MGE detailed information
MGE type: Genomic_island MGE length: 46208 bp
Accession: NZ_CP060933 Location: 2659323..2705530 Organism: Escherichia coli strain EC12 Replicon: chromosome
Accession: NZ_CP060933 Location: 2659323..2705530 Organism: Escherichia coli strain EC12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9199_RS13165 (2654405) | 2654405..2655940 | - | 1536 | WP_001194889.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
| H9199_RS13170 (2656189) | 2656189..2657142 | + | 954 | WP_000154340.1 | transcriptional regulator LsrR | - |
| H9199_RS13175 (2657221) | 2657221..2658813 | + | 1593 | WP_000113127.1 | autoinducer-2 kinase | - |
| H9199_RS13185 (2659850) | 2659850..2660509 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| H9199_RS13190 (2660710) | 2660710..2661087 | - | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| H9199_RS13195 (2661154) | 2661154..2664120 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| H9199_RS13200 (2664123) | 2664123..2664683 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| H9199_RS13205 (2664809) | 2664809..2665159 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| H9199_RS13210 (2665362) | 2665362..2666375 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| H9199_RS13215 (2666533) | 2666533..2667006 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| H9199_RS13220 (2667137) | 2667137..2667925 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| H9199_RS13225 (2668131) | 2668131..2668478 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| H9199_RS13230 (2668472) | 2668472..2669311 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| H9199_RS13235 (2669439) | 2669439..2669939 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| H9199_RS13240 (2670115) | 2670115..2670900 | - | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| H9199_RS13245 (2670887) | 2670887..2672410 | - | 1524 | WP_072658848.1 | IS21 family transposase IS1326 | Transposase |
| H9199_RS13250 (2672533) | 2672533..2674077 | + | 1545 | WP_000287615.1 | IS3 family transposase IS1353 | Transposase |
| H9199_RS13255 (2674128) | 2674128..2674988 | - | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| H9199_RS13260 (2674991) | 2674991..2676670 | - | 1680 | WP_021529834.1 | Transposon Tn7 transposition protein TnsB ; Integrase | Integrase |
| H9199_RS13265 (2676745) | 2676745..2677413 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| H9199_RS13270 (2677449) | 2677449..2677685 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| H9199_RS13275 (2677682) | 2677682..2678044 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| H9199_RS13280 (2678062) | 2678062..2678559 | - | 498 | Protein_2590 | mercuric reductase | - |
| H9199_RS13285 (2678720) | 2678720..2679580 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| H9199_RS13290 (2679763) | 2679763..2680320 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| H9199_RS13295 (2680484) | 2680484..2683489 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| H9199_RS13300 (2683523) | 2683523..2683612 | - | 90 | Protein_2594 | mercuric transporter MerT family protein | - |
| H9199_RS13305 (2683684) | 2683684..2684118 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| H9199_RS13315 (2684977) | 2684977..2689233 | + | 4257 | Protein_2597 | Outer membrane protein IcsA autotransporter | VF |
| H9199_RS13320 (2689442) | 2689442..2689708 | + | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| H9199_RS13325 (2689708) | 2689708..2691030 | + | 1323 | WP_001125454.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| H9199_RS13330 (2691342) | 2691342..2691550 | + | 209 | Protein_2600 | AraC family transcriptional regulator | - |
| H9199_RS13335 (2691982) | 2691982..2692545 | + | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| H9199_RS13340 (2692906) | 2692906..2693616 | + | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| H9199_RS13345 (2693658) | 2693658..2696309 | + | 2652 | WP_001348041.1 | Outer membrane usher protein FimD | VF |
| H9199_RS13350 (2696323) | 2696323..2696853 | + | 531 | WP_000876784.1 | Protein FimF | VF |
| H9199_RS13355 (2696866) | 2696866..2697369 | + | 504 | WP_000825458.1 | Protein FimG | VF |
| H9199_RS13360 (2697429) | 2697429..2698343 | + | 915 | WP_000520679.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| H9199_RS13365 (2698677) | 2698677..2700956 | + | 2280 | WP_000726702.1 | acid resistance putative oxidoreductase YdeP | - |
| H9199_RS13370 (2701204) | 2701204..2701401 | + | 198 | WP_000543389.1 | two-component system connector SafA | - |
| H9199_RS13375 (2701476) | 2701476..2702237 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| H9199_RS13380 (2702639) | 2702639..2704321 | + | 1683 | WP_001295684.1 | sulfatase | - |
| H9199_RS13385 (2704373) | 2704373..2705530 | + | 1158 | WP_001295683.1 | anaerobic sulfatase maturase | - |
| H9199_RS13390 (2705496) | 2705496..2705618 | - | 123 | WP_120795387.1 | protein YneP | - |
| H9199_RS13395 (2705821) | 2705821..2707506 | + | 1686 | WP_001296749.1 | ABC transporter ATP-binding protein/permease | - |
| H9199_RS13400 (2707544) | 2707544..2709916 | + | 2373 | WP_000832440.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|