MGE detailed information
MGE type: Prophage MGE length: 46230 bp
Accession: NZ_CP070229 Location: 2506990..2553219 Organism: Escherichia coli strain EC12 Replicon: chromosome
Accession: NZ_CP070229 Location: 2506990..2553219 Organism: Escherichia coli strain EC12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JTC67_RS12740 (2502158) | 2502158..2502400 | - | 243 | WP_000891396.1 | envelope stress response protein PspG | - |
| JTC67_RS12745 (2502534) | 2502534..2503571 | - | 1038 | WP_021560166.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| JTC67_RS12750 (2503660) | 2503660..2504757 | + | 1098 | WP_000332257.1 | site-specific integrase | - |
| JTC67_RS12755 (2504819) | 2504819..2505019 | + | 201 | WP_001217107.1 | DinI-like family protein | - |
| JTC67_RS12760 (2505061) | 2505061..2505201 | - | 141 | WP_086204751.1 | capsid protein | - |
| JTC67_RS12765 (2505689) | 2505689..2506477 | + | 789 | WP_021560165.1 | alpha/beta hydrolase | - |
| JTC67_RS12770 (2506990) | 2506990..2507529 | - | 540 | WP_021560164.1 | tail assembly chaperone | - |
| JTC67_RS12775 (2507531) | 2507531..2508322 | - | 792 | WP_074464704.1 | phage tail protein | - |
| JTC67_RS12780 (2508322) | 2508322..2509386 | - | 1065 | WP_074464705.1 | hypothetical protein | - |
| JTC67_RS12785 (2509409) | 2509409..2510578 | - | 1170 | WP_074464706.1 | DUF2313 domain-containing protein | - |
| JTC67_RS12790 (2510587) | 2510587..2511741 | - | 1155 | WP_021560160.1 | baseplate J/gp47 family protein | - |
| JTC67_RS12795 (2511743) | 2511743..2512180 | - | 438 | WP_074464707.1 | phage GP46 family protein | - |
| JTC67_RS12800 (2512182) | 2512182..2512763 | - | 582 | WP_062897569.1 | phage baseplate assembly protein | - |
| JTC67_RS12805 (2512760) | 2512760..2513848 | - | 1089 | WP_233679675.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| JTC67_RS12810 (2513845) | 2513845..2515257 | - | 1413 | WP_021560156.1 | DNA circularization N-terminal domain-containing protein | - |
| JTC67_RS12815 (2515268) | 2515268..2517235 | - | 1968 | WP_074464709.1 | transglycosylase SLT domain-containing protein | - |
| JTC67_RS12820 (2517371) | 2517371..2517652 | - | 282 | WP_021560154.1 | phage tail assembly protein | - |
| JTC67_RS12825 (2517652) | 2517652..2518017 | - | 366 | WP_050576033.1 | phage tail tube protein | - |
| JTC67_RS12830 (2518057) | 2518057..2519559 | - | 1503 | WP_021560152.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| JTC67_RS12835 (2519556) | 2519556..2519792 | - | 237 | WP_021560151.1 | DUF2635 domain-containing protein | - |
| JTC67_RS12840 (2519806) | 2519806..2520366 | - | 561 | WP_021560150.1 | hypothetical protein | - |
| JTC67_RS12845 (2520366) | 2520366..2520698 | - | 333 | WP_021560149.1 | hypothetical protein | - |
| JTC67_RS12850 (2520682) | 2520682..2520867 | - | 186 | WP_000146201.1 | hypothetical protein | - |
| JTC67_RS12855 (2520869) | 2520869..2521924 | - | 1056 | WP_001290409.1 | major capsid protein | - |
| JTC67_RS12860 (2521980) | 2521980..2522381 | - | 402 | WP_021560148.1 | head decoration protein | - |
| JTC67_RS12865 (2522381) | 2522381..2522953 | - | 573 | WP_021560147.1 | hypothetical protein | - |
| JTC67_RS12870 (2522946) | 2522946..2523806 | - | 861 | WP_021560146.1 | S49 family peptidase | - |
| JTC67_RS12875 (2523803) | 2523803..2525443 | - | 1641 | WP_062897562.1 | phage portal protein | - |
| JTC67_RS12880 (2525452) | 2525452..2525703 | - | 252 | WP_000982249.1 | gpW family head-tail joining protein | - |
| JTC67_RS12885 (2525700) | 2525700..2527664 | - | 1965 | WP_139118635.1 | phage terminase large subunit family protein | - |
| JTC67_RS12890 (2527633) | 2527633..2528346 | - | 714 | WP_021560143.1 | hypothetical protein | - |
| JTC67_RS12895 (2528475) | 2528475..2529140 | - | 666 | WP_024229510.1 | hypothetical protein | - |
| JTC67_RS12900 (2529326) | 2529326..2529394 | - | 69 | Protein_2539 | hypothetical protein | - |
| JTC67_RS12905 (2529593) | 2529593..2529775 | - | 183 | WP_073976905.1 | hypothetical protein | - |
| JTC67_RS12910 (2529849) | 2529849..2530280 | - | 432 | WP_139118633.1 | hypothetical protein | - |
| JTC67_RS12915 (2530328) | 2530328..2530756 | - | 429 | WP_136503118.1 | hypothetical protein | - |
| JTC67_RS12920 (2530915) | 2530915..2531196 | - | 282 | WP_021560139.1 | hypothetical protein | - |
| JTC67_RS12925 (2531168) | 2531168..2531404 | - | 237 | WP_233679676.1 | hypothetical protein | - |
| JTC67_RS12930 (2531401) | 2531401..2531868 | - | 468 | WP_233679677.1 | glycoside hydrolase family 104 protein | - |
| JTC67_RS12935 (2531882) | 2531882..2532202 | - | 321 | WP_233679678.1 | phage holin, lambda family | - |
| JTC67_RS12940 (2532204) | 2532204..2533136 | - | 933 | WP_233679679.1 | glycosyltransferase family 9 protein | - |
| JTC67_RS12945 (2533102) | 2533102..2533674 | - | 573 | WP_000846688.1 | hypothetical protein | - |
| JTC67_RS12950 (2533813) | 2533813..2534307 | + | 495 | WP_024229507.1 | hypothetical protein | - |
| JTC67_RS12955 (2534525) | 2534525..2535076 | - | 552 | WP_021560134.1 | Rha family transcriptional regulator | - |
| JTC67_RS12960 (2535376) | 2535376..2535870 | - | 495 | WP_021560133.1 | hypothetical protein | - |
| JTC67_RS12985 (2536894) | 2536894..2537646 | - | 753 | WP_074464710.1 | antitermination protein | - |
| JTC67_RS12990 (2537660) | 2537660..2538649 | - | 990 | WP_233679680.1 | DUF968 domain-containing protein | - |
| JTC67_RS12995 (2538657) | 2538657..2539466 | - | 810 | WP_058905684.1 | KilA-N domain-containing protein | - |
| JTC67_RS13000 (2539486) | 2539486..2539875 | - | 390 | WP_100008778.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JTC67_RS13005 (2539872) | 2539872..2540198 | - | 327 | WP_042106673.1 | LexA family transcriptional regulator | - |
| JTC67_RS13010 (2540195) | 2540195..2540848 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| JTC67_RS13015 (2540848) | 2540848..2541342 | - | 495 | WP_100008813.1 | PerC family transcriptional regulator | - |
| JTC67_RS13020 (2541339) | 2541339..2542280 | - | 942 | WP_136746471.1 | helix-turn-helix domain-containing protein | - |
| JTC67_RS13025 (2542270) | 2542270..2542449 | - | 180 | WP_100008805.1 | DUF4222 domain-containing protein | - |
| JTC67_RS13030 (2542625) | 2542625..2543209 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| JTC67_RS13035 (2543237) | 2543237..2543434 | - | 198 | WP_001231956.1 | Cro/CI family transcriptional regulator | - |
| JTC67_RS13040 (2543530) | 2543530..2544183 | + | 654 | WP_136761643.1 | S24 family peptidase | - |
| JTC67_RS13045 (2544641) | 2544641..2545003 | + | 363 | WP_136746472.1 | protein YfdP | - |
| JTC67_RS13050 (2545069) | 2545069..2545893 | + | 825 | WP_000081284.1 | DUF2303 family protein | - |
| JTC67_RS13055 (2546022) | 2546022..2546558 | + | 537 | WP_000008178.1 | 5'-deoxynucleotidase | - |
| JTC67_RS13060 (2546549) | 2546549..2546911 | + | 363 | WP_001242725.1 | hypothetical protein | - |
| JTC67_RS13065 (2546911) | 2546911..2547720 | + | 810 | WP_074464833.1 | hypothetical protein | - |
| JTC67_RS13070 (2547720) | 2547720..2548292 | + | 573 | WP_024207599.1 | 3'-5' exonuclease | - |
| JTC67_RS13075 (2548329) | 2548329..2548610 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| JTC67_RS13080 (2548658) | 2548658..2548831 | - | 174 | WP_021559700.1 | hypothetical protein | - |
| JTC67_RS13085 (2548871) | 2548871..2549257 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| JTC67_RS13090 (2549287) | 2549287..2549796 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| JTC67_RS13095 (2550331) | 2550331..2550846 | + | 516 | WP_000416264.1 | zinc uptake transcriptional repressor Zur | - |
| JTC67_RS13100 (2550888) | 2550888..2551097 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| JTC67_RS13105 (2551213) | 2551213..2552538 | - | 1326 | WP_001296637.1 | MATE family efflux transporter DinF | - |
| JTC67_RS13110 (2552611) | 2552611..2553219 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| JTC67_RS13115 (2553329) | 2553329..2553697 | - | 369 | WP_000002899.1 | diacylglycerol kinase | - |
| JTC67_RS13120 (2553868) | 2553868..2556291 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| JTC67_RS13125 (2556446) | 2556446..2557318 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| JTC67_RS13130 (2557331) | 2557331..2557828 | - | 498 | WP_000019227.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|