Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ABLB99_RS01610 | Genome accession | NZ_CP157447 |
| Coordinates | 346036..346596 (+) | Length | 186 a.a. |
| NCBI ID | WP_079377028.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain XH1727 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 341036..351596
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLB99_RS01585 (ABLB99_01585) | - | 343177..343308 (-) | 132 | WP_102990545.1 | hypothetical protein | - |
| ABLB99_RS01590 (ABLB99_01590) | rpoZ | 343347..343625 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABLB99_RS01595 (ABLB99_01595) | gmk | 343698..344327 (-) | 630 | WP_002051739.1 | guanylate kinase | - |
| ABLB99_RS01600 (ABLB99_01600) | ispH | 344450..345400 (+) | 951 | WP_002051768.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABLB99_RS01605 (ABLB99_01605) | fimU | 345569..346042 (+) | 474 | WP_106465172.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ABLB99_RS01610 (ABLB99_01610) | pilV | 346036..346596 (+) | 561 | WP_079377028.1 | type IV pilus modification protein PilV | Machinery gene |
| ABLB99_RS01615 (ABLB99_01615) | pilW | 346596..347594 (+) | 999 | WP_004884688.1 | PilW family protein | Machinery gene |
| ABLB99_RS01620 (ABLB99_01620) | pilX | 347591..348406 (+) | 816 | WP_004711686.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 19890.00 Da Isoelectric Point: 8.2254
>NTDB_id=1006916 ABLB99_RS01610 WP_079377028.1 346036..346596(+) (pilV) [Acinetobacter nosocomialis strain XH1727]
MLMHLNNLKAQAGVGLIEVLVALILLAIGVLGYVALQIRAMDASSEALTKSQAMIVMRGLAENIRTNSVQAGQYPAFVRS
YSNFSSTTVAPTSCFNTPCTPSQLAQFDAYQTAKNADQLGIKITMTNCPGVTSTMTLQRQCLFAFWGKTLPVTSTSGSTS
TVDVSNCITSSGIYVSNSKCLMMETY
MLMHLNNLKAQAGVGLIEVLVALILLAIGVLGYVALQIRAMDASSEALTKSQAMIVMRGLAENIRTNSVQAGQYPAFVRS
YSNFSSTTVAPTSCFNTPCTPSQLAQFDAYQTAKNADQLGIKITMTNCPGVTSTMTLQRQCLFAFWGKTLPVTSTSGSTS
TVDVSNCITSSGIYVSNSKCLMMETY
Nucleotide
Download Length: 561 bp
>NTDB_id=1006916 ABLB99_RS01610 WP_079377028.1 346036..346596(+) (pilV) [Acinetobacter nosocomialis strain XH1727]
ATGCTAATGCATTTAAACAATCTGAAAGCTCAAGCAGGTGTTGGTTTAATAGAAGTTTTAGTCGCTTTAATACTACTTGC
AATAGGAGTGCTTGGTTATGTAGCACTTCAGATTAGGGCAATGGATGCATCTTCAGAAGCATTAACTAAATCTCAGGCGA
TGATAGTCATGAGGGGGTTAGCTGAAAATATTCGCACAAATAGTGTTCAAGCTGGTCAATATCCAGCATTTGTGCGTAGT
TATAGTAATTTTTCATCAACTACAGTGGCTCCGACTTCCTGCTTTAATACGCCGTGTACGCCTTCACAGCTTGCTCAATT
TGACGCATATCAAACAGCAAAAAATGCAGATCAGCTGGGTATCAAAATTACAATGACAAATTGTCCAGGCGTTACTTCAA
CTATGACTTTACAAAGGCAATGTTTATTCGCTTTTTGGGGAAAAACTTTACCAGTAACGAGTACAAGTGGGAGTACATCA
ACTGTAGATGTATCAAATTGCATCACTAGTAGTGGAATTTATGTCTCTAATTCTAAGTGTTTAATGATGGAGACATATTG
A
ATGCTAATGCATTTAAACAATCTGAAAGCTCAAGCAGGTGTTGGTTTAATAGAAGTTTTAGTCGCTTTAATACTACTTGC
AATAGGAGTGCTTGGTTATGTAGCACTTCAGATTAGGGCAATGGATGCATCTTCAGAAGCATTAACTAAATCTCAGGCGA
TGATAGTCATGAGGGGGTTAGCTGAAAATATTCGCACAAATAGTGTTCAAGCTGGTCAATATCCAGCATTTGTGCGTAGT
TATAGTAATTTTTCATCAACTACAGTGGCTCCGACTTCCTGCTTTAATACGCCGTGTACGCCTTCACAGCTTGCTCAATT
TGACGCATATCAAACAGCAAAAAATGCAGATCAGCTGGGTATCAAAATTACAATGACAAATTGTCCAGGCGTTACTTCAA
CTATGACTTTACAAAGGCAATGTTTATTCGCTTTTTGGGGAAAAACTTTACCAGTAACGAGTACAAGTGGGAGTACATCA
ACTGTAGATGTATCAAATTGCATCACTAGTAGTGGAATTTATGTCTCTAATTCTAAGTGTTTAATGATGGAGACATATTG
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
75.269 |
100 |
0.753 |
| pilV | Acinetobacter baylyi ADP1 |
35.789 |
100 |
0.366 |