MGE detailed information
MGE type: Mobilizable plasmid MGE length: 58414 bp
Accession: NZ_CP070231 Location: 1..58414 Organism: Escherichia coli strain EC12 Replicon: plasmid unnamed2
Accession: NZ_CP070231 Location: 1..58414 Organism: Escherichia coli strain EC12 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JTC67_RS25810 (JTC67_25610) | 696..1751 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| JTC67_RS25815 (JTC67_25615) | 1767..3725 | + | 1959 | WP_233679835.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JTC67_RS25820 (JTC67_25620) | 3776..5419 | + | 1644 | WP_233679836.1 | Outer membrane lipoprotein BfpB | VF |
| JTC67_RS25825 (JTC67_25625) | 5470..6780 | + | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| JTC67_RS25830 (JTC67_25630) | 6764..7258 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| JTC67_RS25835 (JTC67_25635) | 7283..8821 | + | 1539 | WP_000466227.1 | Type II secretion system protein E | VF |
| JTC67_RS25840 (JTC67_25640) | 8812..9921 | + | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JTC67_RS25845 (JTC67_25645) | 9966..10523 | + | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| JTC67_RS25850 (JTC67_25650) | 10589..11071 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| JTC67_RS25855 (JTC67_25655) | 11075..11710 | + | 636 | WP_025380733.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JTC67_RS25860 (JTC67_25660) | 11723..13009 | + | 1287 | WP_000750514.1 | hypothetical protein | VF |
| JTC67_RS25865 (JTC67_25670) | 13237..13590 | + | 354 | WP_171764028.1 | pilus assembly protein | - |
| JTC67_RS25870 (JTC67_25680) | 14774..15898 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| JTC67_RS25875 (JTC67_25685) | 15958..16500 | + | 543 | WP_233679837.1 | thermonuclease family protein | - |
| JTC67_RS25880 (JTC67_25690) | 16594..18270 | + | 1677 | WP_121865608.1 | PcfJ domain-containing protein | - |
| JTC67_RS25885 (JTC67_25695) | 18440..19015 | + | 576 | WP_001485009.1 | hypothetical protein | - |
| JTC67_RS25890 (JTC67_25700) | 19020..21176 | + | 2157 | WP_000765168.1 | type IA DNA topoisomerase | - |
| JTC67_RS25895 (JTC67_25710) | 21651..21989 | + | 339 | WP_021575835.1 | hypothetical protein | - |
| JTC67_RS25900 (JTC67_25715) | 22108..22314 | + | 207 | WP_000850853.1 | hemolysin expression modulator Hha | - |
| JTC67_RS25905 (JTC67_25720) | 22886..23326 | + | 441 | WP_000666082.1 | hypothetical protein | - |
| JTC67_RS25910 (JTC67_25725) | 23369..27592 | - | 4224 | WP_050953169.1 | hypothetical protein | - |
| JTC67_RS25915 (JTC67_25730) | 27589..27930 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| JTC67_RS25920 (JTC67_25735) | 28299..28700 | + | 402 | WP_021575837.1 | hypothetical protein | - |
| JTC67_RS25925 (JTC67_25740) | 28718..29470 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| JTC67_RS25930 (JTC67_25745) | 29472..30179 | + | 708 | WP_000108794.1 | hypothetical protein | - |
| JTC67_RS25935 | 30199..30339 | + | 141 | Protein_26 | hypothetical protein | - |
| JTC67_RS25940 (JTC67_25750) | 30316..30639 | + | 324 | WP_223666488.1 | hypothetical protein | - |
| JTC67_RS25945 (JTC67_25755) | 30641..30967 | + | 327 | WP_000206697.1 | hypothetical protein | - |
| JTC67_RS25950 (JTC67_25760) | 31227..31526 | - | 300 | WP_233679829.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JTC67_RS25955 | 31767..32210 | + | 444 | WP_023223351.1 | hypothetical protein | - |
| JTC67_RS25960 (JTC67_25770) | 32298..32645 | - | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JTC67_RS25965 (JTC67_25775) | 32642..32890 | - | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JTC67_RS25970 (JTC67_25780) | 33355..33633 | - | 279 | WP_000545937.1 | hypothetical protein | - |
| JTC67_RS25975 (JTC67_25785) | 34183..34434 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| JTC67_RS25980 (JTC67_25790) | 34424..34684 | - | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| JTC67_RS25985 (JTC67_25795) | 34736..34960 | - | 225 | WP_000814383.1 | hypothetical protein | - |
| JTC67_RS25990 (JTC67_25800) | 35058..35267 | - | 210 | WP_000866037.1 | hypothetical protein | - |
| JTC67_RS25995 (JTC67_25805) | 35308..35631 | - | 324 | WP_233679830.1 | hypothetical protein | - |
| JTC67_RS26000 (JTC67_25810) | 36212..36541 | - | 330 | WP_000855121.1 | hypothetical protein | - |
| JTC67_RS26005 (JTC67_25815) | 37139..37804 | + | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| JTC67_RS26010 (JTC67_25820) | 37878..38162 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| JTC67_RS26015 (JTC67_25825) | 38180..38776 | - | 597 | WP_000125164.1 | ProQ/FINO family protein | - |
| JTC67_RS26020 (JTC67_25830) | 38926..39045 | - | 120 | WP_227525580.1 | Hok/Gef family protein | - |
| JTC67_RS26025 | 38993..39145 | - | 153 | Protein_44 | FlmC family protein | - |
| JTC67_RS26030 | 40010..40330 | + | 321 | WP_233679831.1 | hypothetical protein | - |
| JTC67_RS26035 (JTC67_25840) | 40491..41519 | - | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| JTC67_RS26040 (JTC67_25845) | 42657..43109 | + | 453 | WP_000101560.1 | CaiF/GrlA family transcriptional regulator | - |
| JTC67_RS26045 (JTC67_25850) | 43102..43296 | + | 195 | WP_001127356.1 | DUF1187 family protein | - |
| JTC67_RS26050 (JTC67_25855) | 43342..44295 | + | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| JTC67_RS26055 (JTC67_25860) | 44358..44801 | + | 444 | WP_000964332.1 | NfeD family protein | - |
| JTC67_RS26060 (JTC67_25865) | 44986..45642 | + | 657 | WP_233679832.1 | hypothetical protein | - |
| JTC67_RS26065 (JTC67_25870) | 45905..46207 | + | 303 | WP_001485001.1 | hypothetical protein | - |
| JTC67_RS26070 (JTC67_25875) | 46204..46461 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| JTC67_RS26075 (JTC67_25880) | 46465..47460 | + | 996 | WP_001028541.1 | hypothetical protein | VF |
| JTC67_RS26080 (JTC67_25885) | 47466..48110 | + | 645 | WP_001310442.1 | hypothetical protein | VF |
| JTC67_RS26085 (JTC67_25890) | 48119..48343 | + | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| JTC67_RS26090 (JTC67_25895) | 48566..49375 | - | 810 | WP_001005150.1 | DUF5710 domain-containing protein | - |
| JTC67_RS26095 (JTC67_25900) | 49423..50058 | + | 636 | WP_000835772.1 | hypothetical protein | - |
| JTC67_RS26100 (JTC67_25905) | 50125..50424 | + | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| JTC67_RS26105 (JTC67_25910) | 50427..51662 | + | 1236 | WP_233679833.1 | hypothetical protein | VF |
| JTC67_RS26110 (JTC67_25915) | 51668..52105 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| JTC67_RS26115 (JTC67_25920) | 52224..52622 | + | 399 | WP_001153668.1 | hypothetical protein | - |
| JTC67_RS26120 (JTC67_25925) | 52643..53227 | + | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| JTC67_RS26125 | 53227..53517 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| JTC67_RS26130 (JTC67_25935) | 53588..53908 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| JTC67_RS26135 (JTC67_25940) | 53914..56271 | + | 2358 | WP_139614679.1 | VirB4 family type IV secretion system protein | - |
| JTC67_RS26140 (JTC67_25945) | 56437..57171 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| JTC67_RS26145 (JTC67_25950) | 57168..57938 | + | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|