MGE detailed information
MGE type: Integron MGE length: 89809 bp
Accession: NZ_LT992489 Location: 379701..469509 Organism: Vibrio cholerae strain 4295STDY6534232 Replicon: chromosome
Accession: NZ_LT992489 Location: 379701..469509 Organism: Vibrio cholerae strain 4295STDY6534232 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DG176_RS16000 () | 375260..378037 | - | 2778 | WP_000509635.1 | alkaline phosphatase family protein | - |
| DG176_RS16020 () | 380188..380601 | - | 414 | WP_000049420.1 | VOC family protein | - |
| DG176_RS16030 () | 380785..381300 | - | 516 | WP_000343779.1 | hypothetical protein | VF |
| DG176_RS16035 () | 381494..381778 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DG176_RS16040 () | 381775..382053 | + | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| DG176_RS16045 () | 382192..382587 | - | 396 | WP_001000867.1 | hypothetical protein | - |
| DG176_RS16055 () | 382838..382963 | - | 126 | WP_001905700.1 | DUF645 family protein | - |
| DG176_RS16060 () | 383262..383783 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| DG176_RS16065 () | 383777..384046 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| DG176_RS16070 () | 384077..384181 | - | 105 | WP_099607150.1 | acetyltransferase | Antitoxin Detail |
| DG176_RS16075 () | 384238..384837 | - | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| DG176_RS16080 () | 384987..385859 | - | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| DG176_RS16085 () | 386034..386252 | - | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| DG176_RS16090 () | 386316..386753 | - | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| DG176_RS16095 () | 386872..387081 | - | 210 | Protein_329 | GNAT family N-acetyltransferase | - |
| DG176_RS16100 () | 387217..387606 | - | 390 | WP_001081302.1 | hypothetical protein | - |
| DG176_RS16105 () | 387763..388680 | - | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| DG176_RS16110 () | 388914..389216 | - | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS16115 () | 389204..389461 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG176_RS16125 () | 389663..390196 | - | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DG176_RS16130 () | 390193..390618 | - | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DG176_RS16135 () | 390685..391056 | - | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| DG176_RS16140 () | 391197..391484 | - | 288 | WP_000426470.1 | hypothetical protein | - |
| DG176_RS16145 () | 391636..392304 | - | 669 | WP_000043871.1 | hypothetical protein | - |
| DG176_RS16150 () | 392535..392807 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DG176_RS16155 () | 392804..393301 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DG176_RS16165 () | 393503..393655 | - | 153 | WP_001884520.1 | DUF645 family protein | - |
| DG176_RS16170 () | 393977..394432 | - | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| DG176_RS16175 () | 394560..394847 | - | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS16180 () | 394837..395088 | - | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG176_RS16185 () | 395302..395715 | - | 414 | WP_000049417.1 | VOC family protein | - |
| DG176_RS16190 () | 395790..395933 | - | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| DG176_RS16195 () | 395903..396304 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DG176_RS16200 () | 396304..396996 | - | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| DG176_RS16205 () | 397133..397439 | - | 307 | Protein_349 | Streptogramin A acetyltransferase | VF |
| DG176_RS16210 () | 397507..398487 | + | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| DG176_RS19665 () | 398612..398767 | - | 156 | WP_000751734.1 | hypothetical protein | - |
| DG176_RS16215 () | 398935..399369 | - | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| DG176_RS16220 () | 399506..399820 | - | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| DG176_RS16225 () | 399807..400139 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS16235 () | 400480..400707 | - | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| DG176_RS19790 () | 400656..400769 | - | 114 | WP_001889158.1 | hypothetical protein | - |
| DG176_RS16255 () | 400935..401216 | - | 282 | WP_001894453.1 | DUF1289 domain-containing protein | - |
| DG176_RS19795 () | 401165..401279 | - | 115 | Protein_358 | acetyltransferase | - |
| DG176_RS16260 () | 401336..401713 | - | 378 | WP_000411109.1 | hypothetical protein | - |
| DG176_RS16265 () | 401884..402126 | - | 243 | WP_000107461.1 | hypothetical protein | - |
| DG176_RS16270 () | 402328..402714 | - | 387 | WP_000703163.1 | VOC family protein | - |
| DG176_RS19865 () | 402923..403094 | - | 172 | Protein_362 | DUF645 family protein | - |
| DG176_RS16280 () | 403412..403681 | - | 270 | WP_001198131.1 | hypothetical protein | - |
| DG176_RS16285 () | 404041..404214 | - | 174 | WP_001882305.1 | DUF3709 domain-containing protein | - |
| DG176_RS19715 () | 404495..404698 | - | 204 | WP_001911745.1 | hypothetical protein | - |
| DG176_RS16300 () | 404985..405536 | - | 552 | WP_000821930.1 | hypothetical protein | - |
| DG176_RS16305 () | 405692..406549 | - | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| DG176_RS16310 () | 406696..407310 | - | 615 | WP_000789575.1 | hypothetical protein | - |
| DG176_RS16315 () | 407633..407803 | - | 171 | WP_001882300.1 | DUF645 family protein | - |
| DG176_RS16325 () | 408107..408685 | - | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| DG176_RS16330 () | 408936..409921 | + | 986 | Protein_371 | Sulfate-binding protein | VF |
| DG176_RS16335 () | 410304..410768 | + | 465 | WP_000140244.1 | hypothetical protein | - |
| DG176_RS16340 () | 410868..411270 | - | 403 | Protein_373 | hypothetical protein | - |
| DG176_RS16350 () | 411426..411926 | - | 501 | WP_000789723.1 | hypothetical protein | - |
| DG176_RS16355 () | 412064..412594 | - | 531 | WP_000415563.1 | hypothetical protein | - |
| DG176_RS16360 () | 412745..413140 | - | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| DG176_RS16365 () | 413348..413773 | - | 426 | WP_000415748.1 | hypothetical protein | - |
| DG176_RS16370 () | 414045..414698 | - | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| DG176_RS16385 () | 415269..415517 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG176_RS16390 () | 415507..415797 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS16395 () | 415933..416448 | - | 516 | WP_001201528.1 | lipocalin family protein | - |
| DG176_RS16400 () | 416585..417061 | - | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| DG176_RS16405 () | 417089..417199 | - | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| DG176_RS16410 () | 417196..418125 | - | 930 | WP_000335802.1 | hypothetical protein | - |
| DG176_RS16415 () | 418245..418691 | - | 447 | WP_000128977.1 | hypothetical protein | - |
| DG176_RS16420 () | 418844..419848 | - | 1005 | WP_000964925.1 | LD-carboxypeptidase | - |
| DG176_RS19810 () | 420061..420099 | - | 39 | WP_106019119.1 | hypothetical protein | - |
| DG176_RS19815 () | 420115..420240 | - | 126 | WP_001944767.1 | DUF645 family protein | - |
| DG176_RS19820 () | 420417..420527 | - | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| DG176_RS16445 () | 420524..420841 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DG176_RS16450 () | 420852..421139 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS16455 () | 421406..421586 | - | 181 | Protein_392 | DUF645 family protein | - |
| DG176_RS16460 () | 422011..422244 | - | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| DG176_RS16465 () | 422647..422865 | - | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| DG176_RS16470 () | 423175..423828 | - | 654 | WP_000226874.1 | hypothetical protein | - |
| DG176_RS16475 () | 423885..424394 | - | 510 | WP_000405987.1 | GNAT family N-acetyltransferase | - |
| DG176_RS16480 () | 424636..424878 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG176_RS16485 () | 424897..425214 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS19825 () | 425408..425503 | - | 96 | WP_001907607.1 | DUF645 family protein | - |
| DG176_RS19670 () | 425859..426152 | - | 294 | WP_125460920.1 | hypothetical protein | - |
| DG176_RS16505 () | 426299..426646 | - | 348 | WP_000933409.1 | hypothetical protein | - |
| DG176_RS16510 () | 426795..427220 | - | 426 | WP_000403014.1 | GNAT family N-acetyltransferase | - |
| DG176_RS16515 () | 427416..427595 | - | 180 | WP_001883039.1 | DUF645 family protein | - |
| DG176_RS16520 () | 427892..428428 | - | 537 | WP_000644491.1 | nucleotidyltransferase family protein | - |
| DG176_RS16525 () | 428572..428967 | - | 396 | WP_000046953.1 | hypothetical protein | - |
| DG176_RS16530 () | 429144..429325 | - | 182 | Protein_406 | DUF645 family protein | - |
| DG176_RS16535 () | 429628..430023 | - | 396 | WP_000046952.1 | hypothetical protein | - |
| DG176_RS16540 () | 430276..430554 | - | 279 | WP_000280319.1 | DUF3709 domain-containing protein | - |
| DG176_RS16545 () | 430672..430782 | - | 111 | Protein_409 | DUF3265 domain-containing protein | - |
| DG176_RS16550 () | 430779..431786 | - | 1008 | WP_000093800.1 | DUF4365 domain-containing protein | - |
| DG176_RS16560 () | 432204..433381 | + | 1178 | WP_086010879.1 | IS3 family transposase ISVch4 | Transposase |
| DG176_RS16565 () | 433378..434073 | + | 696 | WP_000213836.1 | hypothetical protein | - |
| DG176_RS16570 () | 434134..434640 | - | 507 | WP_001921103.1 | hypothetical protein | - |
| DG176_RS16575 () | 434681..435703 | - | 1023 | WP_000954291.1 | hypothetical protein | - |
| DG176_RS16580 () | 435815..435955 | - | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| DG176_RS16585 () | 435921..436856 | - | 936 | WP_000051985.1 | restriction endonuclease | - |
| DG176_RS16590 () | 437137..437736 | - | 600 | WP_000429495.1 | hypothetical protein | - |
| DG176_RS16600 () | 437891..438157 | - | 267 | WP_000937852.1 | hypothetical protein | - |
| DG176_RS16610 () | 438371..439054 | - | 684 | WP_000877436.1 | hypothetical protein | - |
| DG176_RS16620 () | 439478..439570 | - | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| DG176_RS16625 () | 439592..440170 | - | 579 | WP_000110120.1 | hypothetical protein | - |
| DG176_RS16635 () | 440399..440641 | + | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| DG176_RS16640 () | 440638..440937 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS16645 () | 441065..441460 | - | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| DG176_RS16650 () | 441674..441853 | - | 180 | WP_001883058.1 | DUF645 family protein | - |
| DG176_RS16665 () | 442431..442541 | - | 111 | WP_079857360.1 | DUF3265 domain-containing protein | - |
| DG176_RS16670 () | 442551..443249 | - | 699 | WP_001890502.1 | hypothetical protein | - |
| DG176_RS16675 () | 443372..443998 | - | 627 | WP_000365424.1 | LysE family translocator | - |
| DG176_RS16680 () | 444040..444132 | - | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| DG176_RS16685 () | 444147..444620 | - | 474 | WP_001161076.1 | GrpB family protein | - |
| DG176_RS16690 () | 444820..445002 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| DG176_RS19830 () | 445063..445191 | - | 129 | WP_071908338.1 | general secretion pathway protein GspI | - |
| DG176_RS16705 () | 445294..446088 | - | 795 | WP_001911581.1 | hypothetical protein | - |
| DG176_RS16710 () | 446184..446429 | - | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| DG176_RS16715 () | 446416..446682 | - | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| DG176_RS16725 () | 446867..447529 | - | 663 | WP_000960654.1 | hypothetical protein | - |
| DG176_RS16730 () | 447657..448124 | - | 468 | WP_001289288.1 | OsmC family protein | - |
| DG176_RS19835 () | 448336..448374 | - | 39 | WP_082798268.1 | hypothetical protein | - |
| DG176_RS19840 () | 448428..448571 | - | 144 | Protein_439 | DUF645 family protein | - |
| DG176_RS16750 () | 448946..449224 | - | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| DG176_RS16755 () | 449476..449718 | - | 243 | WP_000107461.1 | hypothetical protein | - |
| DG176_RS16760 () | 449810..449959 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| DG176_RS16765 () | 449932..450183 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| DG176_RS16770 () | 450378..450764 | - | 387 | WP_000703163.1 | VOC family protein | - |
| DG176_RS16775 () | 450754..450855 | - | 102 | WP_001921603.1 | hypothetical protein | - |
| DG176_RS16780 () | 451055..451261 | - | 207 | Protein_446 | DUF3709 domain-containing protein | - |
| DG176_RS16785 () | 451513..451791 | - | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| DG176_RS16795 () | 452077..452355 | + | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DG176_RS16800 () | 452348..452617 | + | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| DG176_RS16805 () | 452765..453211 | - | 447 | WP_000006157.1 | hypothetical protein | - |
| DG176_RS16815 () | 453407..453445 | - | 39 | WP_106019118.1 | hypothetical protein | - |
| DG176_RS16820 () | 453461..453586 | - | 126 | WP_001900195.1 | DUF645 family protein | - |
| DG176_RS16825 () | 453979..454251 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DG176_RS16830 () | 454248..454745 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DG176_RS16835 () | 454895..455410 | - | 516 | WP_001201509.1 | lipocalin family protein | - |
| DG176_RS16840 () | 455547..456083 | - | 537 | WP_000469482.1 | GNAT family N-acetyltransferase | - |
| DG176_RS16855 () | 456341..456622 | - | 282 | WP_001894429.1 | DUF1289 domain-containing protein | - |
| DG176_RS16860 () | 456571..456684 | - | 114 | WP_001900214.1 | hypothetical protein | - |
| DG176_RS16865 () | 456741..457127 | - | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| DG176_RS16870 () | 457371..457613 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG176_RS16875 () | 457632..457949 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG176_RS16885 () | 458103..458441 | - | 339 | WP_000713853.1 | hypothetical protein | - |
| DG176_RS16890 () | 458599..459303 | - | 705 | WP_000087610.1 | HNH endonuclease | - |
| DG176_RS16895 () | 459465..460673 | - | 1209 | WP_000272282.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| DG176_RS16900 () | 460835..461512 | - | 678 | WP_000254617.1 | HNH endonuclease | - |
| DG176_RS16910 () | 461707..461889 | - | 183 | WP_000923153.1 | DUF645 family protein | - |
| DG176_RS16915 () | 462243..462425 | - | 183 | WP_000923340.1 | DUF645 family protein | - |
| DG176_RS16920 () | 462721..463098 | - | 378 | WP_000411106.1 | hypothetical protein | - |
| DG176_RS16925 () | 463303..463485 | - | 183 | WP_000923334.1 | DUF645 family protein | - |
| DG176_RS16930 () | 463510..463689 | - | 180 | WP_001203705.1 | hypothetical protein | - |
| DG176_RS16935 () | 463787..464539 | - | 753 | WP_000116045.1 | putative oxidoreductase YgfF | VF |
| DG176_RS16945 () | 464695..465324 | - | 630 | WP_001009012.1 | Chloramphenicol acetyltransferase | VF |
| DG176_RS16955 () | 465475..465906 | - | 432 | WP_000795498.1 | hypothetical protein | - |
| DG176_RS16960 () | 465937..466086 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| DG176_RS16965 () | 466059..466310 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| DG176_RS16970 () | 466566..466748 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| DG176_RS19870 () | 467412..467501 | - | 90 | WP_072615218.1 | DUF3265 domain-containing protein | - |
| DG176_RS16990 () | 467545..467871 | - | 327 | WP_001921550.1 | hypothetical protein | - |
| DG176_RS16995 () | 467900..468067 | - | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| DG176_RS17005 () | 468547..469509 | + | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| DG176_RS17010 () | 469591..469944 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| DG176_RS17015 () | 469986..470180 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| DG176_RS17020 () | 470284..470835 | - | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| DG176_RS17025 () | 470839..472767 | - | 1929 | WP_001121779.1 | threonine--tRNA ligase | - |
| DG176_RS19725 () | 473036..473263 | - | 228 | WP_001911595.1 | hypothetical protein | - |
| DG176_RS17035 () | 473388..474059 | - | 672 | WP_000132861.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Vibrio cholerae O1 biovar El Tor str. N16961 | Integron | TA164, TA169, TA166, TA167, TA179, TA170, TA171, TA172, TA173, TA174, TA175, TA176, TA177, TA178, TA168, TA165, TA10030, TA10035 | NC_002506 | 309750..435387 | 0.005 |