NZ_CP0702301..163194

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 163194 bp
Accession: NZ_CP070230        Location: 1..163194         Organism: Escherichia coli strain EC12       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JTC67_RS24790 (120) 120..791 - 672 WP_062859934.1 type-F conjugative transfer system secretin TraK -
JTC67_RS24795 (834) 834..1400 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
JTC67_RS24800 (1422) 1422..1733 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
JTC67_RS24805 (1748) 1748..2146 - 399 WP_000340280.1 type IV conjugative transfer system pilin TraA -
JTC67_RS24810 (2180) 2180..2407 - 228 WP_077878533.1 conjugal transfer relaxosome protein TraY -
JTC67_RS24815 (2793) 2793..3233 - 441 WP_233679824.1 hypothetical protein -
JTC67_RS24820 (3425) 3425..3808 - 384 WP_062863975.1 conjugal transfer relaxosome DNA-binding protein TraM -
JTC67_RS24825 (4084) 4084..4731 + 648 WP_139118357.1 hypothetical protein VF
JTC67_RS24830 (5026) 5026..5847 - 822 WP_001234469.1 DUF932 domain-containing protein -
JTC67_RS24835 (5966) 5966..6252 - 287 Protein_10 hypothetical protein -
JTC67_RS24840 (6449) 6449..6694 - 246 WP_071602007.1 hypothetical protein -
JTC67_RS24845 (6619) 6619..6867 - 249 WP_233679826.1 hypothetical protein -
JTC67_RS24850 (6810) 6810..6980 - 171 Protein_13 hypothetical protein -
JTC67_RS24855 (6977) 6977..7879 - 903 WP_136503197.1 DUF1281 domain-containing protein -
JTC67_RS24860 (8318) 8318..9277 + 960 WP_233679825.1 plasmid segregation protein ParM -
JTC67_RS24865 (9277) 9277..9672 + 396 WP_000445930.1 plasmid partitioning/stability family protein -
JTC67_RS24870 (10041) 10041..11249 - 1209 WP_074466352.1 IS256 family transposase IS1414 Transposase
JTC67_RS24875 (11323) 11323..12345 + 1023 Protein_18 alpha-galactosidase -
JTC67_RS24880 (12408) 12408..12521 + 114 Protein_19 MFS transporter -
JTC67_RS24885 (12516) 12516..12815 - 300 Protein_20 IS3 family transposase IS2 Transposase
JTC67_RS24890 (12814) 12814..13269 + 456 Protein_21 IS3 family transposase ISPeat2 Transposase
JTC67_RS24895 (13302) 13302..13844 + 543 Protein_22 IS3 family transposase ISEc48 Transposase
JTC67_RS24900 (14032) 14032..14595 + 564 WP_062860118.1 Major structural subunit of bundle-forming pilus VF
JTC67_RS24905 (14850) 14850..15503 - 654 Protein_24 IS3 family transposase IS629 Transposase
JTC67_RS24910 (15512) 15512..15685 + 174 Protein_25 IS91 family transposase -
JTC67_RS24915 (15855) 15855..15987 - 133 Protein_26 phage integrase family protein -
JTC67_RS24920 (15988) 15988..16293 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
JTC67_RS24925 (16295) 16295..16513 - 219 WP_062860119.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
JTC67_RS24930 (17109) 17109..17353 + 245 Protein_29 hypothetical protein -
JTC67_RS24935 (17353) 17353..17943 + 591 WP_062860120.1 hypothetical protein -
JTC67_RS24945 (19718) 19718..20533 + 816 WP_062860059.1 helix-turn-helix transcriptional regulator -
JTC67_RS24950 (20561) 20561..21052 - 492 Protein_33 transposase -
JTC67_RS24955 (21750) 21750..22831 + 1082 WP_101750278.1 IS3 family transposase ISEc16 Transposase
JTC67_RS24960 (23401) 23401..24177 + 777 WP_062860055.1 helix-turn-helix transcriptional regulator -
JTC67_RS24965 (24413) 24413..25072 + 660 Protein_36 IS4 family transposase ISEc60 Transposase
JTC67_RS24970 (25083) 25083..25471 - 389 Protein_37 IS256 family transposase ISEic2 Transposase
JTC67_RS24975 (25757) 25757..26137 - 381 WP_062860054.1 Major structural subunit of bundle-forming pilus VF
JTC67_RS24985 (27802) 27802..27930 - 129 Protein_40 IS3 family transposase ISEc16 Transposase
JTC67_RS24990 (28396) 28396..28845 - 450 WP_062860050.1 hypothetical protein VF
JTC67_RS24995 (28848) 28848..29336 - 489 WP_062860049.1 hypothetical protein VF
JTC67_RS25000 (29326) 29326..29874 - 549 WP_062860048.1 hypothetical protein VF
JTC67_RS25005 (29871) 29871..30410 - 540 WP_062860047.1 hypothetical protein VF
JTC67_RS25010 (30430) 30430..30876 - 447 WP_062860046.1 hypothetical protein VF
JTC67_RS25015 (30858) 30858..31607 - 750 WP_062860045.1 Leader peptidase PppA VF
JTC67_RS25020 (31614) 31614..32570 - 957 WP_062860044.1 ComG operon protein 1 VF
JTC67_RS25025 (32589) 32589..33647 - 1059 WP_062860043.1 Toxin coregulated pilus biosynthesis protein E VF
JTC67_RS25030 (33654) 33654..35261 - 1608 WP_122995108.1 Toxin coregulated pilus biosynthesis protein T VF
JTC67_RS25035 (35268) 35268..35762 - 495 WP_062860060.1 hypothetical protein VF
JTC67_RS25040 (35740) 35740..36948 - 1209 WP_062860041.1 hypothetical protein VF
JTC67_RS25045 (36945) 36945..38603 - 1659 WP_062860040.1 Outer membrane lipoprotein BfpB VF
JTC67_RS25050 (38610) 38610..39011 - 402 WP_062860039.1 hypothetical protein VF
JTC67_RS25055 (39058) 39058..39639 - 582 WP_062860038.1 Major structural subunit of bundle-forming pilus VF
JTC67_RS25060 (40062) 40062..40800 + 739 Protein_55 site-specific integrase -
JTC67_RS25065 (41079) 41079..42056 - 978 WP_062860037.1 RepB family plasmid replication initiator protein -
JTC67_RS25070 (43147) 43147..43368 + 222 Protein_57 F7-2 fimbrial protein -
JTC67_RS25075 (43453) 43453..43866 + 414 WP_062859980.1 hypothetical protein -
JTC67_RS25080 (43817) 43817..45014 + 1198 Protein_59 IS91 family transposase ISEc37 Transposase
JTC67_RS25085 (45954) 45954..46814 + 861 WP_062859948.1 alpha/beta hydrolase -
JTC67_RS25090 (47773) 47773..48396 - 624 Protein_61 ProQ/FINO family protein -
JTC67_RS25095 (49379) 49379..49867 - 489 WP_062859951.1 GNAT family N-acetyltransferase Toxin Detail
JTC67_RS25100 (49855) 49855..50139 - 285 WP_073534343.1 DUF1778 domain-containing protein Antitoxin Detail
JTC67_RS25105 (51054) 51054..51911 - 858 WP_062859953.1 incFII family plasmid replication initiator RepA -
JTC67_RS25110 (51904) 51904..51978 - 75 WP_062859978.1 RepA leader peptide Tap -
JTC67_RS25115 (52221) 52221..52469 - 249 WP_000083839.1 replication regulatory protein RepA -
JTC67_RS25120 (52709) 52709..53299 - 591 WP_062859954.1 DUF2726 domain-containing protein -
JTC67_RS25125 (53338) 53338..53547 - 210 WP_001299729.1 hemolysin expression modulator Hha -
JTC67_RS25130 (53593) 53593..54054 - 462 Protein_69 thermonuclease family protein -
JTC67_RS25135 (54300) 54300..54512 - 213 WP_062859955.1 hypothetical protein -
JTC67_RS25140 (54653) 54653..55213 - 561 WP_062859956.1 fertility inhibition protein FinO -
JTC67_RS25145 (55268) 55268..56014 - 747 WP_062859957.1 conjugal transfer pilus acetylase TraX -
JTC67_RS25150 (56034) 56034..61304 - 5271 WP_062859958.1 Multifunctional conjugation protein TraI Relaxase
JTC67_RS25155 (61386) 61386..61613 + 228 WP_000450526.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
JTC67_RS25160 (61613) 61613..62011 + 399 WP_062859959.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
JTC67_RS25165 (62020) 62020..64173 - 2154 WP_062859960.1 type IV conjugative transfer system coupling protein TraD -
JTC67_RS25170 (64591) 64591..65187 - 597 WP_227170961.1 hypothetical protein -
JTC67_RS25175 (65402) 65402..65710 + 309 WP_062859961.1 heavy metal-binding domain-containing protein -
JTC67_RS25180 (65713) 65713..68532 - 2820 WP_062862128.1 conjugal transfer mating-pair stabilization protein TraG -
JTC67_RS25185 (68529) 68529..69902 - 1374 WP_062859963.1 conjugal transfer pilus assembly protein TraH -
JTC67_RS25190 (69889) 69889..70281 - 393 WP_062859964.1 F-type conjugal transfer protein TrbF -
JTC67_RS25195 (70292) 70292..70549 - 258 WP_062859965.1 P-type conjugative transfer protein TrbJ -
JTC67_RS25200 (70539) 70539..71084 - 546 WP_000059817.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
JTC67_RS25205 (71071) 71071..71355 - 285 WP_000624108.1 type-F conjugative transfer system pilin chaperone TraQ -
JTC67_RS25210 (71436) 71436..71750 + 315 WP_062859966.1 hypothetical protein -
JTC67_RS25215 (71752) 71752..72099 - 348 WP_062859967.1 conjugal transfer protein TrbA -
JTC67_RS25220 (72115) 72115..72858 - 744 WP_062859968.1 type-F conjugative transfer system pilin assembly protein TraF -
JTC67_RS25225 (72851) 72851..73108 - 258 WP_062859969.1 conjugal transfer protein TrbE -
JTC67_RS25230 (73135) 73135..74997 - 1863 WP_227170960.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
JTC67_RS25235 (75233) 75233..75613 - 381 WP_062859970.1 hypothetical protein -
JTC67_RS25240 (75610) 75610..76248 - 639 WP_062859971.1 type-F conjugative transfer system pilin assembly protein TrbC -
JTC67_RS25245 (76257) 76257..77249 - 993 WP_062859972.1 conjugal transfer pilus assembly protein TraU -
JTC67_RS25250 (77246) 77246..77878 - 633 WP_062859973.1 type-F conjugative transfer system protein TraW -
JTC67_RS25255 (77875) 77875..78261 - 387 WP_062859974.1 type-F conjugative transfer system protein TrbI -
JTC67_RS25260 (78258) 78258..80888 - 2631 WP_062859975.1 type IV secretion system protein TraC -
JTC67_RS25265 (81014) 81014..81376 - 363 WP_029400175.1 hypothetical protein -
JTC67_RS25270 (81404) 81404..81622 - 219 WP_000556751.1 hypothetical protein -
JTC67_RS25275 (81702) 81702..82178 - 477 WP_062859976.1 hypothetical protein -
JTC67_RS25280 (82171) 82171..82392 - 222 WP_001278695.1 conjugal transfer protein TraR -
JTC67_RS25285 (82527) 82527..83042 - 516 WP_000809895.1 type IV conjugative transfer system lipoprotein TraV -
JTC67_RS25290 (83039) 83039..83359 - 321 WP_062863921.1 conjugal transfer protein TrbD -
JTC67_RS25295 (83346) 83346..83936 - 591 WP_062897178.1 conjugal transfer pilus-stabilizing protein TraP -
JTC67_RS25300 (83926) 83926..85353 - 1428 WP_074464844.1 F-type conjugal transfer pilus assembly protein TraB -
JTC67_RS25305 (85353) 85353..86081 - 729 WP_074460727.1 type-F conjugative transfer system secretin TraK -
JTC67_RS25310 (86068) 86068..86634 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
JTC67_RS25315 (86656) 86656..86967 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
JTC67_RS25320 (86982) 86982..87380 - 399 WP_062859933.1 type IV conjugative transfer system pilin TraA -
JTC67_RS25325 (87414) 87414..87641 - 228 WP_000589558.1 conjugal transfer relaxosome protein TraY -
JTC67_RS25330 (87761) 87761..88408 - 648 WP_074464494.1 transcriptional regulator TraJ family protein -
JTC67_RS25335 (88600) 88600..88983 - 384 WP_001151530.1 conjugal transfer relaxosome DNA-binding protein TraM -
JTC67_RS25340 (89259) 89259..89906 + 648 WP_139118357.1 hypothetical protein VF
JTC67_RS25345 (90201) 90201..91021 - 821 Protein_112 DUF945 domain-containing protein -
JTC67_RS25350 (91140) 91140..91426 - 287 Protein_113 hypothetical protein -
JTC67_RS25355 (91451) 91451..91657 - 207 WP_062897188.1 hypothetical protein -
JTC67_RS25360 (91727) 91727..91900 + 174 Protein_115 hypothetical protein -
JTC67_RS25365 (91898) 91898..92128 - 231 WP_073976915.1 hypothetical protein -
JTC67_RS25370 (92348) 92348..92473 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
JTC67_RS25375 (92415) 92415..92564 - 150 Protein_118 plasmid maintenance protein Mok -
- (92550) 92550..92774 - 225 NuclAT_0 - Antitoxin Detail
- (92550) 92550..92774 - 225 NuclAT_0 - Antitoxin Detail
- (92550) 92550..92774 - 225 NuclAT_0 - Antitoxin Detail
- (92550) 92550..92774 - 225 NuclAT_0 - Antitoxin Detail
JTC67_RS25380 (92586) 92586..92774 + 189 WP_001299721.1 hypothetical protein -
JTC67_RS25385 (92743) 92743..93505 - 763 Protein_120 plasmid SOS inhibition protein A -
JTC67_RS25390 (93502) 93502..93936 - 435 WP_062860170.1 conjugation system SOS inhibitor PsiB -
JTC67_RS25395 (93991) 93991..95948 - 1958 Protein_122 ParB/RepB/Spo0J family partition protein -
JTC67_RS25400 (96013) 96013..96246 - 234 WP_000006030.1 DUF905 family protein -
JTC67_RS25405 (96308) 96308..96847 - 540 WP_009426937.1 single-stranded DNA-binding protein -
JTC67_RS25410 (96873) 96873..97079 - 207 WP_000547971.1 hypothetical protein -
JTC67_RS25415 (97320) 97320..97565 - 246 WP_071602007.1 hypothetical protein -
JTC67_RS25420 (97490) 97490..97720 - 231 WP_225876888.1 hypothetical protein -
JTC67_RS25425 (97717) 97717..98280 - 564 WP_001377760.1 class I SAM-dependent methyltransferase -
JTC67_RS25430 (98328) 98328..99689 - 1362 WP_000170675.1 DUF3560 domain-containing protein -
JTC67_RS25435 (99741) 99741..99971 - 231 WP_000218642.1 hypothetical protein -
JTC67_RS25440 (100489) 100489..100644 + 156 Protein_131 hypothetical protein -
JTC67_RS25445 (101009) 101009..101200 - 192 WP_001027519.1 hypothetical protein -
JTC67_RS25450 (101197) 101197..101619 - 423 WP_032197515.1 DUF1380 family protein -
JTC67_RS25455 (101666) 101666..102091 - 426 WP_062859984.1 antirestriction protein -
JTC67_RS25460 (102400) 102400..103991 - 1592 Protein_135 IS66 family transposase ISEc47 Transposase
JTC67_RS25465 (104022) 104022..104372 - 351 WP_000624677.1 IS66 family transposase IS682 Transposase
JTC67_RS25470 (104369) 104369..104788 - 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
JTC67_RS25475 (105264) 105264..105443 + 180 Protein_138 transposase domain-containing protein -
JTC67_RS25480 (105790) 105790..106746 - 957 Protein_139 RNA-guided endonuclease TnpB family protein -
JTC67_RS25485 (106882) 106882..107168 - 287 Protein_140 type II toxin-antitoxin system RelE/ParE family toxin -
JTC67_RS25490 (107165) 107165..107416 - 252 WP_001132891.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
JTC67_RS25495 (107938) 107938..108909 - 972 WP_062862136.1 ParB/RepB/Spo0J family plasmid partition protein -
JTC67_RS25500 (108909) 108909..110075 - 1167 WP_062860116.1 plasmid-partitioning protein SopA -
JTC67_RS25505 (110499) 110499..110639 - 141 Protein_144 ATP-binding protein -
JTC67_RS25510 (110649) 110649..111554 - 906 Protein_145 IS3 family transposase ISLad1 Transposase
JTC67_RS25515 (111542) 111542..111622 + 81 Protein_146 hypothetical protein -
JTC67_RS25520 (111619) 111619..112770 + 1152 Protein_147 IS30 family transposase IS30D Transposase
JTC67_RS25525 (112783) 112783..113040 - 258 Protein_148 IS3 family transposase IS911 Transposase
JTC67_RS25530 (113112) 113112..113754 - 643 Protein_149 IS21 family transposase IS100 Transposase
JTC67_RS25535 (113751) 113751..114561 - 811 Protein_150 DDE-type integrase/transposase/recombinase -
JTC67_RS25540 (114983) 114983..115351 + 369 WP_053264260.1 DUF305 domain-containing protein -
JTC67_RS25545 (115338) 115338..116399 + 1062 WP_062860125.1 hypothetical protein -
JTC67_RS25550 (117245) 117245..117658 + 414 WP_062859980.1 hypothetical protein -
JTC67_RS25555 (117609) 117609..118466 + 858 Protein_154 IS91 family transposase ISEc37 Transposase
JTC67_RS25565 (119725) 119725..120057 + 333 Protein_156 IS91 family transposase ISEc37 Transposase
JTC67_RS25570 (120482) 120482..120727 + 246 WP_064577908.1 hypothetical protein -
JTC67_RS25575 (121008) 121008..121421 + 414 WP_062859980.1 hypothetical protein -
JTC67_RS25580 (121372) 121372..122568 + 1197 Protein_159 IS91 family transposase -
JTC67_RS25585 (122734) 122734..123942 + 1209 WP_106878861.1 IS256 family transposase IS1414 Transposase
JTC67_RS25590 (123979) 123979..125088 - 1110 Protein_161 alpha-galactosidase -
JTC67_RS25595 (125161) 125161..126187 - 1027 Protein_162 substrate-binding domain-containing protein -
JTC67_RS25600 (126277) 126277..127298 - 1022 Protein_163 IS3 family transposase -
JTC67_RS25605 (127419) 127419..127898 + 480 Protein_164 Tyrosine recombinase XerD VF
JTC67_RS25610 (128852) 128852..129961 + 1110 WP_025263474.1 porin OmpC -
JTC67_RS25615 (130121) 130121..130888 - 768 WP_062859902.1 helix-turn-helix domain-containing protein -
JTC67_RS25620 (131788) 131788..132381 + 594 Protein_167 ProQ/FINO family protein -
JTC67_RS25625 (132826) 132826..134022 + 1197 WP_062859901.1 IS110 family transposase ISEc20 Transposase
JTC67_RS25630 (134048) 134048..134938 - 891 Protein_169 IS3 family transposase ISKpn38 Transposase
JTC67_RS25635 (135011) 135011..135193 + 183 Protein_170 iron-containing alcohol dehydrogenase -
JTC67_RS25640 (135348) 135348..136082 - 735 WP_000578339.1 helix-turn-helix domain-containing protein -
JTC67_RS25645 (136172) 136172..136480 + 309 WP_062859900.1 PerC family transcriptional regulator -
JTC67_RS25650 (136639) 136639..136977 + 339 WP_025263478.1 c-type lysozyme inhibitor -
JTC67_RS25655 (137534) 137534..137674 - 141 WP_152930419.1 hypothetical protein -
JTC67_RS25660 (137757) 137757..138600 + 844 Protein_175 IS3 family transposase IS1351 Transposase
JTC67_RS25665 (138631) 138631..140222 - 1592 Protein_176 IS66 family transposase ISEc47 Transposase
JTC67_RS25670 (140253) 140253..140603 - 351 WP_000624677.1 IS66 family transposase IS682 Transposase
JTC67_RS25675 (140542) 140542..141018 - 477 WP_233679787.1 IS66 family transposase ISEc23 Transposase
JTC67_RS25680 (141106) 141106..141324 + 219 Protein_179 transposase -
JTC67_RS25685 (141395) 141395..141553 + 159 Protein_180 ATP-binding protein -
JTC67_RS25690 (141615) 141615..141860 + 246 Protein_181 IS91 family transposase ISEc37 Transposase
JTC67_RS25695 (142448) 142448..145945 + 3498 WP_062860082.1 Outer membrane protein IcsA autotransporter VF
JTC67_RS25700 (146120) 146120..146325 - 206 Protein_183 hypothetical protein -
JTC67_RS25705 (146279) 146279..146518 + 240 WP_227170989.1 alkaline phosphatase -
JTC67_RS25710 (146806) 146806..147096 - 291 WP_062860084.1 type II toxin-antitoxin system RelE/ParE family toxin -
JTC67_RS25715 (147255) 147255..147674 + 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
JTC67_RS25720 (147671) 147671..148021 + 351 WP_000624677.1 IS66 family transposase IS682 Transposase
JTC67_RS25725 (148052) 148052..149644 + 1593 WP_006703274.1 IS66 family transposase ISEc47 Transposase
JTC67_RS25730 (149737) 149737..150579 + 843 Protein_189 IS66 family transposase ISEc8 Transposase
JTC67_RS25735 (150603) 150603..150737 - 135 Protein_190 IS66 family insertion sequence element accessory protein TnpB -
JTC67_RS25740 (150805) 150805..151113 + 309 Protein_191 IS256 family transposase IS1414 Transposase
JTC67_RS25745 (151144) 151144..152735 - 1592 Protein_192 IS66 family transposase ISEc47 Transposase
JTC67_RS25750 (152765) 152765..153115 - 351 WP_000624677.1 IS66 family transposase IS682 Transposase
JTC67_RS25755 (153112) 153112..153531 - 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
JTC67_RS25760 (153617) 153617..154927 + 1311 Protein_195 conjugal transfer protein TraB -
JTC67_RS25765 (154917) 154917..155096 + 180 Protein_196 conjugal transfer protein TraP -
JTC67_RS25770 (155014) 155014..155397 - 384 WP_233679827.1 IS3 family transposase ISBope1 Transposase
JTC67_RS25775 (155456) 155456..155863 + 408 WP_233679828.1 hypothetical protein -
JTC67_RS25780 (155860) 155860..156135 + 276 WP_062860182.1 hypothetical protein -
JTC67_RS25785 (156347) 156347..160444 + 4098 WP_064768262.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
JTC67_RS25790 (160779) 160779..161198 + 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
JTC67_RS25795 (161195) 161195..161545 + 351 WP_000624677.1 IS66 family transposase IS682 Transposase
JTC67_RS25800 (161575) 161575..163166 + 1592 Protein_203 IS66 family transposase ISEc47 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance