Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ABC804_RS01430 | Genome accession | NZ_CP155536 |
| Coordinates | 266023..266976 (+) | Length | 317 a.a. |
| NCBI ID | WP_000345099.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain M264-3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 261023..271976
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC804_RS01385 (ABC804_01385) | - | 261080..261445 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| ABC804_RS01390 (ABC804_01390) | comGA/cglA/cilD | 261521..262462 (+) | 942 | WP_000249552.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABC804_RS01395 (ABC804_01395) | comGB/cglB | 262410..263426 (+) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABC804_RS01400 (ABC804_01400) | comGC/cglC | 263428..263754 (+) | 327 | WP_000738636.1 | comG operon protein ComGC | Machinery gene |
| ABC804_RS01405 (ABC804_01405) | comGD/cglD | 263747..264151 (+) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABC804_RS01410 (ABC804_01410) | comGE/cglE | 264114..264416 (+) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABC804_RS01415 (ABC804_01415) | comGF/cglF | 264379..264840 (+) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABC804_RS01420 (ABC804_01420) | comGG/cglG | 264818..265231 (+) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABC804_RS01425 (ABC804_01425) | - | 265368..265962 (+) | 595 | Protein_258 | methyltransferase domain-containing protein | - |
| ABC804_RS01430 (ABC804_01430) | comYH | 266023..266976 (+) | 954 | WP_000345099.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABC804_RS01435 (ABC804_01435) | - | 267027..268217 (+) | 1191 | WP_000167765.1 | acetate kinase | - |
| ABC804_RS01440 (ABC804_01440) | - | 268218..268349 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| ABC804_RS01445 (ABC804_01445) | rnpA | 268366..268737 (+) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
| ABC804_RS01450 (ABC804_01450) | - | 268712..269536 (+) | 825 | WP_001809383.1 | membrane protein insertase YidC | - |
| ABC804_RS01455 (ABC804_01455) | jag | 269555..270541 (+) | 987 | WP_000260014.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ABC804_RS01460 (ABC804_01460) | - | 270592..271215 (+) | 624 | WP_000932635.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35718.89 Da Isoelectric Point: 4.2474
>NTDB_id=997402 ABC804_RS01430 WP_000345099.1 266023..266976(+) (comYH) [Streptococcus pneumoniae strain M264-3]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKDNNQTLKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLTKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVKDNNQTLKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLTKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=997402 ABC804_RS01430 WP_000345099.1 266023..266976(+) (comYH) [Streptococcus pneumoniae strain M264-3]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAGACTGAGCTAGAACAGGTCAAAGACAACAATC
AGACCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTACTTTTGGTGTTTATTGTGGAAGAGCTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTTTGGGCGCTACTTTCTTGACCTCGCTTACTAAAA
AGGTGGATTATTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAGACTGAGCTAGAACAGGTCAAAGACAACAATC
AGACCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTACTTTTGGTGTTTATTGTGGAAGAGCTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTTTGGGCGCTACTTTCTTGACCTCGCTTACTAAAA
AGGTGGATTATTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
54.952 |
98.738 |
0.543 |
| comYH | Streptococcus mutans UA159 |
54.633 |
98.738 |
0.539 |