Detailed information NTG0030809

Bioinformatically predicted

Overview

• Name: pilA/pilA1
• Type: Machinery gene
• Locus tag: EMIN_RS08875
• Genome accession: NC_010644
• Coordinates: 744739..744885 (+)
• Length: 48 a.a.
• NCBI ID: WP_012414839.1
• Uniprot ID: B2KC97
• Organism: Elusimicrobium minutum Pei191
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 739739..749885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EMIN_RS03430 (Emin_0665)	rimP	739782..740240 (+)	459	WP_012414835.1	ribosome maturation factor RimP	-
EMIN_RS03435 (Emin_0666)	nusA	740292..741683 (+)	1392	WP_012414836.1	transcription termination/antitermination protein NusA	-
EMIN_RS03440 (Emin_0667)	infB	741658..744138 (+)	2481	WP_012414837.1	translation initiation factor IF-2	-
EMIN_RS09435 (Emin_0668)	-	744260..744727 (+)	468	WP_012414838.1	type IV pilin protein	-
EMIN_RS08875 (Emin_0669)	pilA/pilA1	744739..744885 (+)	147	WP_012414839.1	type IV pilin protein	Machinery gene
EMIN_RS08725 (Emin_0670)	-	744833..745246 (+)	414	WP_187146170.1	hypothetical protein	-
EMIN_RS03455 (Emin_0671)	-	745419..745985 (-)	567	WP_012414841.1	hypothetical protein	-
EMIN_RS03460 (Emin_0672)	-	746041..746928 (-)	888	WP_012414842.1	hypothetical protein	-
EMIN_RS03465 (Emin_0673)	-	747130..748542 (+)	1413	WP_012414843.1	alanine/glycine:cation symporter family protein	-
EMIN_RS03470 (Emin_0674)	rbfA	748616..748975 (+)	360	WP_012414844.1	30S ribosome-binding factor RbfA	-

Sequence

Protein

• Length: 48 a.a.
• Molecular weight: 5128.27 Da
• Isoelectric Point: 10.0971

>NTDB_id=30809 EMIN_RS08875 WP_012414839.1 744739..744885(+) (pilA/pilA1) [Elusimicrobium minutum Pei191]
MKKGFTLIELLVVVLIIGILAAIALPQYTLTVEKSRASEGFILGRAGL

Nucleotide

• Length: 147 bp

>NTDB_id=30809 EMIN_RS08875 WP_012414839.1 744739..744885(+) (pilA/pilA1) [Elusimicrobium minutum Pei191]
ATGAAGAAAGGTTTTACATTAATAGAGCTTTTGGTAGTTGTGCTTATAATAGGAATATTAGCGGCCATAGCCCTGCCGCA
ATATACTTTAACGGTTGAAAAATCACGCGCGTCTGAAGGTTTTATATTGGGAAGGGCGGGCCTTTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-25)

3D structure

• AlphaFold DB: B2KC97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Acinetobacter nosocomialis M2	66.667	87.5	0.583
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	61.905	87.5	0.542
pilA	Acinetobacter baumannii strain A118	65	83.333	0.542
pilA/pilA1	Synechocystis sp. PCC 6803	72.222	75	0.542
pilA/pilA1	Eikenella corrodens VA1	60.976	85.417	0.521
pilA2	Legionella pneumophila strain ERS1305867	59.524	87.5	0.521
pilA2	Legionella pneumophila str. Paris	59.524	87.5	0.521
comP	Acinetobacter baylyi ADP1	62.5	83.333	0.521
pilA/pilAI	Pseudomonas stutzeri DSM 10701	65.789	79.167	0.521
pilA/pilAII	Pseudomonas stutzeri DSM 10701	64.865	77.083	0.5
pilA	Ralstonia pseudosolanacearum GMI1000	55.814	89.583	0.5
pilA	Pseudomonas aeruginosa PAK	60	83.333	0.5
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	65.714	72.917	0.479
pilA	Vibrio cholerae C6706	65.714	72.917	0.479
pilA	Vibrio cholerae strain A1552	65.714	72.917	0.479
pilE	Neisseria gonorrhoeae MS11	47.826	95.833	0.458
pilE	Neisseria gonorrhoeae strain FA1090	47.826	95.833	0.458
pilA	Haemophilus influenzae 86-028NP	56.41	81.25	0.458
pilA	Haemophilus influenzae Rd KW20	56.41	81.25	0.458
pilA	Vibrio parahaemolyticus RIMD 2210633	52.5	83.333	0.438
pilA	Glaesserella parasuis strain SC1401	53.846	81.25	0.437
pilA	Vibrio campbellii strain DS40M4	55.263	79.167	0.437
pilE	Acinetobacter baumannii D1279779	71.429	58.333	0.417
comF	Acinetobacter baylyi ADP1	71.429	58.333	0.417
pilX	Neisseria meningitidis 8013	50	79.167	0.396
pilL	Neisseria gonorrhoeae MS11	50	79.167	0.396
pilY2	Acinetobacter baumannii D1279779	50	75	0.375
comP	Neisseria subflava NJ9703	37.5	100	0.375
pilV	Pseudomonas aeruginosa PAK	40.909	91.667	0.375
comP	Neisseria meningitidis 8013	52.941	70.833	0.375
comP	Neisseria gonorrhoeae MS11	52.941	70.833	0.375