MGE detailed information
MGE type: Integron MGE length: 89809 bp
Accession: NZ_LT992493 Location: 202848..292656 Organism: Vibrio cholerae strain 4295STDY6534248 Replicon: chromosome
Accession: NZ_LT992493 Location: 202848..292656 Organism: Vibrio cholerae strain 4295STDY6534248 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DG169_RS15225 () | 198298..198969 | + | 672 | WP_000132861.1 | hypothetical protein | - |
| DG169_RS19750 () | 199094..199321 | + | 228 | WP_001911595.1 | hypothetical protein | - |
| DG169_RS15235 () | 199590..201518 | + | 1929 | WP_001121779.1 | threonine--tRNA ligase | - |
| DG169_RS15240 () | 201522..202073 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| DG169_RS15245 () | 202177..202371 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| DG169_RS15250 () | 202413..202766 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| DG169_RS15255 () | 202848..203810 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| DG169_RS15265 () | 204290..204457 | + | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| DG169_RS15270 () | 204486..204812 | + | 327 | WP_001921550.1 | hypothetical protein | - |
| DG169_RS19895 () | 204856..204945 | + | 90 | WP_072615218.1 | DUF3265 domain-containing protein | - |
| DG169_RS15290 () | 205609..205791 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| DG169_RS15295 () | 206047..206298 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| DG169_RS15300 () | 206271..206420 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| DG169_RS15305 () | 206451..206882 | + | 432 | WP_000795498.1 | hypothetical protein | - |
| DG169_RS15315 () | 207033..207662 | + | 630 | WP_001009012.1 | Chloramphenicol acetyltransferase | VF |
| DG169_RS15325 () | 207818..208570 | + | 753 | WP_000116045.1 | putative oxidoreductase YgfF | VF |
| DG169_RS15330 () | 208668..208847 | + | 180 | WP_001203705.1 | hypothetical protein | - |
| DG169_RS15335 () | 208872..209054 | + | 183 | WP_000923334.1 | DUF645 family protein | - |
| DG169_RS15340 () | 209259..209636 | + | 378 | WP_000411106.1 | hypothetical protein | - |
| DG169_RS15345 () | 209932..210114 | + | 183 | WP_000923340.1 | DUF645 family protein | - |
| DG169_RS15350 () | 210468..210650 | + | 183 | WP_000923153.1 | DUF645 family protein | - |
| DG169_RS15360 () | 210845..211522 | + | 678 | WP_000254617.1 | HNH endonuclease | - |
| DG169_RS15365 () | 211684..212892 | + | 1209 | WP_000272282.1 | deoxyguanosinetriphosphate triphosphohydrolase family protein | - |
| DG169_RS15370 () | 213054..213758 | + | 705 | WP_000087610.1 | HNH endonuclease | - |
| DG169_RS15375 () | 213916..214254 | + | 339 | WP_000713853.1 | hypothetical protein | - |
| DG169_RS15385 () | 214408..214725 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS15390 () | 214744..214986 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG169_RS15395 () | 215230..215616 | + | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| DG169_RS15400 () | 215673..215786 | + | 114 | WP_001900214.1 | hypothetical protein | - |
| DG169_RS15405 () | 215735..216016 | + | 282 | WP_001894429.1 | DUF1289 domain-containing protein | - |
| DG169_RS15420 () | 216274..216810 | + | 537 | WP_000469482.1 | GNAT family N-acetyltransferase | - |
| DG169_RS15425 () | 216947..217462 | + | 516 | WP_001201509.1 | lipocalin family protein | - |
| DG169_RS15430 () | 217612..218109 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DG169_RS15435 () | 218106..218378 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DG169_RS15440 () | 218771..218896 | + | 126 | WP_001900195.1 | DUF645 family protein | - |
| DG169_RS15445 () | 218912..218950 | + | 39 | WP_106019118.1 | hypothetical protein | - |
| DG169_RS15455 () | 219146..219592 | + | 447 | WP_000006157.1 | hypothetical protein | - |
| DG169_RS15460 () | 219740..220009 | - | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| DG169_RS15465 () | 220002..220280 | - | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DG169_RS15475 () | 220566..220844 | + | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| DG169_RS15480 () | 221096..221302 | + | 207 | Protein_208 | DUF3709 domain-containing protein | - |
| DG169_RS15485 () | 221502..221603 | + | 102 | WP_001921603.1 | hypothetical protein | - |
| DG169_RS15490 () | 221593..221979 | + | 387 | WP_000703163.1 | VOC family protein | - |
| DG169_RS15495 () | 222174..222425 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| DG169_RS15500 () | 222398..222547 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| DG169_RS15505 () | 222639..222881 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| DG169_RS15510 () | 223133..223411 | + | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| DG169_RS19815 () | 223786..223929 | + | 144 | Protein_215 | DUF645 family protein | - |
| DG169_RS19820 () | 223983..224021 | + | 39 | WP_082798268.1 | hypothetical protein | - |
| DG169_RS15525 () | 224233..224700 | + | 468 | WP_001289288.1 | OsmC family protein | - |
| DG169_RS15530 () | 224828..225490 | + | 663 | WP_000960654.1 | hypothetical protein | - |
| DG169_RS15540 () | 225675..225941 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| DG169_RS15545 () | 225928..226173 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| DG169_RS15550 () | 226269..227063 | + | 795 | WP_001911581.1 | hypothetical protein | - |
| DG169_RS19825 () | 227166..227294 | + | 129 | WP_071908338.1 | general secretion pathway protein GspI | - |
| DG169_RS15565 () | 227355..227537 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| DG169_RS15570 () | 227737..228210 | + | 474 | WP_001161076.1 | GrpB family protein | - |
| DG169_RS15575 () | 228225..228317 | + | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| DG169_RS15580 () | 228359..228985 | + | 627 | WP_000365424.1 | LysE family translocator | - |
| DG169_RS15585 () | 229108..229806 | + | 699 | WP_001890502.1 | hypothetical protein | - |
| DG169_RS15590 () | 229816..229926 | + | 111 | WP_079857360.1 | DUF3265 domain-containing protein | - |
| DG169_RS15605 () | 230504..230683 | + | 180 | WP_001883058.1 | DUF645 family protein | - |
| DG169_RS15610 () | 230897..231292 | + | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| DG169_RS15615 () | 231420..231719 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS15620 () | 231716..231958 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| DG169_RS15630 () | 232187..232765 | + | 579 | WP_000110120.1 | hypothetical protein | - |
| DG169_RS15635 () | 232787..232879 | + | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| DG169_RS15645 () | 233303..233986 | + | 684 | WP_000877436.1 | hypothetical protein | - |
| DG169_RS15655 () | 234200..234466 | + | 267 | WP_000937852.1 | hypothetical protein | - |
| DG169_RS15665 () | 234621..235220 | + | 600 | WP_000429495.1 | hypothetical protein | - |
| DG169_RS15670 () | 235501..236436 | + | 936 | WP_000051985.1 | restriction endonuclease | - |
| DG169_RS15675 () | 236402..236542 | + | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| DG169_RS15680 () | 236654..237676 | + | 1023 | WP_000954291.1 | hypothetical protein | - |
| DG169_RS15685 () | 237717..238223 | + | 507 | WP_001921103.1 | hypothetical protein | - |
| DG169_RS15690 () | 238284..238979 | - | 696 | WP_000213836.1 | hypothetical protein | - |
| DG169_RS15705 () | 240571..241578 | + | 1008 | WP_000093800.1 | DUF4365 domain-containing protein | - |
| DG169_RS15710 () | 241575..241685 | + | 111 | Protein_245 | DUF3265 domain-containing protein | - |
| DG169_RS15715 () | 241803..242081 | + | 279 | WP_000280319.1 | DUF3709 domain-containing protein | - |
| DG169_RS15720 () | 242334..242729 | + | 396 | WP_000046952.1 | hypothetical protein | - |
| DG169_RS15725 () | 243032..243213 | + | 182 | Protein_248 | DUF645 family protein | - |
| DG169_RS15730 () | 243390..243785 | + | 396 | WP_000046953.1 | hypothetical protein | - |
| DG169_RS15735 () | 243929..244465 | + | 537 | WP_000644491.1 | nucleotidyltransferase family protein | - |
| DG169_RS15740 () | 244762..244941 | + | 180 | WP_001883039.1 | DUF645 family protein | - |
| DG169_RS15745 () | 245137..245562 | + | 426 | WP_000403014.1 | GNAT family N-acetyltransferase | - |
| DG169_RS15750 () | 245711..246058 | + | 348 | WP_000933409.1 | hypothetical protein | - |
| DG169_RS19680 () | 246205..246498 | + | 294 | WP_125460920.1 | hypothetical protein | - |
| DG169_RS19830 () | 246854..246949 | + | 96 | WP_001907607.1 | DUF645 family protein | - |
| DG169_RS15770 () | 247143..247460 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS15775 () | 247479..247721 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG169_RS15780 () | 247963..248472 | + | 510 | WP_000405987.1 | GNAT family N-acetyltransferase | - |
| DG169_RS15785 () | 248529..249182 | + | 654 | WP_000226874.1 | hypothetical protein | - |
| DG169_RS15790 () | 249492..249710 | + | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| DG169_RS15795 () | 250113..250346 | + | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| DG169_RS15800 () | 250771..250951 | + | 181 | Protein_262 | DUF645 family protein | - |
| DG169_RS15810 () | 251218..251505 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS15815 () | 251516..251833 | + | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DG169_RS19835 () | 251830..251940 | + | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| DG169_RS19840 () | 252117..252242 | + | 126 | WP_001944767.1 | DUF645 family protein | - |
| DG169_RS19845 () | 252258..252296 | + | 39 | WP_106019119.1 | hypothetical protein | - |
| DG169_RS15840 () | 252509..253513 | + | 1005 | WP_000964925.1 | LD-carboxypeptidase | - |
| DG169_RS15845 () | 253666..254112 | + | 447 | WP_000128977.1 | hypothetical protein | - |
| DG169_RS15850 () | 254232..255161 | + | 930 | WP_000335802.1 | hypothetical protein | - |
| DG169_RS15855 () | 255158..255268 | + | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| DG169_RS15860 () | 255296..255772 | + | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| DG169_RS15865 () | 255909..256424 | + | 516 | WP_001201528.1 | lipocalin family protein | - |
| DG169_RS15870 () | 256560..256850 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS15875 () | 256840..257088 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG169_RS15890 () | 257659..258312 | + | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| DG169_RS15895 () | 258584..259009 | + | 426 | WP_000415748.1 | hypothetical protein | - |
| DG169_RS15900 () | 259217..259612 | + | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| DG169_RS15905 () | 259763..260293 | + | 531 | WP_000415563.1 | hypothetical protein | - |
| DG169_RS15910 () | 260431..260931 | + | 501 | WP_000789723.1 | hypothetical protein | - |
| DG169_RS15920 () | 261087..261489 | + | 403 | Protein_281 | hypothetical protein | - |
| DG169_RS15925 () | 261589..262053 | - | 465 | WP_000140244.1 | hypothetical protein | - |
| DG169_RS15930 () | 262436..263421 | - | 986 | Protein_283 | Sulfate-binding protein | VF |
| DG169_RS15935 () | 263672..264250 | + | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| DG169_RS15945 () | 264554..264724 | + | 171 | WP_001882300.1 | DUF645 family protein | - |
| DG169_RS15950 () | 265047..265661 | + | 615 | WP_000789575.1 | hypothetical protein | - |
| DG169_RS15955 () | 265808..266665 | + | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| DG169_RS15960 () | 266821..267372 | + | 552 | WP_000821930.1 | hypothetical protein | - |
| DG169_RS19760 () | 267659..267862 | + | 204 | WP_001911745.1 | hypothetical protein | - |
| DG169_RS15975 () | 268143..268316 | + | 174 | WP_001882305.1 | DUF3709 domain-containing protein | - |
| DG169_RS15980 () | 268676..268945 | + | 270 | WP_001198131.1 | hypothetical protein | - |
| DG169_RS19900 () | 269263..269434 | + | 172 | Protein_292 | DUF645 family protein | - |
| DG169_RS15995 () | 269643..270029 | + | 387 | WP_000703163.1 | VOC family protein | - |
| DG169_RS16000 () | 270231..270473 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| DG169_RS16005 () | 270644..271021 | + | 378 | WP_000411109.1 | hypothetical protein | - |
| DG169_RS19860 () | 271078..271192 | + | 115 | Protein_296 | acetyltransferase | - |
| DG169_RS16010 () | 271141..271422 | + | 282 | WP_001894453.1 | DUF1289 domain-containing protein | - |
| DG169_RS16025 () | 271588..271701 | + | 114 | WP_001889158.1 | hypothetical protein | - |
| DG169_RS16030 () | 271650..271877 | + | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| DG169_RS16045 () | 272218..272550 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS16050 () | 272537..272851 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| DG169_RS16055 () | 272988..273422 | + | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| DG169_RS19685 () | 273590..273745 | + | 156 | WP_000751734.1 | hypothetical protein | - |
| DG169_RS16060 () | 273870..274850 | - | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| DG169_RS16065 () | 274918..275224 | + | 307 | Protein_305 | Streptogramin A acetyltransferase | VF |
| DG169_RS16070 () | 275361..276053 | + | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| DG169_RS16075 () | 276053..276454 | + | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DG169_RS16080 () | 276424..276567 | + | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| DG169_RS16085 () | 276642..277055 | + | 414 | WP_000049417.1 | VOC family protein | - |
| DG169_RS16090 () | 277269..277520 | + | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG169_RS16095 () | 277510..277797 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS16100 () | 277925..278380 | + | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| DG169_RS16105 () | 278702..278854 | + | 153 | WP_001884520.1 | DUF645 family protein | - |
| DG169_RS16115 () | 279056..279553 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DG169_RS16120 () | 279550..279822 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DG169_RS16125 () | 280053..280721 | + | 669 | WP_000043871.1 | hypothetical protein | - |
| DG169_RS16130 () | 280873..281160 | + | 288 | WP_000426470.1 | hypothetical protein | - |
| DG169_RS16135 () | 281301..281672 | + | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| DG169_RS16140 () | 281739..282164 | + | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DG169_RS16145 () | 282161..282694 | + | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DG169_RS16155 () | 282896..283153 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DG169_RS16160 () | 283141..283443 | + | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DG169_RS16170 () | 283677..284594 | + | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| DG169_RS16175 () | 284751..285140 | + | 390 | WP_001081302.1 | hypothetical protein | - |
| DG169_RS16180 () | 285276..285485 | + | 210 | Protein_325 | GNAT family N-acetyltransferase | - |
| DG169_RS16185 () | 285604..286041 | + | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| DG169_RS16190 () | 286105..286323 | + | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| DG169_RS16195 () | 286498..287370 | + | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| DG169_RS16200 () | 287520..288119 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| DG169_RS16205 () | 288176..288280 | + | 105 | WP_099607150.1 | acetyltransferase | Antitoxin Detail |
| DG169_RS16210 () | 288311..288580 | + | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| DG169_RS16215 () | 288574..289095 | + | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| DG169_RS16220 () | 289394..289519 | + | 126 | WP_001905700.1 | DUF645 family protein | - |
| DG169_RS16230 () | 289770..290165 | + | 396 | WP_001000867.1 | hypothetical protein | - |
| DG169_RS16235 () | 290304..290582 | - | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| DG169_RS16240 () | 290579..290863 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DG169_RS16245 () | 291057..291572 | + | 516 | WP_000343779.1 | hypothetical protein | VF |
| DG169_RS16255 () | 291756..292169 | + | 414 | WP_000049420.1 | VOC family protein | - |
| DG169_RS16270 () | 292724..293901 | + | 1178 | WP_086010879.1 | IS3-like element ISVch4 family transposase | - |
| DG169_RS16275 () | 294320..297097 | + | 2778 | WP_000509635.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Vibrio cholerae O1 biovar El Tor str. N16961 | Integron | TA164, TA169, TA166, TA167, TA179, TA170, TA171, TA172, TA173, TA174, TA175, TA176, TA177, TA178, TA168, TA165, TA10030, TA10035 | NC_002506 | 309750..435387 | 0.005 |