MGE detailed information
MGE type: MGE length: 1329 bp
Accession: NZ_CP037923 Location: 1937675..1939003 Organism: Shigella flexneri 5a str. M90T Replicon: chromosome
Accession: NZ_CP037923 Location: 1937675..1939003 Organism: Shigella flexneri 5a str. M90T Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKN05_RS10045 (EKN05_010070) | 1933893..1934246 | + | 354 | WP_001169669.1 | DsrE/F sulfur relay family protein YchN | - |
| EKN05_RS10050 (EKN05_010075) | 1934290..1934985 | - | 696 | WP_001295621.1 | glutathione-specific gamma-glutamylcyclotransferase | - |
| EKN05_RS10055 (EKN05_010080) | 1935143..1935373 | - | 231 | WP_001146444.1 | putative cation transport regulator ChaB | - |
| EKN05_RS10060 (EKN05_010085) | 1935643..1936743 | + | 1101 | WP_000063614.1 | sodium-potassium/proton antiporter ChaA | - |
| EKN05_RS10070 (EKN05_010090) | 1937148..1937255 | + | 108 | WP_000170961.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| EKN05_RS10080 (EKN05_010095) | 1937657..1939003 | + | 1347 | WP_000483773.1 | IS4 family transposase IS4 | Transposase |
| EKN05_RS10085 (EKN05_010100) | 1939121..1939228 | + | 108 | WP_000170954.1 | type I toxin-antitoxin system toxin Ldr family protein | - |
| EKN05_RS10090 (EKN05_010105) | 1939377..1940231 | - | 855 | WP_000811065.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| EKN05_RS10095 (EKN05_010110) | 1940267..1941076 | - | 810 | WP_001257041.1 | invasion regulator SirB1 | - |
| EKN05_RS10100 (EKN05_010115) | 1941080..1941472 | - | 393 | WP_000200378.1 | invasion regulator SirB2 | - |
| EKN05_RS10105 (EKN05_010120) | 1941469..1942302 | - | 834 | WP_000456467.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| EKN05_RS10110 (EKN05_010125) | 1942302..1943384 | - | 1083 | WP_000804726.1 | peptide chain release factor 1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 2a str. 301 | IS/Tn | TA20777 | NC_004337 | 411155..412483 | 0.002 | |
| Shigella flexneri 2a str. 2457T | IS/Tn | TA20936 | NC_004741 | 410956..412284 | 0.002 | |
| Shigella flexneri 5 str. 8401 | IS/Tn | TA21648, TA21650 | NC_008258 | 1278996..1280324 | 0.002 | |
| Shigella flexneri 5 str. 8401 | IS/Tn | TA21647 | NC_008258 | 448806..450134 | 0.004 | |
| Shigella flexneri 2002017 | IS/Tn | TA26533 | NC_017328 | 429019..430347 | 0.002 | |
| Shigella flexneri 2003036 isolate Human | IS/Tn | TA44915 | NZ_CP004056 | 391993..393321 | 0.002 | |
| Shigella flexneri Shi06HN006 isolate Human | IS/Tn | TA44936 | NZ_CP004057 | 410614..411942 | 0.001 | |
| Shigella flexneri G1663 | IS/Tn | TA45972 | NZ_CP007037 | 402423..403751 | 0.001 | |
| Shigella flexneri 2a strain 981 | IS/Tn | TA55971 | NZ_CP012137 | 410200..411528 | 0.002 | |
| Shigella flexneri 4c strain 1205 | IS/Tn | TA55999 | NZ_CP012140 | 430671..431999 | 0.001 | |
| Shigella flexneri 1a strain 0228 | IS/Tn | TA57105 | NZ_CP012735 | 4568491..4569819 | 0.001 | |
| Shigella flexneri 1a strain 0670 | IS/Tn | TA74019 | NZ_CP020086 | 3976833..3978161 | 0.002 | |
| Shigella flexneri 4c strain 1602 | IS/Tn | TA74262 | NZ_CP020336 | 528612..529940 | 0.002 | |
| Shigella flexneri 1a strain 0439 | IS/Tn | TA74327 | NZ_CP020342 | 4583312..4584640 | 0.002 | |
| Shigella flexneri 1c strain Y394 | IS/Tn | TA75382 | NZ_CP020753 | 407735..409063 | 0.001 | |
| Shigella flexneri 7b strain 94-3007 | IS/Tn | TA87715 | NZ_CP024473 | 2365492..2366820 | 0.001 | |
| Shigella flexneri strain FDAARGOS_74 | IS/Tn | NZ_CP026098 | 2934420..2935748 | 0.002 | ||
| Shigella flexneri strain FDAARGOS_74 | IS/Tn | TA93306 | NZ_CP026098 | 3780800..3782128 | 0.001 | |
| Shigella flexneri strain 04-3145 | IS/Tn | TA95716 | NZ_CP026765 | 729755..731083 | 0.001 | |
| Shigella flexneri Y strain 93-3063 | IS/Tn | TA95770 | NZ_CP026768 | 2017299..2018627 | 0 | |
| Shigella flexneri strain 98-3193 | IS/Tn | TA95818 | NZ_CP026776 | 1902263..1903591 | 0.001 | |
| Shigella flexneri 2a strain ATCC 29903 | IS/Tn | TA95944 | NZ_CP026788 | 1929109..1930437 | 0.002 | |
| Shigella flexneri strain 61-4982 | IS/Tn | TA95966 | NZ_CP026792 | 3699791..3701119 | 0.001 | |
| Shigella flexneri strain 74-1170 | IS/Tn | TA95976 | NZ_CP026793 | 3019613..3020941 | 0.002 | |
| Shigella flexneri strain NCTC 9728 | IS/Tn | TA96029 | NZ_CP026799 | 3217393..3218721 | 0.001 | |
| Shigella flexneri strain 89-141 | IS/Tn | NZ_CP026803 | 2080659..2081987 | 0.003 | ||
| Shigella flexneri strain 89-141 | IS/Tn | TA96055 | NZ_CP026803 | 292683..294011 | 0.003 | |
| Shigella flexneri strain SFL1520 | IS/Tn | NZ_CP032513 | 1879185..1880513 | 0.001 | ||
| Shigella flexneri strain SFL1520 | IS/Tn | TA111866 | NZ_CP032513 | 419531..420859 | 0.001 | |
| Shigella flexneri strain 2016AM-0877 | IS/Tn | TA113784 | NZ_CP033510 | 3359657..3360985 | 0.002 | |
| Shigella flexneri strain FDAARGOS_535 | IS/Tn | TA115090 | NZ_CP034060 | 3815132..3816460 | 0.001 | |
| Shigella flexneri strain 2013C-3749 | IS/Tn | TA116939 | NZ_CP034931 | 634472..635800 | 0.002 | |
| Shigella flexneri Y strain PE577 | IS/Tn | TA136833 | NZ_CP042980 | 385709..387037 | 0.001 | |
| Shigella flexneri strain AR-0425 | IS/Tn | TA140349 | NZ_CP044152 | 1459917..1461245 | 0.002 | |
| Shigella flexneri strain AR-0424 | IS/Tn | TA140381 | NZ_CP044155 | 3259770..3261098 | 0.002 | |
| Shigella flexneri strain AR-0423 | IS/Tn | TA140399 | NZ_CP044158 | 667076..668248 | 0.004 | |
| Shigella flexneri 2a strain AUSMDU00010535 | IS/Tn | TA143081 | NZ_CP045941 | 3659886..3661214 | 0 | |
| Shigella flexneri strain FDAARGOS_691 | IS/Tn | TA160611 | NZ_CP054913 | 1716195..1717523 | 0.001 | |
| Shigella flexneri strain CMCC51574 | IS/Tn | TA219777 | NZ_CP084879 | 1148935..1150263 | 0 | |
| Shigella flexneri strain P099 | IS/Tn | TA220628 | NZ_CP085202 | 3501557..3502885 | 0.001 | |
| Shigella flexneri strain 3160_NCHU22 | IS/Tn | TA240860 | NZ_CP094987 | 1156533..1157861 | 0 | |
| Shigella flexneri strain E | IS/Tn | TA246285 | NZ_CP097828 | 3027561..3028889 | 0.001 | |
| Shigella flexneri strain D | IS/Tn | TA246311 | NZ_CP097831 | 4361740..4363068 | 0.001 | |
| Shigella flexneri strain C | IS/Tn | TA246327 | NZ_CP097834 | 2317709..2319037 | 0.001 | |
| Shigella flexneri strain B | IS/Tn | TA246341 | NZ_CP097837 | 931575..932903 | 0.001 | |
| Shigella flexneri strain A | IS/Tn | TA246372 | NZ_CP097840 | 4360924..4362252 | 0.001 | |
| Shigella flexneri 2a strain Sflex 21-42 | IS/Tn | TA276097 | NZ_CP121223 | 2801749..2803077 | 0.002 | |
| Shigella flexneri strain MMGSG_23 | IS/Tn | TA278944 | NZ_CP123365 | 411155..412483 | 0.002 | |
| Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 | IS/Tn | TA288253 | NZ_LR213452 | 3359174..3360502 | 0.001 | |
| Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 | IS/Tn | TA288277 | NZ_LR213455 | 3569842..3571170 | 0.002 | |
| Shigella flexneri 3a isolate 83 | IS/Tn | NZ_LR878365 | 2538450..2539778 | 0.002 | ||
| Shigella flexneri 3a isolate 83 | IS/Tn | TA289454 | NZ_LR878365 | 3378147..3379475 | 0.001 |