Detailed information NTG0302827

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: DT536_RS03605
• Genome accession: NZ_CP031011
• Coordinates: 750345..751709 (+)
• Length: 454 a.a.
• NCBI ID: WP_406564419.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain LXL_C1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 745345..756709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DT536_RS03585 (DT536_03585)	thrC	745550..746689 (+)	1140	WP_058868731.1	threonine synthase	-
DT536_RS03590 (DT536_03590)	-	746776..747831 (-)	1056	WP_131772994.1	serine hydrolase	-
DT536_RS03595 (DT536_03595)	-	748047..748682 (+)	636	WP_004692836.1	response regulator	-
DT536_RS03600 (DT536_03600)	pilS	748704..750272 (+)	1569	WP_058868729.1	sensor histidine kinase	Regulator
DT536_RS03605 (DT536_03605)	pilR	750345..751709 (+)	1365	WP_406564419.1	sigma-54-dependent transcriptional regulator	Regulator
DT536_RS03610 (DT536_03610)	-	751714..752889 (-)	1176	WP_058868727.1	S41 family peptidase	-
DT536_RS03615 (DT536_03615)	gpmI	752908..754455 (-)	1548	WP_058868726.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
DT536_RS03620 (DT536_03620)	lptG	754578..755648 (-)	1071	WP_058868725.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51054.75 Da
• Isoelectric Point: 6.9739

>NTDB_id=302827 DT536_RS03605 WP_406564419.1 750345..751709(+) (pilR) [Acinetobacter johnsonii strain LXL_C1]
MQMSLSRMGIDTRIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLTLVDFIAQNYPNLPVAVLTAYGNMDVAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHKLLIGQSLPIQQLRVTLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLETLVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGTVGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=302827 DT536_RS03605 WP_406564419.1 750345..751709(+) (pilR) [Acinetobacter johnsonii strain LXL_C1]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACGTATTGCCTATCGCTTACAGGAGGCTGTTCAAGCACTTAAAAC
ACATCAATATGATGCCTGTCTGACAGATTTGAATTTACCTGATGGTAATGGATTAACGCTGGTGGATTTTATTGCTCAAA
ATTATCCTAATCTACCTGTAGCTGTATTAACTGCTTATGGCAACATGGATGTCGCGATTGCCGCATTAAAAGCGGGTGCT
TTTGATTTTGTCAGTAAACCAATCAACCAAAAGCATTTAGAGCAACTTTTACAAAAGGCCTTTAACCAGCCTATCAGCCA
GCTACATATTCAAGAAGATACGCTTGAACACAAACTGTTAATTGGTCAATCCCTTCCTATTCAACAGCTTCGTGTGACCT
TGAAAAAAATTGCCCGCTCACAGGCCCCTGTCTTTATTACAGGTGAATCAGGAACTGGTAAAGAAGTGGTGGCCAATTTG
GTACATCGCCTGAGTAACCGTAATGAAGGGCCATTTATTGCCATCAACTGTGGTGCTATCCCAACAGAACTGATGGAAAG
TGAACTATTTGGACATCGTAAAGGTAGCTTCACAGGGGCCACTCAAGACAAACAAGGGCTGATTCTCTCTGCACATGGCG
GCAGTTTATTTTTAGATGAAATTGCCGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCCATTGGGAGTGATACCGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAACACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCTCTACGTGAGC
GTGGCAATGACATTATTCTTTTGGCACAACATTTCATTCAAAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAATTTTTATTGGCCCAATATTATCCAGGTAATGTGCGTGAACTACGTAATATGATGGAACGCGC
CATCACCTTAAGTGATGAAAGCAGTATCGACTTACCACACTTGCAAACAGCCCCACTGCGACCAATTGCTCAGACTAACT
ATGCCAATGCCACCCAACAAGGTACTGTTGGCAATGATCAACTCAGTCATGTGCCTTCGCGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACTCATTGGAACAGAACACTAGC
AGCTAAAAAGCTCGGTATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGGCTAGATGGCGAAGACGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Response regulator receiver domain (Response_reg) (4-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.449	100	0.744
pilR	Pseudomonas aeruginosa PAK	49.002	99.339	0.487