MGE detailed information
MGE type: Integron MGE length: 89805 bp
Accession: NZ_CP046841 Location: 322432..412236 Organism: Vibrio cholerae strain F9993 Replicon: chromosome
Accession: NZ_CP046841 Location: 322432..412236 Organism: Vibrio cholerae strain F9993 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY07_RS15690 () | 317991..320768 | - | 2778 | WP_000509635.1 | alkaline phosphatase family protein | - |
| GPY07_RS15710 () | 322919..323332 | - | 414 | WP_000049420.1 | VOC family protein | - |
| GPY07_RS15715 () | 323516..324031 | - | 516 | WP_000343779.1 | dTDP-fucosamine acetyltransferase | VF |
| GPY07_RS15720 () | 324225..324509 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GPY07_RS15725 () | 324506..324784 | + | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| GPY07_RS15730 () | 324923..325318 | - | 396 | WP_001000867.1 | hypothetical protein | - |
| GPY07_RS15740 () | 325569..325694 | - | 126 | WP_001905700.1 | DUF645 family protein | - |
| GPY07_RS15745 () | 325993..326514 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| GPY07_RS15750 () | 326508..326777 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| GPY07_RS15755 () | 326808..326912 | - | 105 | WP_099607150.1 | acetyltransferase | Antitoxin Detail |
| GPY07_RS15760 () | 326969..327568 | - | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| GPY07_RS15765 () | 327718..328590 | - | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| GPY07_RS15770 () | 328765..328983 | - | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| GPY07_RS15775 () | 329047..329484 | - | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| GPY07_RS15780 () | 329603..329812 | - | 210 | Protein_290 | GNAT family N-acetyltransferase | - |
| GPY07_RS15785 () | 329948..330337 | - | 390 | WP_001081302.1 | hypothetical protein | - |
| GPY07_RS15790 () | 330494..331411 | - | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| GPY07_RS15795 () | 331645..331947 | - | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS15800 () | 331935..332192 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY07_RS15810 () | 332394..332927 | - | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GPY07_RS19430 () | 332924..333349 | - | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GPY07_RS15820 () | 333416..333787 | - | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| GPY07_RS15825 () | 333928..334215 | - | 288 | WP_000426470.1 | hypothetical protein | - |
| GPY07_RS15830 () | 334367..335035 | - | 669 | WP_000043871.1 | hypothetical protein | - |
| GPY07_RS15835 () | 335266..335538 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GPY07_RS15840 () | 335535..336032 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GPY07_RS15850 () | 336234..336386 | - | 153 | WP_001884520.1 | DUF645 family protein | - |
| GPY07_RS15855 () | 336708..337163 | - | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| GPY07_RS15860 () | 337291..337578 | - | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS15865 () | 337568..337819 | - | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY07_RS15870 () | 338033..338446 | - | 414 | WP_000049417.1 | VOC family protein | - |
| GPY07_RS15875 () | 338521..338664 | - | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| GPY07_RS15880 () | 338634..339035 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| GPY07_RS15885 () | 339035..339727 | - | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| GPY07_RS15890 () | 339864..340170 | - | 307 | Protein_310 | Streptogramin A acetyltransferase | VF |
| GPY07_RS15895 () | 340238..341218 | + | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| GPY07_RS15900 () | 341343..341498 | - | 156 | WP_000751734.1 | hypothetical protein | - |
| GPY07_RS15905 () | 341666..342100 | - | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| GPY07_RS15910 () | 342237..342551 | - | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| GPY07_RS15915 () | 342538..342870 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS15925 () | 343211..343438 | - | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| GPY07_RS15930 () | 343387..343500 | - | 114 | WP_001889158.1 | hypothetical protein | - |
| GPY07_RS15940 () | 343666..343947 | - | 282 | WP_001894453.1 | DUF1289 domain-containing protein | - |
| GPY07_RS19435 () | 343896..344010 | - | 115 | Protein_319 | acetyltransferase | - |
| GPY07_RS15945 () | 344067..344444 | - | 378 | WP_000411109.1 | hypothetical protein | - |
| GPY07_RS15950 () | 344615..344857 | - | 243 | WP_000107461.1 | hypothetical protein | - |
| GPY07_RS15955 () | 345059..345445 | - | 387 | WP_000703163.1 | VOC family protein | - |
| GPY07_RS15960 () | 345654..345825 | - | 172 | Protein_323 | DUF645 family protein | - |
| GPY07_RS15965 () | 346143..346412 | - | 270 | WP_001198131.1 | hypothetical protein | - |
| GPY07_RS15970 () | 346772..346945 | - | 174 | WP_001882305.1 | DUF3709 domain-containing protein | - |
| GPY07_RS19440 () | 347226..347429 | - | 204 | WP_001911745.1 | hypothetical protein | - |
| GPY07_RS15985 () | 347716..348267 | - | 552 | WP_000821930.1 | hypothetical protein | - |
| GPY07_RS15990 () | 348423..349280 | - | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| GPY07_RS15995 () | 349427..350041 | - | 615 | WP_000789575.1 | hypothetical protein | - |
| GPY07_RS16000 () | 350364..350534 | - | 171 | WP_001882300.1 | DUF645 family protein | - |
| GPY07_RS16005 () | 350838..351416 | - | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| GPY07_RS16010 () | 351667..352652 | + | 986 | Protein_332 | Sulfate-binding protein | VF |
| GPY07_RS16015 () | 353035..353499 | + | 465 | WP_000140244.1 | hypothetical protein | - |
| GPY07_RS16020 () | 353599..353997 | - | 399 | WP_001882293.1 | hypothetical protein | - |
| GPY07_RS16025 () | 354153..354653 | - | 501 | WP_000789723.1 | hypothetical protein | - |
| GPY07_RS16030 () | 354791..355321 | - | 531 | WP_000415563.1 | hypothetical protein | - |
| GPY07_RS16035 () | 355472..355867 | - | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| GPY07_RS16040 () | 356075..356500 | - | 426 | WP_000415748.1 | hypothetical protein | - |
| GPY07_RS16045 () | 356772..357425 | - | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| GPY07_RS16060 () | 357996..358244 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY07_RS16065 () | 358234..358524 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS16070 () | 358660..359175 | - | 516 | WP_001201528.1 | lipocalin family protein | - |
| GPY07_RS16075 () | 359312..359788 | - | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| GPY07_RS16080 () | 359816..359926 | - | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16085 () | 359923..360852 | - | 930 | WP_000335802.1 | hypothetical protein | - |
| GPY07_RS16090 () | 360972..361418 | - | 447 | WP_000128977.1 | hypothetical protein | - |
| GPY07_RS16095 () | 361571..362575 | - | 1005 | WP_000964925.1 | LD-carboxypeptidase | - |
| GPY07_RS16100 () | 362788..362826 | - | 39 | WP_106019119.1 | hypothetical protein | - |
| GPY07_RS16105 () | 362842..362967 | - | 126 | WP_001944767.1 | DUF645 family protein | - |
| GPY07_RS19445 () | 363144..363254 | - | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16115 () | 363251..363568 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| GPY07_RS16120 () | 363579..363866 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS16125 () | 364133..364313 | - | 181 | Protein_353 | DUF645 family protein | - |
| GPY07_RS16130 () | 364738..364971 | - | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| GPY07_RS16135 () | 365374..365592 | - | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| GPY07_RS16140 () | 365902..366555 | - | 654 | WP_000226874.1 | hypothetical protein | - |
| GPY07_RS16145 () | 366612..367121 | - | 510 | WP_000405987.1 | GNAT family N-acetyltransferase | - |
| GPY07_RS16150 () | 367363..367605 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY07_RS16155 () | 367624..367941 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS19450 () | 368135..368230 | - | 96 | WP_001907607.1 | DUF645 family protein | - |
| GPY07_RS16165 () | 368586..368879 | - | 294 | WP_125460920.1 | hypothetical protein | - |
| GPY07_RS16175 () | 369026..369373 | - | 348 | WP_000933409.1 | hypothetical protein | - |
| GPY07_RS16180 () | 369522..369947 | - | 426 | WP_000403014.1 | GNAT family N-acetyltransferase | - |
| GPY07_RS16185 () | 370143..370322 | - | 180 | WP_001883039.1 | DUF645 family protein | - |
| GPY07_RS16190 () | 370619..371155 | - | 537 | WP_000644491.1 | nucleotidyltransferase family protein | - |
| GPY07_RS16195 () | 371299..371694 | - | 396 | WP_000046953.1 | hypothetical protein | - |
| GPY07_RS16200 () | 371871..372052 | - | 182 | Protein_367 | DUF645 family protein | - |
| GPY07_RS16205 () | 372355..372750 | - | 396 | WP_000046952.1 | hypothetical protein | - |
| GPY07_RS16210 () | 373003..373281 | - | 279 | WP_000280319.1 | DUF3709 domain-containing protein | - |
| GPY07_RS16215 () | 373399..373509 | - | 111 | Protein_370 | DUF3265 domain-containing protein | - |
| GPY07_RS16220 () | 373506..374513 | - | 1008 | WP_000093800.1 | DUF4365 domain-containing protein | - |
| GPY07_RS16225 () | 374931..376108 | + | 1178 | WP_086010879.1 | IS3 family transposase ISVch4 | Transposase |
| GPY07_RS16230 () | 376105..376800 | + | 696 | WP_000213836.1 | hypothetical protein | - |
| GPY07_RS16235 () | 376861..377367 | - | 507 | WP_001921103.1 | hypothetical protein | - |
| GPY07_RS16240 () | 377408..378430 | - | 1023 | WP_000954291.1 | hypothetical protein | - |
| GPY07_RS16245 () | 378542..378682 | - | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16250 () | 378648..379583 | - | 936 | WP_000051985.1 | restriction endonuclease | - |
| GPY07_RS16255 () | 379864..380463 | - | 600 | WP_000429495.1 | hypothetical protein | - |
| GPY07_RS16260 () | 380618..380884 | - | 267 | WP_000937852.1 | hypothetical protein | - |
| GPY07_RS16265 () | 381098..381781 | - | 684 | WP_000877436.1 | hypothetical protein | - |
| GPY07_RS16275 () | 382205..382297 | - | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16280 () | 382319..382897 | - | 579 | WP_000110120.1 | hypothetical protein | - |
| GPY07_RS16290 () | 383126..383368 | + | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GPY07_RS16295 () | 383365..383664 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS16300 () | 383792..384187 | - | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| GPY07_RS16305 () | 384401..384580 | - | 180 | WP_001883058.1 | DUF645 family protein | - |
| GPY07_RS16315 () | 385158..385268 | - | 111 | WP_079857360.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16320 () | 385278..385976 | - | 699 | WP_001890502.1 | hypothetical protein | - |
| GPY07_RS16325 () | 386099..386725 | - | 627 | WP_000365424.1 | LysE family translocator | - |
| GPY07_RS16330 () | 386767..386859 | - | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16335 () | 386874..387347 | - | 474 | WP_001161076.1 | GrpB family protein | - |
| GPY07_RS16340 () | 387547..387729 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| GPY07_RS19455 () | 387790..387918 | - | 129 | WP_071908338.1 | general secretion pathway protein GspI | - |
| GPY07_RS16345 () | 388021..388815 | - | 795 | WP_001911581.1 | hypothetical protein | - |
| GPY07_RS16350 () | 388911..389156 | - | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| GPY07_RS16355 () | 389143..389409 | - | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| GPY07_RS16360 () | 389594..390256 | - | 663 | WP_000960654.1 | hypothetical protein | - |
| GPY07_RS16365 () | 390384..390851 | - | 468 | WP_001289288.1 | OsmC family protein | - |
| GPY07_RS19460 () | 391063..391101 | - | 39 | WP_082798268.1 | hypothetical protein | - |
| GPY07_RS19465 () | 391155..391298 | - | 144 | Protein_400 | DUF645 family protein | - |
| GPY07_RS16375 () | 391673..391951 | - | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| GPY07_RS16380 () | 392203..392445 | - | 243 | WP_000107461.1 | hypothetical protein | - |
| GPY07_RS16385 () | 392537..392686 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16390 () | 392659..392910 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| GPY07_RS16395 () | 393105..393491 | - | 387 | WP_000703163.1 | VOC family protein | - |
| GPY07_RS16400 () | 393481..393582 | - | 102 | WP_001921603.1 | hypothetical protein | - |
| GPY07_RS16405 () | 393782..393988 | - | 207 | Protein_407 | DUF3709 domain-containing protein | - |
| GPY07_RS16410 () | 394240..394518 | - | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| GPY07_RS16415 () | 394804..395082 | + | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GPY07_RS16420 () | 395075..395344 | + | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| GPY07_RS16425 () | 395492..395938 | - | 447 | WP_000006157.1 | hypothetical protein | - |
| GPY07_RS16435 () | 396134..396172 | - | 39 | WP_106019118.1 | hypothetical protein | - |
| GPY07_RS16440 () | 396188..396313 | - | 126 | WP_001900195.1 | DUF645 family protein | - |
| GPY07_RS16445 () | 396706..396978 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GPY07_RS16450 () | 396975..397472 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GPY07_RS16455 () | 397622..398137 | - | 516 | WP_001201509.1 | lipocalin family protein | - |
| GPY07_RS16460 () | 398274..398810 | - | 537 | WP_000469482.1 | GNAT family N-acetyltransferase | - |
| GPY07_RS16470 () | 399068..399349 | - | 282 | WP_001894429.1 | DUF1289 domain-containing protein | - |
| GPY07_RS16475 () | 399298..399411 | - | 114 | WP_001900214.1 | hypothetical protein | - |
| GPY07_RS16480 () | 399468..399854 | - | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| GPY07_RS16485 () | 400098..400340 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY07_RS16490 () | 400359..400676 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY07_RS16500 () | 400830..401168 | - | 339 | WP_000713853.1 | hypothetical protein | - |
| GPY07_RS16505 () | 401326..402030 | - | 705 | WP_000087610.1 | HNH endonuclease | - |
| GPY07_RS16510 () | 402192..403400 | - | 1209 | WP_000272282.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| GPY07_RS16515 () | 403562..404239 | - | 678 | WP_000254617.1 | HNH endonuclease | - |
| GPY07_RS16520 () | 404434..404616 | - | 183 | WP_000923153.1 | DUF645 family protein | - |
| GPY07_RS16525 () | 404970..405152 | - | 183 | WP_000923340.1 | DUF645 family protein | - |
| GPY07_RS16530 () | 405448..405825 | - | 378 | WP_000411106.1 | hypothetical protein | - |
| GPY07_RS16535 () | 406030..406212 | - | 183 | WP_000923334.1 | DUF645 family protein | - |
| GPY07_RS16540 () | 406237..406416 | - | 180 | WP_001203705.1 | hypothetical protein | - |
| GPY07_RS16545 () | 406514..407266 | - | 753 | WP_000116045.1 | putative oxidoreductase YgfF | VF |
| GPY07_RS16555 () | 407422..408051 | - | 630 | WP_001009012.1 | Chloramphenicol acetyltransferase | VF |
| GPY07_RS16560 () | 408202..408633 | - | 432 | WP_000795498.1 | hypothetical protein | - |
| GPY07_RS16565 () | 408664..408813 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16570 () | 408786..409037 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| GPY07_RS16575 () | 409293..409475 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| GPY07_RS19470 () | 410139..410228 | - | 90 | WP_072615218.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16590 () | 410246..410598 | - | 353 | Protein_439 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| GPY07_RS16595 () | 410627..410794 | - | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| GPY07_RS16600 () | 411274..412236 | + | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| GPY07_RS16605 () | 412318..412671 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| GPY07_RS16610 () | 412713..412907 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| GPY07_RS16615 () | 413011..413562 | - | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| GPY07_RS16620 () | 413566..415494 | - | 1929 | WP_001121779.1 | threonine--tRNA ligase | - |
| GPY07_RS19475 () | 415763..415990 | - | 228 | WP_001911595.1 | hypothetical protein | - |
| GPY07_RS16630 () | 416115..416786 | - | 672 | WP_000132861.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Vibrio cholerae O1 biovar El Tor str. N16961 | Integron | TA164, TA169, TA166, TA167, TA179, TA170, TA171, TA172, TA173, TA174, TA175, TA176, TA177, TA178, TA168, TA165, TA10030, TA10035 | NC_002506 | 309750..435387 | 0.005 |