Vibrio cholerae V52
Experimental investigation has been performed.
Bioinformatics investigation has been performed| T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
|---|---|---|---|---|---|
| T6SS00790 | i1 | Vibrio cholerae V52 | chromosome (NZ_KQ410497) | 202021..225793 | anti-bacterial; anti-eukaryotic; effector translocation; virulence; adherence |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
|---|---|---|---|---|---|---|---|---|---|
| REG0317 |
VCV52_RS13040 (rpoN) | T6SS00790 |
protein | Global regulator | Vibrio cholerae V52 | chromosome (NZ_KQ410502) | 216932..218395 (-) | 446727517 | Unknown (↓) |
| REG0315 |
VCV52_RS10780 (TfoX) | T6SS00790 |
protein | Global regulator | Vibrio cholerae V52 | chromosome (NZ_KQ410501) | 68827..69435 (-) | 487807468 | Unknown (↓) |
| REG0316 |
VCV52_RS01020 (VasH) | T6SS00790 |
protein | Global regulator | Vibrio cholerae V52 | chromosome (NZ_KQ410497) | 212259..213851 (-) | 446006947 | Unknown (↓) |
| REG0369 |
VCV52_RS14135 (wigR/phoB/vxrB) | T6SS00790 |
protein | TCS-RR | Vibrio cholerae V52 | chromosome (NZ_KQ410503) | 201806..202495 (-) | 446013262 | T6SS transcription level (↓) |
Experimental investigation has been performed. Bioinformatics investigation has been performed Experimental investigation has been performed. Bioinformatics investigation has been performed| Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
|---|---|---|---|---|---|---|---|
| IMU00272 |
VCV52_RS00985 | T6SS00790 |
Vibrio cholerae V52 | chromosome (NZ_KQ410497) | 201656..202024 (-) | WP_001061295.1 | EFF76629 |
| IMU38206 |
VCV52_RS20260 | T6SS00790 |
Vibrio cholerae V52 | chromosome (NZ_KQ410497) | 31747..31974 (-) | WP_001911595.1 | EFF76629 |
| IMU38207 |
VCV52_RS01465 | T6SS00790 |
Vibrio cholerae V52 | chromosome (NZ_KQ410497) | 315306..316034 (-) | WP_000904079.1 | EFF76629 |
| IMU38208 |
VCV52_RS06820 | T6SS00790 |
Vibrio cholerae V52 | chromosome (NZ_KQ410498) | 431552..432295 (-) | WP_000771534.1 | EFF76632 |
Experimental investigation has been performed. Bioinformatics investigation has been performed| ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
|---|---|---|---|---|---|---|---|
| RSF000034 |
VCV52_RS11930 (vpsA) | Vibrio cholerae V52 | chromosome (NZ_KQ410501) | 316448..317566 (-) | 446679410 | protective | Vibrio polysaccharide (VPS) expression |
| RSF000033 |
VCV52_0688 (wigR/phoB/vxrB) | Vibrio cholerae V52 | chromosome (NZ_KQ410503) | 201806..202495 (-) | 446013262 | protective | cell-wall damage response |
Experimental investigation has been performed. Bioinformatics investigation has been performed| Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
|---|---|---|---|---|---|---|---|---|---|
| ACP00026 |
VCV52_RS01475 (vasW) | T6SS00790 |
adaptor | Vibrio cholerae V52 | chromosome (NZ_KQ410497) | 319289..320176 (-) | 447180717 | - | VasX |
| ACP44067 |
VCV52_RS01000 (tagA) | T6SS00790 |
structure affiliated protein | Vibrio cholerae V52 | chromosome (NZ_KQ410497) | 205313..206575 (-) | WP_000073086.1 | VCV52_RS01060 (tssE); VCV52_RS01055 (tssF); VCV52_RS01030 (tssL); VCV52_RS01005 (tssM) | VCV52_RS06835 (vgrG1); VCV52_RS00990 (vgrG3); VCV52_RS01485 (hcp-2) |
| ACP00025 |
VCV52_1391 (tap-1) | T6SS00790 |
adaptor | Vibrio cholerae V52 | chromosome (NZ_KQ410498) | 434220..435080 (-) | 446336115 | VgrG-1 | TseL |