Escherichia coli BW25113 strain K-12



NZ_CP009273 (chromosome)
 

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
T6SS ID Type Organism Replicon (Accession) Location Function

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Effector ID Locus tag (Gene) Classification Cognate immunity protein Related T6SS Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Immunity protein ID Locus tag (Gene) Related T6SS Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Cognate effector

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
ID           Locus tag (Gene) Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Response to T6SS attack Known or putative function
RSF000001 experimental BW25113_RS11580 (RcsB/ymgA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2309656..2310306 (+) 446984661 protective RcsB regulon; response envelope stress
RSF000002 experimental BW25113_RS11585 (RcsC) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2310506..2313355 (-) 446798755 protective RcsB regulon; response envelope stress
RSF000003 experimental BW25113_RS00985 (RcsF) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 216078..216482 (-) 447125073 protective RcsB regulon; response envelope stress
RSF000004 experimental BW25113_RS10750 (wcaA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2126039..2126878 (-) 446717386 protective RcsB regulon response envelope stress
RSF000005 experimental BW25113_RS00275 (surA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 53416..54702 (-) 446723144 protective Menbtane integrity
RSF000006 experimental BW25113_RS03235 (pagP) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 652013..652573 (+) 447025838 protective Menbtane integrity
RSF000007 experimental BW25113_RS00460 (ddlB) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 98720..99640 (+) 446052201 protective peptidoglycan synthesis
RSF000008 experimental BW25113_RS10855 (BaeR) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2157757..2158479 (+) 446060022 protective envelope stress response
RSF000009 experimental BW25113_RS18230 (gadA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 3659540..3660940 (-) 446294385 protective Acid stress response
RSF000010 experimental BW25113_RS07825 (gadB) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1564902..1566302 (-) 446281075 protective Acid stress response
RSF000011 experimental BW25113_RS07820 (gadC) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1563211..1564746 (-) 446168164 protective Acid stress response
RSF000012 experimental BW25113_RS18200 (gadE) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 3651726..3652253 (+) 446498836 protective Acid stress response
RSF000013 experimental BW25113_RS10355 (YeeN) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2050339..2051055 (+) 446455068 sensitive YebC/PmpR family DNA-binding transcriptional regulator
RSF000014 experimental BW25113_RS02065 (phoB) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 412598..413287 (+) 446036078 sensitive phosphate response regulator transcription factor
RSF000015 experimental BW25113_RS06710 (osmB) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1337367..1337585 (-) 446420398 protective Osmotic stress response
RSF000016 experimental BW25113_RS07770 (osmC) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1550882..1551313 (+) 446074450 protective Osmotic stress response
RSF000017 experimental BW25113_RS22785 (osmY) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 4601213..4601818 (+) 481041372 protective Osmotic stress response
RSF000018 experimental BW25113_RS03840 (tolB) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 773196..774488 (+) 481023805 protective Tol-Pal system protein
RSF000019 experimental BW25113_RS13420 (rseA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2702113..2702763 (-) 447091203 protective anti-sigma-E factor
RSF000027 experimental BW25113_RS00810 (degP) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 177371..178795 (+) 446676600 protective Maintaining envelope integrity
RSF000028 experimental BW25113_RS10765 (wza) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2129585..2130724 (-) 446900838 protective colanic acid synthesis
RSF000029 experimental BW25113_RS07765 (bdm) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1550322..1550537 (-) 446417916 protective -
RSF000030 experimental BW25113_RS10200 (RcsA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2017449..2018072 (+) 446026146 protective RcsB regulon response envelope stress
RSF000031 experimental BW25113_RS10690 (wcaJ) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 2113641..2115035 (-) 446105252 protective RcsB regulon response envelope stress
RSF000032 experimental BW25113_RS09120 (Spy) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1819397..1819882 (-) 447151728 protective Maintaining envelope integrity
RSF000035 experimental BW25113_RS02265 (clpP) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 452133..452756 (+) 446044398 sensitive serine protease
RSF000036 experimental BW25113_RS04580 (ClpA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 918720..920996 (+) 446856785 sensitive serine protease adapter
RSF000037 experimental BW25113_RS03725 (gltA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 748641..749924 (-) 446708488 sensitive citrate synthase
RSF000038 experimental BW25113_RS08730 (ydhS) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1741388..1742992 (+) 446639604 sensitive FAD/NAD(P) binding domain-containing protein
RSF000039 experimental BW25113_RS07100 (ydaE) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1412095..1412265 (-) 485720780 sensitive Rac prophage; zinc-binding protein
RSF000040 experimental BW25113_RS05200 (cbpA) Escherichia coli BW25113 strain K-12 chromosome (NZ_CP009273) 1058311..1059231 (-) 446342766 sensitive Curved DNA-binding protein

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Accessory protein ID Locus tag (Gene) Related T6SS Type             Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Related structure protein Related effector