Escherichia coli 042
Experimental investigation has been performed.
Bioinformatics investigation has been performed
T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
---|---|---|---|---|---|
T6SS00463 | i2 | Escherichia coli 042 | chromosome (NC_017626) | 4852875..4885437 | effector translocation |
T6SS00464 | i4b | Escherichia coli 042 | chromosome (NC_017626) | 4893076..4921378 | effector translocation |
T6SS00485 | i1 | Escherichia coli 042 | chromosome (NC_017626) | 243529..266516 | - |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
---|---|---|---|---|---|---|---|---|
EFF01465 | EC042_RS24220 | Tle | IMU00313 | T6SS00931 | Escherichia coli 042 | chromosome (NC_017626) | 4865605..4867287 (+) | 284924255 |
EFF00560 | EC042_RS24195 | - | - | T6SS00463 | Escherichia coli 042 | chromosome (NC_017626) | 4858680..4859171 (+) | 387609950 |
EFF00561 | EC042_4564 (AaiC) | - | - | T6SS00464 | Escherichia coli 042 | chromosome (NC_017626) | 4895043..4895549 (+) | 387609980 |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
---|---|---|---|---|---|---|---|
IMU00313 | EC042_4535 (Tli1EAEC) | T6SS00463 | Escherichia coli 042 | chromosome (NC_017626) | 4867307..4867984 (+) | 446118504 | EFF00561 |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed