Detailed information NTG0035147

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CAP2UW1_RS06635
• Genome accession: NC_013194
• Coordinates: 1507720..1507905 (+)
• Length: 61 a.a.
• NCBI ID: WP_015765886.1
• Uniprot ID: A0A9D8KUC6
• Organism: Candidatus Accumulibacter phosphatis
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1502720..1512905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAP2UW1_RS06615 (CAP2UW1_1325)	-	1503994..1504491 (-)	498	WP_015765882.1	hypothetical protein	-
CAP2UW1_RS06620 (CAP2UW1_1326)	-	1504722..1505171 (-)	450	WP_015765883.1	DUF29 domain-containing protein	-
CAP2UW1_RS23590 (CAP2UW1_1327)	-	1505276..1506847 (-)	1572	WP_015765884.1	hydrogenase iron-sulfur subunit	-
CAP2UW1_RS06630 (CAP2UW1_1328)	-	1507114..1507326 (+)	213	WP_291933855.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
CAP2UW1_RS06635 (CAP2UW1_1329)	pilA	1507720..1507905 (+)	186	WP_015765886.1	type IV pilin protein	Machinery gene
CAP2UW1_RS25355 (CAP2UW1_1330)	-	1507933..1508322 (+)	390	WP_015765887.1	hypothetical protein	-
CAP2UW1_RS06645 (CAP2UW1_1331)	-	1508388..1509191 (+)	804	WP_015765888.1	ABC transporter permease	-
CAP2UW1_RS06650 (CAP2UW1_1332)	-	1509193..1510044 (+)	852	WP_015765889.1	hypothetical protein	-
CAP2UW1_RS06655 (CAP2UW1_1333)	-	1510041..1510952 (+)	912	WP_015765890.1	ABC transporter ATP-binding protein	-
CAP2UW1_RS06660 (CAP2UW1_1334)	-	1511073..1512203 (-)	1131	WP_015765891.1	phosphatase PAP2 family protein	-

Sequence

Protein

• Length: 61 a.a.
• Molecular weight: 6576.72 Da
• Isoelectric Point: 8.6385

>NTDB_id=35147 CAP2UW1_RS06635 WP_015765886.1 1507720..1507905(+) (pilA) [Candidatus Accumulibacter phosphatis]
MKKLQKGFTLIELMIVVAIIGILAAIAIPQFSDYTRKGEDKAAQSDARNILTSAVVNSSPE

Nucleotide

• Length: 186 bp

>NTDB_id=35147 CAP2UW1_RS06635 WP_015765886.1 1507720..1507905(+) (pilA) [Candidatus Accumulibacter phosphatis]
ATGAAGAAGCTGCAGAAAGGCTTTACCCTGATCGAACTGATGATCGTTGTGGCCATCATCGGTATTCTGGCCGCGATCGC
CATTCCCCAATTCTCTGACTACACGCGCAAAGGCGAGGATAAAGCGGCCCAGTCGGACGCGAGAAATATCCTGACCTCGG
CCGTCGTCAACTCGTCCCCAGAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (3-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Ralstonia pseudosolanacearum GMI1000	64.706	83.607	0.541
comP	Acinetobacter baylyi ADP1	56.14	93.443	0.525
pilA	Acinetobacter nosocomialis M2	58.491	86.885	0.508
pilA	Acinetobacter baumannii strain A118	64.583	78.689	0.508
pilA	Pseudomonas aeruginosa PAK	73.171	67.213	0.492
pilA/pilAI	Pseudomonas stutzeri DSM 10701	70.732	67.213	0.475
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	54.717	86.885	0.475
pilE	Acinetobacter baumannii D1279779	61.702	77.049	0.475
pilA2	Legionella pneumophila strain ERS1305867	90.323	50.82	0.459
pilA2	Legionella pneumophila str. Paris	90.323	50.82	0.459
pilA	Vibrio campbellii strain DS40M4	75.676	60.656	0.459
pilA/pilA1	Eikenella corrodens VA1	71.795	63.934	0.459
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	80	57.377	0.459
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	77.143	57.377	0.443
pilA	Vibrio cholerae strain A1552	77.143	57.377	0.443
pilA	Vibrio cholerae C6706	77.143	57.377	0.443
pilA	Vibrio parahaemolyticus RIMD 2210633	50.943	86.885	0.443
pilE	Neisseria gonorrhoeae strain FA1090	66.667	63.934	0.426
pilE	Neisseria gonorrhoeae MS11	66.667	63.934	0.426
pilA	Haemophilus influenzae Rd KW20	67.568	60.656	0.41
pilA	Haemophilus influenzae 86-028NP	69.444	59.016	0.41
pilA	Glaesserella parasuis strain SC1401	64.865	60.656	0.393
comE	Acinetobacter baylyi ADP1	48	81.967	0.393
pilA/pilAII	Pseudomonas stutzeri DSM 10701	68.571	57.377	0.393
comF	Acinetobacter baylyi ADP1	71.875	52.459	0.377
pilL	Neisseria gonorrhoeae MS11	67.647	55.738	0.377
pilX	Neisseria meningitidis 8013	67.647	55.738	0.377
comYC	Streptococcus gordonii str. Challis substr. CH1	35.484	100	0.361
pilA/pilA1	Synechocystis sp. PCC 6803	50	72.131	0.361