Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABLB99_RS01550 | Genome accession | NZ_CP157447 |
| Coordinates | 335820..336254 (+) | Length | 144 a.a. |
| NCBI ID | WP_004884710.1 | Uniprot ID | A0AB36M203 |
| Organism | Acinetobacter nosocomialis strain XH1727 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 330820..341254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLB99_RS01530 (ABLB99_01530) | - | 332211..333098 (+) | 888 | WP_004711671.1 | metal-dependent hydrolase | - |
| ABLB99_RS01535 (ABLB99_01535) | - | 333232..333822 (+) | 591 | WP_002051712.1 | LemA family protein | - |
| ABLB99_RS01540 (ABLB99_01540) | - | 333844..334926 (+) | 1083 | WP_106465174.1 | YgcG family protein | - |
| ABLB99_RS01545 (ABLB99_01545) | - | 334920..335480 (+) | 561 | WP_004884712.1 | TPM domain-containing protein | - |
| ABLB99_RS01550 (ABLB99_01550) | pilA | 335820..336254 (+) | 435 | WP_004884710.1 | pilin | Machinery gene |
| ABLB99_RS01555 (ABLB99_01555) | - | 336314..337624 (+) | 1311 | WP_004884707.1 | O-antigen ligase | - |
| ABLB99_RS01560 (ABLB99_01560) | - | 337735..339363 (+) | 1629 | WP_106465173.1 | PglL family O-oligosaccharyltransferase | - |
| ABLB99_RS01565 (ABLB99_01565) | bfr | 339403..339867 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| ABLB99_RS01570 (ABLB99_01570) | - | 340113..340307 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABLB99_RS01575 (ABLB99_01575) | - | 340527..340910 (-) | 384 | WP_002051728.1 | RidA family protein | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14736.79 Da Isoelectric Point: 7.5909
>NTDB_id=1006914 ABLB99_RS01550 WP_004884710.1 335820..336254(+) (pilA) [Acinetobacter nosocomialis strain XH1727]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTTALTDVTALGLQQSTNAC
AVTASIGTDGTSNITCTLKGTSQINGKKIQWVRAADNATNGTTGTWSCITDVADNLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTTALTDVTALGLQQSTNAC
AVTASIGTDGTSNITCTLKGTSQINGKKIQWVRAADNATNGTTGTWSCITDVADNLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=1006914 ABLB99_RS01550 WP_004884710.1 335820..336254(+) (pilA) [Acinetobacter nosocomialis strain XH1727]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTTATGATCGTGGTTGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAGTCGCAAGTAAGTACTGGTTTAGCAGATATTACTGCTGGAAAAACAAACGCAG
AAACAAAATTGGCTGAAGGATTAACTACTGCATTAACTGATGTAACTGCTTTAGGCTTACAACAATCTACGAATGCTTGT
GCTGTTACAGCGAGTATTGGTACTGATGGTACCAGTAACATTACATGTACTTTGAAAGGAACATCTCAAATTAATGGGAA
AAAAATTCAGTGGGTACGTGCTGCAGATAATGCAACAAATGGTACAACTGGAACTTGGAGTTGTATAACAGATGTAGCTG
ATAACTTACGTCCTAAATCATGTGGCGCATCATAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTTATGATCGTGGTTGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAAAACTATATTGCTAAGTCGCAAGTAAGTACTGGTTTAGCAGATATTACTGCTGGAAAAACAAACGCAG
AAACAAAATTGGCTGAAGGATTAACTACTGCATTAACTGATGTAACTGCTTTAGGCTTACAACAATCTACGAATGCTTGT
GCTGTTACAGCGAGTATTGGTACTGATGGTACCAGTAACATTACATGTACTTTGAAAGGAACATCTCAAATTAATGGGAA
AAAAATTCAGTGGGTACGTGCTGCAGATAATGCAACAAATGGTACAACTGGAACTTGGAGTTGTATAACAGATGTAGCTG
ATAACTTACGTCCTAAATCATGTGGCGCATCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
52.027 |
100 |
0.535 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.333 |
100 |
0.472 |
| pilA | Vibrio cholerae strain A1552 |
45.333 |
100 |
0.472 |
| pilA | Vibrio cholerae C6706 |
45.333 |
100 |
0.472 |
| pilA | Pseudomonas aeruginosa PAK |
43.506 |
100 |
0.465 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
46.479 |
98.611 |
0.458 |
| comP | Acinetobacter baylyi ADP1 |
41.722 |
100 |
0.438 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
44.681 |
97.917 |
0.438 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
43.651 |
87.5 |
0.382 |