Detailed information NTG1017664

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: ABX026_RS05025
• Genome accession: NZ_CP160075
• Coordinates: 1136246..1136359 (+)
• Length: 37 a.a.
• NCBI ID: WP_341463903.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Amel10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1131246..1141359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABX026_RS05010 (ABX026_16025)	-	1131941..1134169 (-)	2229	WP_371751263.1	FepA family TonB-dependent siderophore receptor	-
ABX026_RS05015 (ABX026_00570)	-	1134585..1135346 (+)	762	WP_371751264.1	hypothetical protein	-
ABX026_RS05020 (ABX026_16030)	-	1135633..1136082 (+)	450	WP_025331117.1	pilin	-
ABX026_RS05025 (ABX026_16035)	pilE	1136246..1136359 (+)	114	WP_341463903.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
ABX026_RS05030 (ABX026_16040)	-	1136846..1136963 (+)	118	Protein_960	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ABX026_RS05035 (ABX026_16045)	-	1136993..1137304 (+)	312	WP_371751332.1	pilin	-
ABX026_RS05040 (ABX026_00595)	-	1137828..1138817 (+)	990	WP_279035774.1	sulfatase-like hydrolase/transferase	-
ABX026_RS05045 (ABX026_00600)	waaA	1139004..1140293 (-)	1290	WP_371751265.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-

Sequence

Protein

• Length: 37 a.a.
• Molecular weight: 4330.43 Da
• Isoelectric Point: 10.0998

>NTDB_id=1017664 ABX026_RS05025 WP_341463903.1 1136246..1136359(+) (pilE) [Snodgrassella alvi strain Amel10]
MYWKKVFTFIELMIVIAVIGILVAIVLPAYKNYIVRT

Nucleotide

• Length: 114 bp

>NTDB_id=1017664 ABX026_RS05025 WP_341463903.1 1136246..1136359(+) (pilE) [Snodgrassella alvi strain Amel10]
ATCTATTGGAAAAAAGTCTTTACTTTTATTGAGTTAATGATCGTTATTGCTGTTATCGGGATACTGGTGGCTATAGTGCT
TCCTGCTTATAAAAATTATATAGTCAGAACATAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Acinetobacter baylyi ADP1	66.667	97.297	0.649
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	70.588	91.892	0.649
pilA/pilA1	Eikenella corrodens VA1	69.697	89.189	0.622
pilA/pilAI	Pseudomonas stutzeri DSM 10701	67.647	91.892	0.622
pilA	Acinetobacter nosocomialis M2	62.162	100	0.622
pilA/pilAII	Pseudomonas stutzeri DSM 10701	70.968	83.784	0.595
pilA	Acinetobacter baumannii strain A118	59.459	100	0.595
pilA	Pseudomonas aeruginosa PAK	59.459	100	0.595
pilE	Neisseria gonorrhoeae MS11	63.636	89.189	0.568
pilE	Neisseria gonorrhoeae strain FA1090	63.636	89.189	0.568
pilA	Ralstonia pseudosolanacearum GMI1000	63.636	89.189	0.568
pilA2	Legionella pneumophila strain ERS1305867	63.636	89.189	0.568
pilA2	Legionella pneumophila str. Paris	63.636	89.189	0.568
comF	Acinetobacter baylyi ADP1	66.667	81.081	0.541
pilA	Haemophilus influenzae 86-028NP	66.667	81.081	0.541
pilA	Haemophilus influenzae Rd KW20	66.667	81.081	0.541
pilA	Vibrio cholerae C6706	57.143	94.595	0.541
pilA	Vibrio cholerae strain A1552	57.143	94.595	0.541
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	57.143	94.595	0.541
pilA	Vibrio parahaemolyticus RIMD 2210633	61.29	83.784	0.514
pilA	Vibrio campbellii strain DS40M4	66.667	72.973	0.486
pilA	Glaesserella parasuis strain SC1401	62.069	78.378	0.486
comE	Acinetobacter baylyi ADP1	47.059	91.892	0.432
pilL	Neisseria gonorrhoeae MS11	48.485	89.189	0.432
pilX	Neisseria meningitidis 8013	51.613	83.784	0.432
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	68.182	59.459	0.405
pilY2	Acinetobacter baumannii D1279779	46.667	81.081	0.378
fimT	Acinetobacter baylyi ADP1	50	75.676	0.378