MGE detailed information
MGE type: Genomic_island MGE length: 23130 bp
Accession: NZ_NQJO01000001 Location: 3404618..3427747 Organism: Erwinia amylovora strain CTBT3-1 tig00000000 Replicon: chromosome
Accession: NZ_NQJO01000001 Location: 3404618..3427747 Organism: Erwinia amylovora strain CTBT3-1 tig00000000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS942_RS16075 | 3400337..3403702 | + | 3366 | WP_004155194.1 | ATP-binding protein | - |
| CS942_RS16080 | 3403999..3404199 | - | 201 | Protein_3033 | transposase | - |
| CS942_RS16085 | 3404618..3404893 | - | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CS942_RS16090 | 3404897..3405145 | - | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CS942_RS16095 | 3405242..3406075 | - | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| CS942_RS16100 | 3406188..3406508 | - | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| CS942_RS16105 | 3406545..3406868 | - | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CS942_RS16110 | 3406881..3407351 | - | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| CS942_RS16115 | 3407422..3407996 | - | 575 | Protein_3040 | DUF932 domain-containing protein | - |
| CS942_RS16120 | 3408221..3408463 | - | 243 | WP_004155184.1 | hypothetical protein | - |
| CS942_RS16130 | 3409673..3409870 | + | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| CS942_RS19830 | 3409978..3410572 | + | 595 | Protein_3043 | hypothetical protein | - |
| CS942_RS16140 | 3410772..3411857 | + | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| CS942_RS16145 | 3411854..3413488 | + | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| CS942_RS16150 | 3413478..3415478 | + | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| CS942_RS16155 | 3415478..3415831 | + | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| CS942_RS16160 | 3415836..3417176 | + | 1341 | WP_009349900.1 | class I SAM-dependent methyltransferase | - |
| CS942_RS16165 | 3417381..3418202 | - | 822 | WP_099258331.1 | restriction endonuclease | - |
| CS942_RS16170 | 3418199..3423280 | - | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| CS942_RS16175 | 3423261..3424583 | - | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| CS942_RS16180 | 3424588..3426234 | - | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| CS942_RS16185 | 3426470..3427747 | - | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| CS942_RS16195 | 3428368..3428877 | + | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| CS942_RS16200 | 3429048..3430547 | + | 1500 | WP_099258332.1 | DUF853 domain-containing protein | - |
| CS942_RS16205 | 3430549..3431826 | + | 1278 | WP_099258333.1 | DUF445 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora CFBP1430 | Genomic island | TA24673, TA24674 | NC_013961 | 445798..469717 | 0.001 | |
| Erwinia amylovora strain E-2 | Genomic island | TA89363, TA89364 | NZ_CP024970 | 3303142..3326289 | 0 | |
| Erwinia amylovora strain FB-20 | Genomic island | TA152398, TA152399 | NZ_CP050240 | 3299676..3323238 | 0.001 | |
| Erwinia amylovora strain FB-307 | Genomic island | TA152408, TA152409 | NZ_CP050242 | 3300332..3323509 | 0 | |
| Erwinia amylovora strain TS3238 | Genomic island | TA152418, TA152419 | NZ_CP050244 | 3300539..3323710 | 0 | |
| Erwinia amylovora strain FB-86 | Genomic island | TA152433, TA152434 | NZ_CP050258 | 3300540..3323711 | 0 | |
| Erwinia amylovora strain FB-207 | Genomic island | TA152444, TA152445 | NZ_CP050263 | 3300540..3323711 | 0 | |
| Erwinia amylovora strain Ea1189 | Genomic island | TA162043, TA162044 | NZ_CP055227 | 448714..472633 | 0.001 | |
| Erwinia amylovora strain TS3128 | Genomic island | TA162503, TA162504 | NZ_CP056034 | 448874..472812 | 0.001 | |
| Erwinia amylovora strain Ea1/79Sm | Genomic island | TA181838, TA181839 | NZ_CP064855 | 449316..473236 | 0.001 | |
| Erwinia amylovora strain 17-2187 | Genomic island | TA185027, TA185028 | NZ_CP066794 | 448878..472816 | 0.001 | |
| Erwinia amylovora strain ATCC 15580 | Genomic island | TA185037, TA185038 | NZ_CP066796 | 448854..472772 | 0.001 | |
| Erwinia amylovora isolate CP201324 | Genomic island | TA205962, TA205963 | NZ_CP076589 | 571608..595546 | 0.001 | |
| Erwinia amylovora isolate CP200930 | Genomic island | TA205972, TA205973 | NZ_CP076590 | 223534..247472 | 0.001 | |
| Erwinia amylovora isolate CP201142 | Genomic island | TA205986, TA205987 | NZ_CP076591 | 1999856..2023027 | 0 | |
| Erwinia amylovora isolate CP20140001 | Genomic island | TA205996, TA205997 | NZ_CP076592 | 2304797..2328735 | 0.001 | |
| Erwinia amylovora isolate CP20086202 | Genomic island | TA206010, TA206011 | NZ_CP076594 | 3117326..3140888 | 0.001 | |
| Erwinia amylovora isolate CP20130202 | Genomic island | TA206016, TA206017 | NZ_CP076595 | 1620302..1643473 | 0 | |
| Erwinia amylovora isolate CP20161301 | Genomic island | TA206026, TA206027 | NZ_CP076596 | 2292161..2316099 | 0.001 | |
| Erwinia amylovora strain CP200242 isolate missinsg | Genomic island | TA208078, TA208079 | NZ_CP077850 | 3505434..3528605 | 0 | |
| Erwinia amylovora strain Ea102 | Genomic island | TA257031, TA257032 | NZ_CP104022 | 3297203..3320361 | 0 | |
| Erwinia amylovora strain Ea915 | Genomic island | TA257040, TA257041 | NZ_CP104025 | 3297198..3320356 | 0 | |
| Erwinia amylovora strain Ea915 | Genomic island | TA257040, TA257041 | NZ_CP104025 | 3297477..3320356 | 0.001 | |
| Erwinia amylovora strain 99east-3-1 | Genomic island | TA271321, TA271322 | NZ_CP117554 | 448846..472771 | 0.001 |