MGE detailed information
MGE type: MGE length: 504 bp
Accession: NZ_CP037923 Location: 4168367..4168870 Organism: Shigella flexneri 5a str. M90T Replicon: chromosome
Accession: NZ_CP037923 Location: 4168367..4168870 Organism: Shigella flexneri 5a str. M90T Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKN05_RS21200 (EKN05_021210) | 4164016..4166633 | - | 2618 | Protein_4085 | UDP-forming cellulose synthase catalytic subunit | - |
| EKN05_RS21205 (EKN05_021215) | 4166630..4167382 | - | 753 | WP_000279498.1 | cellulose biosynthesis protein BcsQ | - |
| EKN05_RS21210 (EKN05_021220) | 4167394..4167582 | - | 189 | WP_001063318.1 | cellulose biosynthesis protein BcsR | - |
| EKN05_RS21215 (EKN05_021225) | 4167855..4168352 | + | 498 | Protein_4088 | BcsE family c-di-GMP-binding protein | - |
| EKN05_RS21225 (EKN05_021235) | 4169121..4170203 | + | 1083 | Protein_4090 | cellulose biosynthesis protein BcsE | - |
| EKN05_RS21230 (EKN05_021240) | 4170200..4170391 | + | 192 | WP_000988299.1 | cellulose biosynthesis protein BcsF | - |
| EKN05_RS21235 (EKN05_021245) | 4170388..4172067 | + | 1680 | WP_000191558.1 | cellulose biosynthesis protein BcsG | - |
| EKN05_RS21240 (EKN05_021250) | 4172154..4172261 | - | 108 | WP_001295224.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| EKN05_RS21250 (EKN05_021260) | 4172637..4172744 | - | 108 | WP_001295224.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| EKN05_RS21260 (EKN05_021270) | 4173120..4173227 | - | 108 | WP_000141634.1 | type I toxin-antitoxin system toxic polypeptide LdrD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 2a str. 301 | IS/Tn | TA20774 | NC_004337 | 18684..19187 | 0.009 | |
| Shigella flexneri 2a str. 301 | IS/Tn | NC_004337 | 3665176..3665679 | 0.007 | ||
| Shigella flexneri 5 str. 8401 | IS/Tn | TA21651 | NC_008258 | 1413700..1414203 | 0.007 | |
| Shigella flexneri 5 str. 8401 | IS/Tn | TA21643 | NC_008258 | 18750..19253 | 0.004 | |
| Shigella flexneri 2002017 | IS/Tn | TA26532 | NC_017328 | 396752..397255 | 0.004 | |
| Shigella flexneri 2003036 isolate Human | IS/Tn | TA44914 | NZ_CP004056 | 359753..360256 | 0.007 | |
| Shigella flexneri 2003036 isolate Human | IS/Tn | NZ_CP004056 | 3661272..3661775 | 0.007 | ||
| Shigella flexneri Shi06HN006 isolate Human | IS/Tn | NZ_CP004057 | 3686310..3686813 | 0.007 | ||
| Shigella flexneri Shi06HN006 isolate Human | IS/Tn | TA44935 | NZ_CP004057 | 378368..378871 | 0.004 | |
| Shigella flexneri G1663 | IS/Tn | TA45971 | NZ_CP007037 | 370177..370680 | 0.009 | |
| Shigella flexneri 2a strain 981 | IS/Tn | TA55970 | NZ_CP012137 | 377934..378437 | 0.004 | |
| Shigella flexneri 4c strain 1205 | IS/Tn | TA55998 | NZ_CP012140 | 398404..398907 | 0.004 | |
| Shigella flexneri 1a strain 0228 | IS/Tn | TA57106 | NZ_CP012735 | 4601583..4602086 | 0.004 | |
| Shigella flexneri 1a strain 0670 | IS/Tn | TA74020 | NZ_CP020086 | 4009925..4010428 | 0.004 | |
| Shigella flexneri 4c strain 1602 | IS/Tn | TA74261 | NZ_CP020336 | 495660..496163 | 0.004 | |
| Shigella flexneri 4c strain 0702 | IS/Tn | TA74305 | NZ_CP020339 | 4326644..4327147 | 0.007 | |
| Shigella flexneri 1a strain 0439 | IS/Tn | TA74328 | NZ_CP020342 | 4616404..4616907 | 0.004 | |
| Shigella flexneri 1c strain Y394 | IS/Tn | TA75381 | NZ_CP020753 | 375467..375970 | 0.004 | |
| Shigella flexneri 7b strain 94-3007 | IS/Tn | TA87714 | NZ_CP024473 | 2333225..2333728 | 0.009 | |
| Shigella flexneri strain FDAARGOS_74 | IS/Tn | TA93308 | NZ_CP026098 | 3932199..3932702 | 0.007 | |
| Shigella flexneri strain 04-3145 | IS/Tn | TA95715 | NZ_CP026765 | 697488..697991 | 0.004 | |
| Shigella flexneri strain 98-3193 | IS/Tn | TA95819, TA95820 | NZ_CP026776 | 1935353..1935856 | 0.009 | |
| Shigella flexneri 2a strain ATCC 29903 | IS/Tn | TA95945 | NZ_CP026788 | 1962201..1962704 | 0.004 | |
| Shigella flexneri strain 61-4982 | IS/Tn | TA95967 | NZ_CP026792 | 3732884..3733387 | 0.009 | |
| Shigella flexneri strain 74-1170 | IS/Tn | TA95975 | NZ_CP026793 | 2987365..2987868 | 0.004 | |
| Shigella flexneri strain SFL1520 | IS/Tn | TA111865 | NZ_CP032513 | 251575..252078 | 0.007 | |
| Shigella flexneri strain SFL1520 | IS/Tn | TA111882 | NZ_CP032513 | 2827718..2828221 | 0.007 | |
| Shigella flexneri strain 2016AM-0877 | IS/Tn | TA113783 | NZ_CP033510 | 3327390..3327893 | 0.007 | |
| Shigella flexneri strain FDAARGOS_535 | IS/Tn | TA115091 | NZ_CP034060 | 3848224..3848727 | 0.009 | |
| Shigella flexneri strain 2013C-3749 | IS/Tn | TA116938 | NZ_CP034931 | 602205..602708 | 0.004 | |
| Shigella flexneri strain FC906 | IS/Tn | TA120609 | NZ_CP037996 | 1705217..1705720 | 0.007 | |
| Shigella flexneri Y strain PE577 | IS/Tn | TA136831, TA136832 | NZ_CP042980 | 353442..353945 | 0.007 | |
| Shigella flexneri strain AR-0425 | IS/Tn | TA140350 | NZ_CP044152 | 1493007..1493510 | 0.004 | |
| Shigella flexneri strain AR-0424 | IS/Tn | TA140380 | NZ_CP044155 | 3227503..3228006 | 0.004 | |
| Shigella flexneri strain AR-0423 | IS/Tn | TA140398 | NZ_CP044158 | 634654..635157 | 0.004 | |
| Shigella flexneri strain 5908.2 | IS/Tn | TA142024 | NZ_CP045522 | 988759..989262 | 0.007 | |
| Shigella flexneri 2a strain AUSMDU00010535 | IS/Tn | TA143082 | NZ_CP045941 | 3692957..3693460 | 0.004 | |
| Shigella flexneri strain FDAARGOS_691 | IS/Tn | TA160610 | NZ_CP054913 | 1683928..1684431 | 0.004 | |
| Shigella flexneri strain FDAARGOS_691 | IS/Tn | TA160613 | NZ_CP054913 | 2755478..2755981 | 0.007 | |
| Shigella flexneri strain CMCC51574 | IS/Tn | TA219776 | NZ_CP084879 | 1116861..1117364 | 0.009 | |
| Shigella flexneri strain 3160_NCHU22 | IS/Tn | TA240858, TA240859 | NZ_CP094987 | 1124286..1124789 | 0.004 | |
| Shigella flexneri strain E | IS/Tn | TA246283, TA246284 | NZ_CP097828 | 2995294..2995797 | 0.009 | |
| Shigella flexneri strain D | IS/Tn | TA246312 | NZ_CP097831 | 4394832..4395335 | 0.009 | |
| Shigella flexneri strain C | IS/Tn | TA246328 | NZ_CP097834 | 2350801..2351304 | 0.009 | |
| Shigella flexneri strain B | IS/Tn | TA246340 | NZ_CP097837 | 899308..899811 | 0.009 | |
| Shigella flexneri strain A | IS/Tn | TA246373 | NZ_CP097840 | 4394016..4394519 | 0.009 | |
| Shigella flexneri 2a strain Sflex 21-42 | IS/Tn | TA276096 | NZ_CP121223 | 2769482..2769985 | 0.007 | |
| Shigella flexneri strain MMGSG_23 | IS/Tn | TA278941 | NZ_CP123365 | 18684..19187 | 0.009 | |
| Shigella flexneri strain MMGSG_23 | IS/Tn | NZ_CP123365 | 3665176..3665679 | 0.007 | ||
| Shigella flexneri strain MMGSG_23 | IS/Tn | TA278943 | NZ_CP123365 | 378888..379391 | 0.004 | |
| Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 | IS/Tn | TA288254, TA288255 | NZ_LR213452 | 3392266..3392769 | 0.009 | |
| Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 | IS/Tn | TA288278 | NZ_LR213455 | 3602913..3603416 | 0.004 | |
| Shigella flexneri 3a isolate 83 | IS/Tn | TA289456 | NZ_LR878365 | 3519324..3519827 | 0.009 |