B Prophage TA22680 NC_010473 1499420..1521094 0
Escherichia coli BW2952 Prophage TA23848 NC_012759 1302083..1323757 0
Escherichia coli DH1 Prophage TA27398 NC_017638 1394182..1415856 0
Escherichia coli BW25113 Prophage TA48677 NZ_CP009273 1406257..1427931 0
Escherichia coli str. K-12 substr. MG1655 Prophage TA6362 NC_000913 1412000..1433674 0
Escherichia coli BW2952 Prophage TA23848 NC_012759 1302083..1323757 0
Escherichia coli DH1 Prophage TA27398 NC_017638 1394182..1415856 0
Escherichia coli BW25113 Prophage TA48677 NZ_CP009273 1406257..1427931 0
Escherichia coli str. K-12 substr. MC4100 Prophage TA20061 HG738867 1300529..1322203 0
Escherichia coli str. K-12 substr. DH10B Prophage TA22680 NC_010473 1499420..1521094 0
Escherichia coli str. K-12 substr. W3110 Prophage TA21432 NC_007779 1413714..1435388 0
Escherichia coli K-12 strain ER3413 Prophage TA20020 CP009789 1385172..1414104 0.008
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285012 NZ_HG738867 1300529..1322203 0
Escherichia coli KLY Prophage TA47497 NZ_CP008801 1387282..1408956 0
Escherichia coli ER2796 strain K-12 ER2796 Prophage TA49358 NZ_CP009644 1385171..1414103 0.008
Escherichia coli K-12 strain K-12 ER3413 Prophage TA49785 NZ_CP009789 1385172..1414104 0.008
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52430 NZ_CP010438 2167667..2189340 0
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52463 NZ_CP010439 2145223..2174155 0.008
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52502 NZ_CP010440 2169121..2190794 0
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52542 NZ_CP010441 2155573..2177246 0
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52584 NZ_CP010442 2208369..2230043 0
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52666 NZ_CP010444 2157567..2179241 0
Escherichia coli K-12 strain K-12 MG1655 Prophage TA52708 NZ_CP010445 2208368..2230042 0
Escherichia coli strain SQ37 Prophage TA53838 NZ_CP011320 1410025..1431699 0
Escherichia coli strain SQ88 Prophage TA53881 NZ_CP011321 1404487..1426161 0
Escherichia coli strain SQ110 Prophage TA53924 NZ_CP011322 1404486..1426160 0
Escherichia coli strain SQ2203 Prophage TA53967 NZ_CP011324 1404487..1426161 0
Escherichia coli K-12 substr. GM4792 Prophage TA54054 NZ_CP011342 1393868..1415542 0
Escherichia coli K-12 substr. GM4792 Prophage TA54093 NZ_CP011343 1385669..1414602 0.008
Escherichia coli strain NCM3722 isolate K-12 Prophage TA54319 NZ_CP011495 2664138..2685812 0
Escherichia coli strain DH1Ec095 Prophage TA55834 NZ_CP012125 1394183..1415857 0
Escherichia coli strain DH1Ec104 Prophage TA55877 NZ_CP012126 1394184..1415858 0
Escherichia coli strain DH1Ec169 Prophage TA55920 NZ_CP012127 1391928..1413602 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA60408 NZ_CP014225 4250924..4272598 0
Escherichia coli K-12 strain K-12 DHB4 Prophage TA60521 NZ_CP014270 1317105..1338779 0
Escherichia coli K-12 strain K-12 C3026 Prophage TA60573 NZ_CP014272 1515182..1537843 0.001
Escherichia coli strain K-12 NEB 5-alpha Prophage TA65972 NZ_CP017100 1357884..1379558 0
Escherichia coli strain MGY Prophage TA73070 NZ_CP019629 1412000..1433674 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA89990 NZ_CP025268 1416819..1438493 0.001
Escherichia coli strain CAR Prophage TA92756 NZ_CP026026 1410024..1431698 0
Escherichia coli strain LIM Prophage TA92797 NZ_CP026027 1410025..1431699 0
Escherichia coli strain CIT Prophage TA92840 NZ_CP026028 1410024..1431698 0
Escherichia coli strain 9FA Prophage TA93855 NZ_CP026342 1412000..1433674 0
Escherichia coli strain 8FA Prophage TA93941 NZ_CP026344 1412000..1433674 0
Escherichia coli strain 8A Prophage TA93984 NZ_CP026345 1412000..1433674 0
Escherichia coli strain 7FA Prophage TA94027 NZ_CP026346 1412000..1433674 0
Escherichia coli strain 7A Prophage TA94070 NZ_CP026347 1412000..1433674 0
Escherichia coli strain 6FA Prophage TA94113 NZ_CP026348 1412000..1433674 0
Escherichia coli strain 6A Prophage TA94156 NZ_CP026349 1412000..1433674 0
Escherichia coli strain 5FA Prophage TA94199 NZ_CP026350 1412000..1433674 0
Escherichia coli strain 5A Prophage TA94242 NZ_CP026351 1412000..1433674 0
Escherichia coli strain 4FA Prophage TA94285 NZ_CP026352 1412000..1433674 0
Escherichia coli strain 3FA Prophage TA94371 NZ_CP026354 1412000..1433674 0
Escherichia coli strain 3A Prophage TA94414 NZ_CP026355 1412000..1433674 0
Escherichia coli strain 2FA Prophage TA94457 NZ_CP026356 1412000..1433674 0
Escherichia coli strain 2F_0 Prophage TA94500 NZ_CP026357 1412000..1433674 0
Escherichia coli strain 2A Prophage TA94543 NZ_CP026358 1412000..1433674 0
Escherichia coli strain 2_0 Prophage TA94586 NZ_CP026359 1412000..1433674 0
Escherichia coli strain 1FA Prophage TA94629 NZ_CP026360 1412000..1433674 0
Escherichia coli strain 1A Prophage TA94672 NZ_CP026361 1412000..1433674 0
Escherichia coli strain J53 Prophage TA102952 NZ_CP028702 1845328..1867002 0
Escherichia coli strain ME8067 Prophage TA102996 NZ_CP028703 2270208..2291882 0
Escherichia coli strain CJ236 Prophage TA105244 NZ_CP029238 1412000..1433674 0
Escherichia coli strain ER1709 Prophage TA107385 NZ_CP030240 3540935..3562607 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA112101 NZ_CP032679 1412005..1433679 0
Escherichia coli strain ATCC 98082 Prophage TA116308 NZ_CP034658 1378571..1400245 0
Escherichia coli BW25113 strain AM187 Prophage TA120207 NZ_CP037857 1405919..1427593 0
Escherichia coli strain BE104 Prophage TA126259 NZ_CP040643 1545964..1567638 0
Escherichia coli strain EK2009 Prophage TA126346 NZ_CP040663 1400917..1422591 0.002
Escherichia coli strain KR2009 Prophage TA126389 NZ_CP040664 1399878..1421551 0.002
Escherichia coli strain JME67 Prophage TA136085 NZ_CP042843 2121489..2143163 0
Escherichia coli strain JME65 Prophage TA136171 NZ_CP042845 2116376..2138050 0
Escherichia coli strain JME64 Prophage TA136214 NZ_CP042846 2111495..2133169 0
Escherichia coli O16:H48 strain PG20180171 Prophage TA137422 NZ_CP043185 140259..161933 0
Escherichia coli O16:H48 strain PG20180060 Prophage TA137666 NZ_CP043199 2443910..2465584 0
Escherichia coli strain ecMN1F Prophage TA140887 NZ_CP044410 2110299..2139231 0.008
Escherichia coli strain Dam/Dcm Prophage TA157059 NZ_CP053603 1396047..1417720 0
Escherichia coli strain NEB10-beta Prophage TA157096 NZ_CP053604 1502039..1523712 0
Escherichia coli strain NEB_Turbo Prophage TA157126 NZ_CP053605 1298363..1320037 0
Escherichia coli strain NEB5-alpha_F'Iq Prophage TA157171 NZ_CP053607 1358898..1380572 0
Escherichia coli strain SY3626C5 Prophage TA167997 NZ_CP058948 1845036..1866710 0
Escherichia coli strain SY3626C1 Prophage TA168125 NZ_CP059043 1845036..1866710 0
Escherichia coli strain MFDpir Prophage TA170774 NZ_CP060708 1396450..1418124 0
Escherichia coli strain AML001_ev03 Prophage TA173640 NZ_CP062239 1406257..1427931 0
Escherichia coli strain AML001_ev02 Prophage TA173683 NZ_CP062240 1406257..1427931 0
Escherichia coli strain AML001_ev01 Prophage TA173726 NZ_CP062241 1406257..1427931 0
Escherichia coli strain AML001_par Prophage TA173769 NZ_CP062242 1406257..1427931 0
Escherichia coli strain AML003_ev03 Prophage TA173812 NZ_CP062243 1406257..1427931 0
Escherichia coli strain AML003_ev02 Prophage TA173855 NZ_CP062244 1406257..1427931 0
Escherichia coli strain AML003_ev01 Prophage TA173898 NZ_CP062245 1406256..1427930 0
Escherichia coli strain AML003_par Prophage TA173941 NZ_CP062246 1406257..1427931 0
Escherichia coli strain AML002_ev03 Prophage TA173984 NZ_CP062247 1407460..1429134 0
Escherichia coli strain AML002_ev02 Prophage TA174027 NZ_CP062248 1406257..1427931 0
Escherichia coli strain AML002_ev01 Prophage TA174070 NZ_CP062249 1407456..1429130 0
Escherichia coli strain AML002_par Prophage TA174113 NZ_CP062250 1406257..1427931 0
Escherichia coli K-12 strain CETR3G40 Prophage TA181421 NZ_CP064678 1406257..1427931 0
Escherichia coli K-12 strain CETR2G40 Prophage TA181464 NZ_CP064679 1406257..1427931 0
Escherichia coli K-12 strain CETR1G40 Prophage TA181507 NZ_CP064680 1406257..1427931 0
Escherichia coli K-12 strain BZKR3G40 Prophage TA181550 NZ_CP064681 1406257..1427931 0
Escherichia coli K-12 strain BZKR2G40 Prophage TA181593 NZ_CP064682 1406257..1427931 0
Escherichia coli strain CY706 Prophage TA187052 NZ_CP068281 2654102..2675776 0
Escherichia coli BW25113 substr. CHXR1G20 Prophage TA189913 NZ_CP069132 1406253..1427927 0
Escherichia coli BW25113 substr. CHXR2G20 Prophage TA189956 NZ_CP069133 1406257..1427931 0
Escherichia coli strain XH1815 Prophage TA190289 NZ_CP069386 35060..63993 0.008
Escherichia coli strain K1508 Prophage TA197253 NZ_CP072054 1300529..1322203 0
Escherichia coli strain JM83 Prophage TA208751 NZ_CP077969 1329478..1351152 0
Escherichia coli strain RP437 Prophage TA216365 NZ_CP083410 1411998..1433672 0
Escherichia coli strain g94 Prophage TA219821 NZ_CP084893 1405619..1434552 0.008
Escherichia coli strain g74 Prophage TA219907 NZ_CP084895 1405619..1434552 0.008
Escherichia coli strain gb37 Prophage TA219993 NZ_CP084897 1405619..1434552 0.008
Escherichia coli strain gw25 Prophage TA220036 NZ_CP084898 1405619..1434552 0.008
Escherichia coli strain W3110-P Prophage TA220079 NZ_CP084899 1405619..1434552 0.008
Escherichia coli strain MG1655-377GD Prophage TA235505 NZ_CP092037 1293781..1315455 0
Escherichia coli strain S-P-C-029.01 Prophage TA236974 NZ_CP092702 1412000..1433674 0
Escherichia coli strain JB41 Prophage TA253501 NZ_CP102378 1415377..1444310 0.008
Escherichia coli strain BM28 lysU Prophage TA253536 NZ_CP102379 1284440..1306114 0
Escherichia coli strain BM28 Prophage TA253570 NZ_CP102380 1284440..1306114 0
Escherichia coli strain HE_100-10 Prophage TA262636 NZ_CP110014 1499409..1521083 0
Escherichia coli strain HE_150 Prophage TA262662 NZ_CP110015 1499412..1521085 0.001
Escherichia coli strain HE_100 Prophage TA262688 NZ_CP110016 1499413..1521087 0
Escherichia coli strain HE_50 Prophage TA262714 NZ_CP110017 1499412..1521086 0
Escherichia coli strain DH10B Prophage TA262740 NZ_CP110018 1499420..1521094 0
Escherichia coli strain CM5 Prophage TA266915 NZ_CP114892 629780..651454 0
Escherichia coli strain CM19 Prophage TA266964 NZ_CP114894 756051..784984 0.008
Escherichia coli strain CM56 Prophage TA266997 NZ_CP114895 2052081..2073755 0
Escherichia coli strain CM93 Prophage TA267016 NZ_CP114896 867311..888985 0
Escherichia coli strain HT-947 Prophage TA276642 NZ_CP122315 2816191..2845124 0.008
Escherichia coli strain HT-948 Prophage TA276717 NZ_CP122317 4549295..4570969 0
Escherichia coli strain BW25113 Prophage TA276772 NZ_CP122319 3847851..3869525 0
Escherichia coli strain TG1 Prophage TA284412 NZ_CP128218 1034367..1056041 0
Escherichia coli strain K-12 substr. RV308 Prophage TA285430 NZ_LM995446 1360897..1382571 0
Escherichia coli str. K-12 substr. MG1655 strain K-12 Prophage TA289509 NZ_LR881938 1396269..1417943 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285012 NZ_HG738867 1300529..1322203 0