Detailed information NTG0116549

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AU14_RS23940
• Genome accession: NZ_CP007151
• Coordinates: 2947288..2947434 (+)
• Length: 48 a.a.
• NCBI ID: WP_158498322.1
• Uniprot ID: -
• Organism: Marinobacter similis strain A3d10
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2942288..2952434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AU14_RS21850 (AU14_14125)	-	2942401..2942499 (+)	99	WP_236744629.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
AU14_RS21855	-	2942547..2942792 (+)	246	WP_236744082.1	PilW family protein	-
AU14_RS13670 (AU14_14130)	-	2942741..2943493 (+)	753	WP_041341664.1	PilW family protein	-
AU14_RS13675 (AU14_14135)	-	2943507..2943989 (+)	483	WP_041341667.1	PilX N-terminal domain-containing pilus assembly protein	-
AU14_RS13680 (AU14_14140)	-	2944015..2944389 (+)	375	WP_041341671.1	hypothetical protein	-
AU14_RS21860 (AU14_14145)	-	2944457..2944642 (+)	186	WP_052472056.1	VWA domain-containing protein	-
AU14_RS13685 (AU14_14150)	-	2944642..2946579 (+)	1938	WP_052472057.1	pilus assembly protein	-
AU14_RS21865 (AU14_14155)	-	2946549..2946938 (+)	390	WP_052472058.1	hypothetical protein	-
AU14_RS21870	-	2946928..2947281 (+)	354	WP_052472059.1	hypothetical protein	-
AU14_RS23940	pilA	2947288..2947434 (+)	147	WP_158498322.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
AU14_RS23945	-	2947452..2947736 (+)	285	WP_158498323.1	type IV pilin protein	-
AU14_RS13695 (AU14_14165)	-	2947770..2948330 (-)	561	WP_041341674.1	GspH/FimT family pseudopilin	-
AU14_RS13700 (AU14_14170)	pilR	2948442..2949824 (-)	1383	WP_041341677.1	sigma-54 dependent transcriptional regulator	Regulator
AU14_RS13705 (AU14_14175)	-	2949881..2951524 (-)	1644	WP_041341680.1	ATP-binding protein	-

Sequence

Protein

• Length: 48 a.a.
• Molecular weight: 5361.33 Da
• Isoelectric Point: 8.9645

>NTDB_id=116549 AU14_RS23940 WP_158498322.1 2947288..2947434(+) (pilA) [Marinobacter similis strain A3d10]
MGYPRKEGGFTLIELLIVVAIIGIVAAIAYPSYQEYAERTRRSMPRGC

Nucleotide

• Length: 147 bp

>NTDB_id=116549 AU14_RS23940 WP_158498322.1 2947288..2947434(+) (pilA) [Marinobacter similis strain A3d10]
ATGGGTTACCCAAGAAAGGAAGGAGGTTTTACGCTCATTGAGTTGCTGATTGTTGTCGCAATTATCGGCATCGTTGCGGC
CATTGCCTATCCAAGCTATCAGGAGTACGCGGAACGAACTCGCAGGTCGATGCCCAGGGGGTGTTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comF	Acinetobacter baylyi ADP1	74.359	81.25	0.604
pilA	Vibrio campbellii strain DS40M4	58.14	89.583	0.521
pilA	Ralstonia pseudosolanacearum GMI1000	67.568	77.083	0.521
pilA2	Legionella pneumophila strain ERS1305867	69.444	75	0.521
pilA2	Legionella pneumophila str. Paris	69.444	75	0.521
pilA	Pseudomonas aeruginosa PAK	66.667	75	0.5
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	64.865	77.083	0.5
comP	Acinetobacter baylyi ADP1	64.865	77.083	0.5
comE	Acinetobacter baylyi ADP1	63.158	79.167	0.5
pilA/pilAI	Pseudomonas stutzeri DSM 10701	72.727	68.75	0.5
pilA	Acinetobacter nosocomialis M2	61.538	81.25	0.5
pilA/pilAII	Pseudomonas stutzeri DSM 10701	71.875	66.667	0.479
pilA	Vibrio parahaemolyticus RIMD 2210633	62.162	77.083	0.479
pilA	Acinetobacter baumannii strain A118	65.714	72.917	0.479
pilA/pilA1	Eikenella corrodens VA1	65.714	72.917	0.479
pilA/pilA1	Synechocystis sp. PCC 6803	58.974	81.25	0.479
pilL	Neisseria gonorrhoeae MS11	57.895	79.167	0.458
pilX	Neisseria meningitidis 8013	57.895	79.167	0.458
pilE	Acinetobacter baumannii D1279779	59.459	77.083	0.458
pilE	Neisseria gonorrhoeae strain FA1090	59.459	77.083	0.458
pilE	Neisseria gonorrhoeae MS11	59.459	77.083	0.458
pilA	Haemophilus influenzae 86-028NP	67.742	64.583	0.438
pilA	Haemophilus influenzae Rd KW20	67.742	64.583	0.438
pilY2	Acinetobacter baumannii D1279779	50	87.5	0.438
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	58.333	75	0.437
pilA	Vibrio cholerae C6706	58.333	75	0.437
pilA	Vibrio cholerae strain A1552	58.333	75	0.437
pilA	Glaesserella parasuis strain SC1401	57.143	72.917	0.417
pilE	Legionella pneumophila strain ERS1305867	50	79.167	0.396
pilE	Legionella pneumophila str. Paris	50	79.167	0.396
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	75	50	0.375