TA loci of Escherichia coli strain EC12
Number of TA loci:
0;
46
| TA ID | Related MGEs | Organism (replicon) | Genome accession | Toxin | Antitoxin | Family/Domain |
|---|---|---|---|---|---|---|
| GI | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS00220 (higB) | H9199_RS00215 (higA) | higBA (relBE)/HTH(antitoxin) | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS02450 (hicA) | H9199_RS02455 (hicB) | hicAB/- | |
| GI | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS04105 (yhaV) | H9199_RS04110 (prlF) | prlF-yhaV (relBE)/YhaV-PrlF | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS06540 (mazF) | H9199_RS06535 (mazE) | mazEF/PRK09907-MazE | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS08160 (vapC) | H9199_RS08155 (vapB) | vapBC/VapC-VagC | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS10570 (yoeB) | H9199_RS10565 (yefM) | yefM-yoeB (relBE)/YoeB-YefM | |
| GI | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS13325 (hipA) | H9199_RS13320 (hipB) | hipBA/HipA-HipB | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS13735 (hicA) | H9199_RS13730 (hicB) | hicAB/UPF0150(antitoxin) | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS18705 (Hha) | H9199_RS18700 (TomB) | Hha-TomB/- | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS18875 (itaT) | H9199_RS18870 (itaR) | itaRT/DUF1778(antitoxin) | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS20040 (yafQ) | H9199_RS20035 (dinJ) | DinJ-YafQ (relBE)/YafQ-RelB | |
| ICE IS/Tn | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS21905 (shpA) | H9199_RS21900 (shpB) | shpAB/BrnT-BrnA | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP060933 | H9199_RS22755 (chpB) | H9199_RS22760 (chpS) | chpSB/PRK09812-ChpS | |
| Plasmid | Escherichia coli strain EC12 (plasmid pEC12-3) | NZ_CP060935 | H9199_RS25570 (doc) | H9199_RS25575 (phd) | phd-doc/Doc-Phd | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS03000 (hipA) | JTC67_RS02995 (hipB) | hipBA/HipA-HipB | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS03210 (higB) | JTC67_RS03215 (higA) | higBA (relBE)/HigB-HigA | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS04890 (TacT2) | JTC67_RS04885 (TacA2) | tacAT/DUF1778(antitoxin) | |
| ICE | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS05650 (parE_1) | JTC67_RS05645 (paaA) | paaR-paaA-parE/- | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS08450 (higB) | JTC67_RS08445 (higA) | higBA (relBE)/HigB-HTH_XRE | |
| IS/Tn | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS08565 (Hha) | JTC67_RS08560 (TomB) | Hha-TomB/- | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS10715 (ccdB) | JTC67_RS10720 (ccdA) | ccdAB/CcdA(antitoxin) | |
| Prophage | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS13085 (panT) | JTC67_RS13090 (panA) | PanAT/DUF4065(antitoxin) | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS14155 (higB) | JTC67_RS14150 (higA) | higBA (relBE)/HTH(antitoxin) | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS16210 (HipT) | JTC67_RS16205 (HipS) | HipBST/HipA(toxin) | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS16540 (hicA) | JTC67_RS16545 (hicB) | hicAB/- | |
| Prophage | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS16785 (doc) | JTC67_RS16780 (phd) | phd-doc/Doc-RelB | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS16980 (ataT) | JTC67_RS16985 (ataR) | ataRT/DUF1778(antitoxin) | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS20305 (mazF) | JTC67_RS20300 (mazE) | mazEF/PRK09907-MazE | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS20655 (higB) | JTC67_RS20660 (higA) | higBA (relBE)/HigB-HigA | |
| - | Escherichia coli strain EC12 (chromosome) | NZ_CP070229 | JTC67_RS24240 (yoeB) | JTC67_RS24235 (yefM) | yefM-yoeB (relBE)/YoeB-YefM | |
| Plasmid | Escherichia coli strain EC12 (plasmid unnamed1) | NZ_CP070230 | JTC67_RS24920 (ccdB) | JTC67_RS24925 (ccdA) | ccdAB/CcdA(antitoxin) | |
| Plasmid | Escherichia coli strain EC12 (plasmid unnamed1) | NZ_CP070230 | JTC67_RS25095 (tacT) | JTC67_RS25100 (tacA) | tacAT/ElaA-DUF1778 | |
| Plasmid | Escherichia coli strain EC12 (plasmid unnamed1) | NZ_CP070230 | JTC67_RS25160 (vapC) | JTC67_RS25155 (vapB) | vapBC/VapC-VagC | |
| Plasmid | Escherichia coli strain EC12 (plasmid unnamed2) | NZ_CP070231 | JTC67_RS25965 (hicA) | JTC67_RS25960 (hicB) | hicAB/- | |
| Plasmid | Escherichia coli strain EC12 (plasmid unnamed2) | NZ_CP070231 | JTC67_RS25980 (TsxA) | JTC67_RS25975 (TsxB) | TsxAB/Xre(antitoxin) |