Detailed information NTG0680431

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: M0M42_RS21130
• Genome accession: NZ_CP096208
• Coordinates: 3536043..3536228 (+)
• Length: 61 a.a.
• NCBI ID: WP_282579612.1
• Uniprot ID: -
• Organism: Pseudomonas knackmussii strain B09-2
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3531043..3541228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M0M42_RS16495 (M0M42_16495)	pilD	3531772..3532635 (-)	864	WP_248493403.1	A24 family peptidase	Machinery gene
M0M42_RS16500 (M0M42_16500)	pilC	3532638..3533861 (-)	1224	WP_248493405.1	type II secretion system F family protein	Machinery gene
M0M42_RS16505 (M0M42_16505)	pilB	3533864..3535570 (-)	1707	WP_248493407.1	type IV-A pilus assembly ATPase PilB	Machinery gene
M0M42_RS21130	pilA	3536043..3536228 (+)	186	WP_282579612.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
M0M42_RS16515 (M0M42_16515)	-	3536241..3536654 (+)	414	WP_248493410.1	hypothetical protein	-
M0M42_RS16520 (M0M42_16520)	-	3536724..3537527 (+)	804	WP_248493412.1	ABC transporter permease subunit	-
M0M42_RS16525 (M0M42_16525)	-	3537524..3538357 (+)	834	WP_248493414.1	hypothetical protein	-
M0M42_RS16530 (M0M42_16530)	-	3538344..3539231 (+)	888	WP_248493416.1	ABC transporter ATP-binding protein	-
M0M42_RS16535 (M0M42_16535)	-	3539838..3540278 (+)	441	WP_248493417.1	YtoQ family protein	-

Sequence

Protein

• Length: 61 a.a.
• Molecular weight: 6609.79 Da
• Isoelectric Point: 10.1002

>NTDB_id=680431 M0M42_RS21130 WP_282579612.1 3536043..3536228(+) (pilA) [Pseudomonas knackmussii strain B09-2]
MKSIKKQKGFTLIELMIVVAIIGILAAIAIPQFQEYQAKGYDKSAQSDARNLLTAGIANSQ

Nucleotide

• Length: 186 bp

>NTDB_id=680431 M0M42_RS21130 WP_282579612.1 3536043..3536228(+) (pilA) [Pseudomonas knackmussii strain B09-2]
ATGAAGTCCATCAAGAAGCAAAAGGGTTTTACCCTGATCGAACTGATGATCGTGGTTGCGATTATCGGCATTCTGGCTGC
GATCGCGATTCCTCAGTTTCAGGAATATCAGGCCAAAGGCTATGACAAGTCGGCCCAATCCGACGCTCGCAACCTTTTGA
CCGCCGGCATTGCGAACTCACAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Ralstonia pseudosolanacearum GMI1000	52.113	100	0.607
pilA	Pseudomonas aeruginosa PAK	66.667	83.607	0.557
pilA	Acinetobacter baumannii strain A118	67.347	80.328	0.541
pilA	Acinetobacter nosocomialis M2	87.879	54.098	0.475
pilA	Vibrio parahaemolyticus RIMD 2210633	58	81.967	0.475
pilA/pilAII	Pseudomonas stutzeri DSM 10701	60.87	75.41	0.459
pilA	Vibrio campbellii strain DS40M4	77.778	59.016	0.459
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	54.902	83.607	0.459
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	80	57.377	0.459
pilA	Vibrio cholerae strain A1552	80	57.377	0.459
pilA	Vibrio cholerae C6706	80	57.377	0.459
pilA2	Legionella pneumophila str. Paris	87.097	50.82	0.443
pilA2	Legionella pneumophila strain ERS1305867	87.097	50.82	0.443
pilA/pilA1	Eikenella corrodens VA1	77.143	57.377	0.443
pilE	Acinetobacter baumannii D1279779	56.522	75.41	0.426
comF	Acinetobacter baylyi ADP1	57.778	73.77	0.426
pilA/pilAI	Pseudomonas stutzeri DSM 10701	78.788	54.098	0.426
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	75.758	54.098	0.41
pilL	Neisseria gonorrhoeae MS11	69.444	59.016	0.41
pilX	Neisseria meningitidis 8013	69.444	59.016	0.41
pilA	Haemophilus influenzae Rd KW20	72.727	54.098	0.393
pilE	Neisseria gonorrhoeae strain FA1090	72.727	54.098	0.393
pilE	Neisseria gonorrhoeae MS11	72.727	54.098	0.393
pilA	Haemophilus influenzae 86-028NP	72.727	54.098	0.393
pilH	Neisseria gonorrhoeae MS11	44.898	80.328	0.361
pilA	Glaesserella parasuis strain SC1401	68.75	52.459	0.361
comE	Acinetobacter baylyi ADP1	68.75	52.459	0.361